1 | |
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2 | #include "nc4_data_output.hpp" |
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3 | |
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4 | #include <boost/lexical_cast.hpp> |
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5 | #include "attribute_template.hpp" |
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6 | #include "group_template.hpp" |
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7 | |
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8 | #include "file.hpp" |
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9 | #include "calendar.hpp" |
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10 | #include "context.hpp" |
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11 | #include "context_server.hpp" |
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12 | |
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13 | namespace xios |
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14 | { |
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15 | /// ////////////////////// Définitions ////////////////////// /// |
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16 | CNc4DataOutput::CNc4DataOutput |
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17 | (const StdString & filename, bool exist) |
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18 | : SuperClass() |
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19 | , SuperClassWriter(filename, exist) |
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20 | , filename(filename) |
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21 | { |
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22 | StdString timeid = StdString("time_counter"); |
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23 | SuperClass::type = MULTI_FILE; |
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24 | if (!exist) |
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25 | SuperClassWriter::addDimension(timeid); |
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26 | } |
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27 | |
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28 | CNc4DataOutput::CNc4DataOutput |
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29 | (const StdString & filename, bool exist, MPI_Comm comm_server,bool multifile, bool isCollective) |
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30 | : SuperClass() |
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31 | , SuperClassWriter(filename, exist, &comm_server,multifile) |
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32 | , comm_server(comm_server) |
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33 | , filename(filename) |
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34 | , isCollective(isCollective) |
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35 | { |
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36 | StdString timeid = StdString("time_counter"); |
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37 | |
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38 | SuperClass::type = (multifile) ? MULTI_FILE : ONE_FILE; |
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39 | |
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40 | if (!exist) |
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41 | SuperClassWriter::addDimension(timeid); |
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42 | } |
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43 | |
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44 | |
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45 | CNc4DataOutput::~CNc4DataOutput(void) |
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46 | { /* Ne rien faire de plus */ } |
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47 | |
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48 | ///-------------------------------------------------------------- |
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49 | |
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50 | const StdString & CNc4DataOutput::getFileName(void) const |
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51 | { |
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52 | return (this->filename); |
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53 | } |
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54 | |
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55 | //--------------------------------------------------------------- |
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56 | |
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57 | void CNc4DataOutput::writeDomain_(CDomain* domain) |
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58 | { |
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59 | CContext* context = CContext::getCurrent() ; |
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60 | CContextServer* server=context->server ; |
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61 | |
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62 | if (domain->IsWritten(this->filename)) return; |
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63 | domain->checkAttributes(); |
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64 | |
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65 | if (domain->isEmpty()) |
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66 | if (SuperClass::type==MULTI_FILE) return ; |
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67 | |
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68 | std::vector<StdString> dim0, dim1; |
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69 | StdString domid = (!domain->name.isEmpty()) |
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70 | ? domain->name.getValue() : domain->getId(); |
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71 | StdString appendDomid = (singleDomain) ? "" : "_"+domid ; |
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72 | |
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73 | StdString lonid = StdString("lon").append(appendDomid); |
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74 | StdString latid = StdString("lat").append(appendDomid); |
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75 | StdString lonid_loc = (server->intraCommSize > 1) |
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76 | ? StdString("lon").append(appendDomid).append("_local") |
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77 | : lonid; |
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78 | StdString latid_loc = (server->intraCommSize > 1) |
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79 | ? StdString("lat").append(appendDomid).append("_local") |
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80 | : latid; |
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81 | // supress mask StdString maskid = StdString("mask_").append(domid).append("_local"); |
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82 | |
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83 | // supress mask ARRAY(int, 2) mask = domain->getLocalMask(); |
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84 | |
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85 | // unsigned int ssize = domain->zoom_ni_loc.getValue() * domain->zoom_nj_loc.getValue(); |
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86 | // bool isCurvilinear = (domain->lonvalue.getValue()->size() == ssize); |
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87 | bool isCurvilinear = true ; //for moment |
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88 | |
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89 | switch (SuperClass::type) |
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90 | { |
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91 | case (MULTI_FILE) : |
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92 | { |
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93 | // if (domain->isEmpty()) return; |
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94 | |
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95 | if (server->intraCommSize > 1) |
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96 | { |
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97 | SuperClassWriter::addDimension(lonid, domain->zoom_ni.getValue()); |
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98 | SuperClassWriter::addDimension(latid, domain->zoom_nj.getValue()); |
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99 | } |
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100 | |
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101 | if (isCurvilinear) |
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102 | { |
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103 | dim0.push_back(latid_loc); dim0.push_back(lonid_loc); |
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104 | lonid = StdString("nav_lon").append(appendDomid); |
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105 | latid = StdString("nav_lat").append(appendDomid); |
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106 | } |
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107 | else |
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108 | { |
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109 | dim0.push_back(latid_loc); |
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110 | dim1.push_back(lonid_loc); |
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111 | } |
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112 | |
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113 | SuperClassWriter::addDimension(lonid_loc, domain->zoom_ni_srv); |
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114 | SuperClassWriter::addDimension(latid_loc, domain->zoom_nj_srv); |
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115 | if (server->intraCommSize > 1) |
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116 | { |
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117 | this->writeLocalAttributes(domain->zoom_ibegin_srv, |
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118 | domain->zoom_ni_srv, |
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119 | domain->zoom_jbegin_srv, |
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120 | domain->zoom_nj_srv, |
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121 | appendDomid); |
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122 | } |
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123 | |
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124 | if (isCurvilinear) |
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125 | { |
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126 | SuperClassWriter::addVariable(latid, NC_FLOAT, dim0); |
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127 | SuperClassWriter::addVariable(lonid, NC_FLOAT, dim0); |
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128 | } |
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129 | else |
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130 | { |
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131 | SuperClassWriter::addVariable(latid, NC_FLOAT, dim0); |
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132 | SuperClassWriter::addVariable(lonid, NC_FLOAT, dim1); |
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133 | } |
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134 | this->writeAxisAttributes |
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135 | (lonid, "X", "longitude", "Longitude", "degrees_east", domid); |
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136 | this->writeAxisAttributes |
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137 | (latid, "Y", "latitude", "Latitude", "degrees_north", domid); |
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138 | |
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139 | dim0.clear(); |
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140 | dim0.push_back(latid_loc); |
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141 | dim0.push_back(lonid_loc); |
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142 | |
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143 | |
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144 | // supress mask if (server->intraCommSize > 1) |
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145 | // supress mask { |
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146 | // supress mask SuperClassWriter::addVariable(maskid, NC_INT, dim0); |
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147 | // supress mask |
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148 | // supress mask this->writeMaskAttributes(maskid, |
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149 | // supress mask domain->data_dim.getValue()/*, |
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150 | // supress mask domain->data_ni.getValue(), |
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151 | // supress mask domain->data_nj.getValue(), |
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152 | // supress mask domain->data_ibegin.getValue(), |
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153 | // supress mask domain->data_jbegin.getValue()*/); |
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154 | // supress mask } |
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155 | |
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156 | //SuperClassWriter::setDefaultValue(maskid, &dvm); |
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157 | |
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158 | SuperClassWriter::definition_end(); |
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159 | SuperClassWriter::writeData(domain->latvalue_srv, latid, isCollective, 0); |
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160 | SuperClassWriter::writeData(domain->lonvalue_srv, lonid, isCollective, 0); |
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161 | // supress mask if (server->intraCommSize > 1) SuperClassWriter::writeData(mask, maskid); |
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162 | SuperClassWriter::definition_start(); |
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163 | |
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164 | break; |
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165 | } |
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166 | case (ONE_FILE) : |
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167 | { |
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168 | SuperClassWriter::addDimension(lonid, domain->zoom_ni.getValue()); |
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169 | SuperClassWriter::addDimension(latid, domain->zoom_nj.getValue()); |
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170 | |
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171 | |
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172 | if (isCurvilinear) |
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173 | { |
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174 | dim0.push_back(latid); dim0.push_back(lonid); |
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175 | lonid = StdString("nav_lon").append(appendDomid); |
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176 | latid = StdString("nav_lat").append(appendDomid); |
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177 | SuperClassWriter::addVariable(latid, NC_FLOAT, dim0); |
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178 | SuperClassWriter::addVariable(lonid, NC_FLOAT, dim0); |
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179 | } |
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180 | else |
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181 | { |
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182 | dim0.push_back(latid); |
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183 | dim1.push_back(lonid); |
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184 | SuperClassWriter::addVariable(latid, NC_FLOAT, dim0); |
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185 | SuperClassWriter::addVariable(lonid, NC_FLOAT, dim1); |
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186 | } |
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187 | this->writeAxisAttributes |
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188 | (latid, "X", "longitude", "Longitude", "degrees_east", domid); |
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189 | this->writeAxisAttributes |
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190 | (lonid, "Y", "latitude", "Latitude", "degrees_north", domid); |
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191 | |
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192 | |
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193 | SuperClassWriter::definition_end(); |
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194 | std::vector<StdSize> start(2) ; |
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195 | std::vector<StdSize> count(2) ; |
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196 | if (domain->isEmpty()) |
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197 | { |
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198 | start[0]=0 ; start [1]=0 ; |
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199 | count[0]=0 ; count[1]=0 ; |
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200 | } |
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201 | else |
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202 | { |
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203 | start[1]=domain->zoom_ibegin_srv-domain->zoom_ibegin.getValue() ; start [0]=domain->zoom_jbegin_srv-domain->zoom_jbegin.getValue() ; |
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204 | count[1]=domain->zoom_ni_srv ; count[0]=domain->zoom_nj_srv ; |
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205 | } |
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206 | |
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207 | SuperClassWriter::writeData(domain->latvalue_srv, latid, isCollective, 0,&start,&count); |
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208 | SuperClassWriter::writeData(domain->lonvalue_srv, lonid, isCollective, 0,&start,&count); |
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209 | SuperClassWriter::definition_start(); |
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210 | |
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211 | break; |
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212 | } |
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213 | default : |
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214 | ERROR("CNc4DataOutput::writeDomain(domain)", |
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215 | << "[ type = " << SuperClass::type << "]" |
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216 | << " not implemented yet !"); |
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217 | } |
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218 | domain->addRelFile(this->filename); |
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219 | } |
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220 | |
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221 | //-------------------------------------------------------------- |
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222 | |
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223 | void CNc4DataOutput::writeAxis_(CAxis* axis) |
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224 | { |
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225 | if (axis->IsWritten(this->filename)) return; |
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226 | axis->checkAttributes(); |
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227 | StdSize zoom_size=axis->zoom_size.getValue() ; |
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228 | StdSize zoom_begin=axis->zoom_begin.getValue()-1 ; |
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229 | |
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230 | std::vector<StdString> dims; |
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231 | StdString axisid = (!axis->name.isEmpty()) |
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232 | ? axis->name.getValue() : axis->getId(); |
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233 | SuperClassWriter::addDimension(axisid, zoom_size); |
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234 | dims.push_back(axisid); |
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235 | |
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236 | switch (SuperClass::type) |
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237 | { |
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238 | case (MULTI_FILE ) : |
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239 | {} |
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240 | case (ONE_FILE) : |
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241 | { |
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242 | SuperClassWriter::addVariable(axisid, NC_FLOAT, dims); |
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243 | |
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244 | SuperClassWriter::addAttribute("axis", StdString("Z"), &axisid); |
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245 | |
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246 | if (!axis->standard_name.isEmpty()) |
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247 | SuperClassWriter::addAttribute |
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248 | ("standard_name", axis->standard_name.getValue(), &axisid); |
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249 | |
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250 | if (!axis->long_name.isEmpty()) |
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251 | SuperClassWriter::addAttribute |
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252 | ("long_name", axis->long_name.getValue(), &axisid); |
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253 | |
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254 | if (!axis->unit.isEmpty()) |
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255 | SuperClassWriter::addAttribute |
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256 | ("units", axis->unit.getValue(), &axisid); |
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257 | |
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258 | SuperClassWriter::definition_end(); |
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259 | |
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260 | ARRAY(double,1) axis_value=axis->value.getValue() ; |
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261 | ARRAY_CREATE(value,double,1,[zoom_size]) ; |
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262 | for(StdSize i = 0 ; i < zoom_size ; i++) (*value)[i]=(*axis_value)[i+zoom_begin] ; |
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263 | SuperClassWriter::writeData(value, axisid, isCollective, 0); |
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264 | |
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265 | SuperClassWriter::definition_start(); |
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266 | |
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267 | break; |
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268 | } |
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269 | default : |
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270 | ERROR("CNc4DataOutput::writeDomain(domain)", |
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271 | << "[ type = " << SuperClass::type << "]" |
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272 | << " not implemented yet !"); |
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273 | } |
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274 | axis->addRelFile(this->filename); |
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275 | } |
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276 | |
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277 | //-------------------------------------------------------------- |
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278 | |
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279 | void CNc4DataOutput::writeField_(CField* field) |
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280 | { |
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281 | CContext* context = CContext::getCurrent() ; |
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282 | CContextServer* server=context->server ; |
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283 | |
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284 | std::vector<StdString> dims, coodinates; |
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285 | CGrid* grid = field->grid; |
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286 | CDomain* domain = grid->domain; |
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287 | |
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288 | if (domain->isEmpty()) |
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289 | if (SuperClass::type==MULTI_FILE) return ; |
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290 | |
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291 | StdString timeid = StdString("time_counter"); |
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292 | StdString domid = (!domain->name.isEmpty()) |
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293 | ? domain->name.getValue() : domain->getId(); |
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294 | StdString appendDomid = (singleDomain) ? "" : "_"+domid ; |
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295 | |
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296 | StdString lonid = StdString("lon").append(appendDomid); |
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297 | StdString latid = StdString("lat").append(appendDomid); |
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298 | StdString lonid_loc = (server->intraCommSize > 1) |
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299 | ? StdString("lon").append(appendDomid).append("_local") |
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300 | : lonid; |
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301 | StdString latid_loc = (server->intraCommSize > 1) |
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302 | ? StdString("lat").append(appendDomid).append("_local") |
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303 | : latid; |
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304 | StdString fieldid = (!field->name.isEmpty()) |
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305 | ? field->name.getValue() : field->getBaseFieldReference()->getId(); |
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306 | |
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307 | // unsigned int ssize = domain->zoom_ni_loc.getValue() * domain->zoom_nj_loc.getValue(); |
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308 | // bool isCurvilinear = (domain->lonvalue.getValue()->size() == ssize); |
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309 | bool isCurvilinear = true ; // for moment |
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310 | |
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311 | nc_type type = (!field->prec.isEmpty() && |
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312 | ( field->prec.getValue() == 4)) |
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313 | ? NC_FLOAT : NC_DOUBLE; |
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314 | bool wtime = !(!field->operation.isEmpty() && |
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315 | ( field->operation.getValue().compare("once") == 0)); |
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316 | |
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317 | if (wtime) |
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318 | { |
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319 | StdOStringStream oss; |
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320 | oss << "time_" << field->operation.getValue() |
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321 | << "_" << field->getRelFile()->output_freq.getValue(); |
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322 | |
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323 | coodinates.push_back(oss.str()); |
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324 | dims.push_back(timeid); |
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325 | } |
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326 | |
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327 | if (!grid->axis_ref.isEmpty()) |
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328 | { |
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329 | CAxis* axis = grid->axis ; |
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330 | StdString axisid = (!axis->name.isEmpty()) ? axis->name.getValue() : axis->getId(); |
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331 | dims.push_back(axisid); |
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332 | coodinates.push_back(axisid); |
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333 | } |
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334 | |
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335 | if (isCurvilinear) |
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336 | { |
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337 | coodinates.push_back(StdString("nav_lat").append(appendDomid)); |
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338 | coodinates.push_back(StdString("nav_lon").append(appendDomid)); |
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339 | } |
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340 | else |
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341 | { |
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342 | coodinates.push_back(latid); |
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343 | coodinates.push_back(lonid); |
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344 | } |
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345 | |
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346 | switch (SuperClass::type) |
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347 | { |
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348 | case (MULTI_FILE) : |
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349 | { |
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350 | dims.push_back(latid_loc); |
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351 | dims.push_back(lonid_loc); |
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352 | break ; |
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353 | } |
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354 | case (ONE_FILE) : |
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355 | { |
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356 | dims.push_back(latid); |
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357 | dims.push_back(lonid); |
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358 | break; |
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359 | } |
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360 | default : |
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361 | ERROR("CNc4DataOutput::writeDomain(domain)", |
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362 | << "[ type = " << SuperClass::type << "]" |
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363 | << " not implemented yet !"); |
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364 | } |
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365 | |
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366 | SuperClassWriter::addVariable(fieldid, type, dims); |
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367 | |
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368 | if (!field->standard_name.isEmpty()) |
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369 | SuperClassWriter::addAttribute |
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370 | ("standard_name", field->standard_name.getValue(), &fieldid); |
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371 | |
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372 | if (!field->long_name.isEmpty()) |
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373 | SuperClassWriter::addAttribute |
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374 | ("long_name", field->long_name.getValue(), &fieldid); |
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375 | |
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376 | if (!field->unit.isEmpty()) |
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377 | SuperClassWriter::addAttribute |
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378 | ("units", field->unit.getValue(), &fieldid); |
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379 | |
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380 | SuperClassWriter::addAttribute |
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381 | ("online_operation", field->operation.getValue(), &fieldid); |
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382 | |
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383 | if (wtime) |
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384 | { |
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385 | SuperClassWriter::addAttribute |
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386 | ("interval_operation", field->freq_op.getValue(), &fieldid); |
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387 | SuperClassWriter::addAttribute |
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388 | ("interval_write", field->getRelFile()->output_freq.getValue(), &fieldid); |
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389 | } |
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390 | |
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391 | if (!field->default_value.isEmpty()) |
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392 | { |
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393 | double default_value = field->default_value.getValue(); |
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394 | float fdefault_value = (float)default_value; |
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395 | if (type == NC_DOUBLE) |
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396 | SuperClassWriter::setDefaultValue(fieldid, &default_value); |
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397 | else |
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398 | SuperClassWriter::setDefaultValue(fieldid, &fdefault_value); |
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399 | } |
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400 | else |
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401 | { |
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402 | double * default_value = NULL; |
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403 | SuperClassWriter::setDefaultValue(fieldid, default_value); |
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404 | } |
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405 | |
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406 | { // Ecriture des coordonnées |
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407 | |
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408 | StdString coordstr; //boost::algorithm::join(coodinates, " ") |
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409 | std::vector<StdString>::iterator |
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410 | itc = coodinates.begin(), endc = coodinates.end(); |
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411 | |
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412 | for (; itc!= endc; itc++) |
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413 | { |
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414 | StdString & coord = *itc; |
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415 | if (itc+1 != endc) |
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416 | coordstr.append(coord).append(" "); |
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417 | else coordstr.append(coord); |
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418 | } |
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419 | |
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420 | SuperClassWriter::addAttribute("coordinates", coordstr, &fieldid); |
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421 | |
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422 | } |
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423 | |
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424 | } |
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425 | |
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426 | //-------------------------------------------------------------- |
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427 | |
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428 | void CNc4DataOutput::writeFile_ (CFile* file) |
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429 | { |
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430 | StdString filename = (!file->name.isEmpty()) |
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431 | ? file->name.getValue() : file->getId(); |
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432 | StdString description = (!file->description.isEmpty()) |
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433 | ? file->description.getValue() |
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434 | : StdString("Created by xios"); |
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435 | this->writeFileAttributes(filename, description, |
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436 | StdString ("CF-1.1"), |
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437 | StdString("An IPSL model"), |
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438 | this->getTimeStamp()); |
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439 | if (file->nbDomain==1) singleDomain=true ; |
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440 | else singleDomain=false ; |
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441 | } |
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442 | |
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443 | void CNc4DataOutput::syncFile_ (void) |
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444 | { |
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445 | SuperClassWriter::sync() ; |
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446 | } |
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447 | |
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448 | void CNc4DataOutput::closeFile_ (void) |
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449 | { |
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450 | SuperClassWriter::close() ; |
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451 | } |
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452 | |
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453 | //--------------------------------------------------------------- |
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454 | |
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455 | StdString CNc4DataOutput::getTimeStamp(void) const |
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456 | { |
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457 | const int buffer_size = 100; |
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458 | time_t rawtime; |
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459 | struct tm * timeinfo = NULL; |
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460 | char buffer [buffer_size]; |
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461 | |
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462 | time ( &rawtime ); |
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463 | timeinfo = localtime ( &rawtime ); |
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464 | strftime (buffer, buffer_size, "%Y-%b-%d %H:%M:%S %Z", timeinfo); |
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465 | |
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466 | return (StdString(buffer)); |
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467 | } |
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468 | |
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469 | //--------------------------------------------------------------- |
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470 | |
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471 | void CNc4DataOutput::writeFieldData_ (CField* field) |
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472 | { |
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473 | CContext* context = CContext::getCurrent() ; |
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474 | // if (field->getRelFile()->isSyncTime()) SuperClassWriter::sync() ; |
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475 | |
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476 | CGrid* grid = field->grid ; |
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477 | CDomain* domain = grid->domain ; |
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478 | |
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479 | if(SuperClass::type==MULTI_FILE || !isCollective) if (domain->isEmpty()) return; |
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480 | |
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481 | |
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482 | StdString fieldid = (!field->name.isEmpty()) |
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483 | ? field->name.getValue() |
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484 | : field->getBaseFieldReference()->getId(); |
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485 | |
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486 | StdOStringStream oss; |
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487 | oss << "time_" << field->operation.getValue() |
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488 | << "_" << field->getRelFile()->output_freq.getValue(); |
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489 | |
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490 | // ARRAY(double, 1) field_data = field->data_srv; |
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491 | ARRAY_CREATE(time_data, double, 1, [1]); |
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492 | if (field->operation.getValue()=="instant") (*time_data)[0] = Time(*field->last_Write_srv) |
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493 | -Time(context->calendar->getTimeOrigin()); |
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494 | else (*time_data)[0] = (Time(*field->last_Write_srv)+Time(*field->lastlast_Write_srv))/2 |
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495 | -Time(context->calendar->getTimeOrigin()); |
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496 | |
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497 | if (grid->hasAxis()) // 3D |
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498 | { |
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499 | CAxis* axis = grid->axis ; |
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500 | ARRAY_CREATE(field_data3D,double,3,[domain->zoom_ni_srv][domain->zoom_nj_srv][axis->zoom_size.getValue()]) ; |
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501 | field->outputField(field_data3D); |
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502 | switch (SuperClass::type) |
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503 | { |
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504 | case (MULTI_FILE) : |
---|
505 | { |
---|
506 | SuperClassWriter::writeData(field_data3D, fieldid, isCollective, field->getNStep()-1); |
---|
507 | SuperClassWriter::writeData(time_data, oss.str(), isCollective, field->getNStep()-1); |
---|
508 | break ; |
---|
509 | } |
---|
510 | case (ONE_FILE) : |
---|
511 | { |
---|
512 | std::vector<StdSize> start(3) ; |
---|
513 | std::vector<StdSize> count(3) ; |
---|
514 | if (domain->isEmpty()) |
---|
515 | { |
---|
516 | start[0]=0 ; start[1]=0 ; start[2]=0 ; |
---|
517 | count[0]=0 ; count[1]=0 ; start[2]=0 ; |
---|
518 | } |
---|
519 | else |
---|
520 | { |
---|
521 | // start[2]=domain->zoom_ibegin_loc.getValue()-domain->zoom_ibegin.getValue() ; start [1]=domain->zoom_jbegin_loc.getValue()-domain->zoom_jbegin.getValue() ; start[0]=0 ; |
---|
522 | start[2]=domain->zoom_ibegin_srv-domain->zoom_ibegin.getValue() ; start [1]=domain->zoom_jbegin_srv-domain->zoom_jbegin.getValue() ; start[0]=0 ; |
---|
523 | count[2]=domain->zoom_ni_srv ; count[1]=domain->zoom_nj_srv ; count[0] = axis->zoom_size.getValue(); |
---|
524 | } |
---|
525 | SuperClassWriter::writeData(field_data3D, fieldid, isCollective, field->getNStep()-1,&start,&count ); |
---|
526 | SuperClassWriter::writeData(time_data, oss.str(), isCollective, field->getNStep()-1 ); |
---|
527 | break; |
---|
528 | } |
---|
529 | } |
---|
530 | |
---|
531 | } |
---|
532 | else // 2D |
---|
533 | { |
---|
534 | ARRAY_CREATE(field_data2D,double,2,[domain->zoom_ni_srv][domain->zoom_nj_srv]) ; |
---|
535 | field->outputField(field_data2D); |
---|
536 | switch (SuperClass::type) |
---|
537 | { |
---|
538 | case (MULTI_FILE) : |
---|
539 | { |
---|
540 | SuperClassWriter::writeData(field_data2D, fieldid, isCollective, field->getNStep()-1); |
---|
541 | SuperClassWriter::writeData(time_data, oss.str(), isCollective, field->getNStep()-1); |
---|
542 | break; |
---|
543 | } |
---|
544 | case (ONE_FILE) : |
---|
545 | { |
---|
546 | std::vector<StdSize> start(2) ; |
---|
547 | std::vector<StdSize> count(2) ; |
---|
548 | if (domain->isEmpty()) |
---|
549 | { |
---|
550 | start[0]=0 ; start[1]=0 ; |
---|
551 | count[0]=0 ; count[1]=0 ; |
---|
552 | } |
---|
553 | else |
---|
554 | { |
---|
555 | start[1]=domain->zoom_ibegin_srv-domain->zoom_ibegin.getValue() ; start[0]=domain->zoom_jbegin_srv-domain->zoom_jbegin.getValue() ; |
---|
556 | count[1]=domain->zoom_ni_srv ; count[0]=domain->zoom_nj_srv ; |
---|
557 | } |
---|
558 | |
---|
559 | SuperClassWriter::writeData(field_data2D, fieldid, isCollective, field->getNStep()-1,&start,&count); |
---|
560 | SuperClassWriter::writeData(time_data, oss.str(), isCollective, field->getNStep()-1); |
---|
561 | break; |
---|
562 | |
---|
563 | } |
---|
564 | } |
---|
565 | } |
---|
566 | } |
---|
567 | |
---|
568 | //--------------------------------------------------------------- |
---|
569 | |
---|
570 | void CNc4DataOutput::writeTimeAxis_ |
---|
571 | (CField* field, |
---|
572 | const boost::shared_ptr<CCalendar> cal) |
---|
573 | { |
---|
574 | StdOStringStream oss; |
---|
575 | oss << "time_" << field->operation.getValue() |
---|
576 | << "_" << field->getRelFile()->output_freq.getValue(); |
---|
577 | |
---|
578 | std::vector<StdString> dims; |
---|
579 | StdString axisid = oss.str(); |
---|
580 | StdString timeid = StdString("time_counter"); |
---|
581 | |
---|
582 | dims.push_back(timeid); |
---|
583 | if (!SuperClassWriter::varExist(axisid)) |
---|
584 | { |
---|
585 | SuperClassWriter::addVariable(axisid, NC_DOUBLE, dims); |
---|
586 | CDate timeOrigin=cal->getTimeOrigin() ; |
---|
587 | // StdOStringStream oss2; |
---|
588 | // oss2<<initDate.getYear()<<"-"<<initDate.getMonth()<<"-"<<initDate.getDay()<<" " |
---|
589 | // <<initDate.getHour()<<"-"<<initDate.getMinute()<<"-"<<initDate.getSecond() ; |
---|
590 | // StdString strInitdate=oss2.str() ; |
---|
591 | StdString strTimeOrigin=timeOrigin.toString() ; |
---|
592 | this->writeTimeAxisAttributes |
---|
593 | (axisid, cal->getType(), |
---|
594 | StdString("seconds since ").append(strTimeOrigin), |
---|
595 | strTimeOrigin); |
---|
596 | } |
---|
597 | |
---|
598 | } |
---|
599 | |
---|
600 | //--------------------------------------------------------------- |
---|
601 | |
---|
602 | void CNc4DataOutput::writeTimeAxisAttributes(const StdString & axis_name, |
---|
603 | const StdString & calendar, |
---|
604 | const StdString & units, |
---|
605 | const StdString & time_origin, |
---|
606 | const StdString & standard_name, |
---|
607 | const StdString & long_name, |
---|
608 | const StdString & title) |
---|
609 | { |
---|
610 | SuperClassWriter::addAttribute("standard_name", standard_name, &axis_name); |
---|
611 | SuperClassWriter::addAttribute("long_name", long_name , &axis_name); |
---|
612 | SuperClassWriter::addAttribute("title", title , &axis_name); |
---|
613 | SuperClassWriter::addAttribute("calendar", calendar , &axis_name); |
---|
614 | SuperClassWriter::addAttribute("units", units , &axis_name); |
---|
615 | SuperClassWriter::addAttribute("time_origin", time_origin , &axis_name); |
---|
616 | } |
---|
617 | |
---|
618 | //--------------------------------------------------------------- |
---|
619 | |
---|
620 | void CNc4DataOutput::writeAxisAttributes(const StdString & axis_name, |
---|
621 | const StdString & axis, |
---|
622 | const StdString & standard_name, |
---|
623 | const StdString & long_name, |
---|
624 | const StdString & units, |
---|
625 | const StdString & nav_model) |
---|
626 | { |
---|
627 | SuperClassWriter::addAttribute("axis" , axis , &axis_name); |
---|
628 | SuperClassWriter::addAttribute("standard_name", standard_name, &axis_name); |
---|
629 | SuperClassWriter::addAttribute("long_name" , long_name , &axis_name); |
---|
630 | SuperClassWriter::addAttribute("units" , units , &axis_name); |
---|
631 | SuperClassWriter::addAttribute("nav_model" , nav_model , &axis_name); |
---|
632 | } |
---|
633 | |
---|
634 | //--------------------------------------------------------------- |
---|
635 | |
---|
636 | void CNc4DataOutput::writeLocalAttributes |
---|
637 | (int ibegin, int ni, int jbegin, int nj, StdString domid) |
---|
638 | { |
---|
639 | SuperClassWriter::addAttribute(StdString("ibegin").append(domid), ibegin); |
---|
640 | SuperClassWriter::addAttribute(StdString("ni" ).append(domid), ni); |
---|
641 | SuperClassWriter::addAttribute(StdString("jbegin").append(domid), jbegin); |
---|
642 | SuperClassWriter::addAttribute(StdString("nj" ).append(domid), nj); |
---|
643 | } |
---|
644 | |
---|
645 | //--------------------------------------------------------------- |
---|
646 | |
---|
647 | void CNc4DataOutput:: writeFileAttributes(const StdString & name, |
---|
648 | const StdString & description, |
---|
649 | const StdString & conventions, |
---|
650 | const StdString & production, |
---|
651 | const StdString & timeStamp) |
---|
652 | { |
---|
653 | SuperClassWriter::addAttribute("name" , name); |
---|
654 | SuperClassWriter::addAttribute("description", description); |
---|
655 | SuperClassWriter::addAttribute("conventions", conventions); |
---|
656 | SuperClassWriter::addAttribute("production" , production); |
---|
657 | SuperClassWriter::addAttribute("timeStamp" , timeStamp); |
---|
658 | } |
---|
659 | |
---|
660 | //--------------------------------------------------------------- |
---|
661 | |
---|
662 | void CNc4DataOutput::writeMaskAttributes(const StdString & mask_name, |
---|
663 | int data_dim, |
---|
664 | int data_ni, |
---|
665 | int data_nj, |
---|
666 | int data_ibegin, |
---|
667 | int data_jbegin) |
---|
668 | { |
---|
669 | SuperClassWriter::addAttribute("data_dim" , data_dim , &mask_name); |
---|
670 | SuperClassWriter::addAttribute("data_ni" , data_ni , &mask_name); |
---|
671 | SuperClassWriter::addAttribute("data_nj" , data_nj , &mask_name); |
---|
672 | SuperClassWriter::addAttribute("data_ibegin", data_ibegin, &mask_name); |
---|
673 | SuperClassWriter::addAttribute("data_jbegin", data_jbegin, &mask_name); |
---|
674 | } |
---|
675 | |
---|
676 | ///-------------------------------------------------------------- |
---|
677 | |
---|
678 | } // namespace xios |
---|