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Changeset 10146 for NEMO/trunk/doc/latex/NEMO/main – NEMO

Ignore:
Timestamp:
2018-09-20T18:06:07+02:00 (6 years ago)
Author:
nicolasmartin
Message:

Reorganisation for future addition of .rst files from users wiki extraction

  • Create root directories latex and rst for tidy up
  • Move namelists folder to the root with the aim to gather later all namelist groups here (OCE, ICE & TOP) Also building scripts have been modified so that figures is now expected to be present at the root
  • Create bin directory with namelist utilities (check and update)
  • Under rst, add 4 dummy files that would gather the whole documentation existing currently in users wiki
    • model_interfacing.rst
    • reference_configurations.rst
    • setup_configuration.rst
    • test_cases.rst
Location:
NEMO/trunk/doc/latex
Files:
2 added
2 edited
2 copied
1 moved

Legend:

Unmodified
Added
Removed

  • NEMO/trunk/doc/latex/NEMO/main/NEMO_manual.sty

    r10125 r10146  
    3030 
    3131\captionsetup{margin=10pt, font={small}, labelsep=colon, labelfont={bf}} 
    32 \graphicspath{{../figures/}} 
     32\graphicspath{{../../../figures/}} 
    3333\hypersetup{ 
    3434   pdftitle={NEMO ocean engine}, pdfauthor={Gurvan Madec, and the NEMO team}, 
    … …  
    4444 
    4545\pagestyle{fancy} 
    46 \bibliographystyle{../tex_sub/ametsoc} 
     46\bibliographystyle{../main/ametsoc} 
    4747 
    4848 
    … …  
    168168 
    169169\newcommand{\doi}[1]{\href{http://dx.doi.org/#1}{full-text}} 
     170 
     171\newcommand{\nlst}[1]{\forfile{../../../namelists/#1}} 

  • NEMO/trunk/doc/latex/NEMO/main/NEMO_manual.tex

    r9394 r10146  
    1515%% ============================================================================== 
    1616 
    17 \usepackage{../tex_main/NEMO_manual} 
    18 \usepackage{../tex_sub/NEMO_minted} 
     17%% Custom style 
     18\usepackage{../main/NEMO_manual} 
     19\usepackage{../main/NEMO_minted} 
    1920 
    2021\makeindex 
    … …  
    7273%% Abstract - Foreword 
    7374 
    74 \subfile{../tex_sub/abstract_foreword} 
     75\subfile{../subfiles/abstract_foreword} 
    7576 
    7677 
    7778% Introduction 
    7879 
    79 \subfile{../tex_sub/introduction} 
     80\subfile{../subfiles/introduction} 
    8081 
    8182 
    8283% Chapters 
    8384 
    84 \subfile{../tex_sub/chap_model_basics} 
     85\subfile{../subfiles/chap_model_basics} 
    8586 
    86 \subfile{../tex_sub/chap_time_domain}           % Time discretisation (time stepping strategy) 
     87\subfile{../subfiles/chap_time_domain}   % Time discretisation (time stepping strategy) 
    8788 
    88 \subfile{../tex_sub/chap_DOM}          % Space discretisation 
     89\subfile{../subfiles/chap_DOM}           % Space discretisation 
    8990 
    90 \subfile{../tex_sub/chap_TRA}          % Tracer advection/diffusion equation 
     91\subfile{../subfiles/chap_TRA}           % Tracer advection/diffusion equation 
    9192 
    92 \subfile{../tex_sub/chap_DYN}          % Dynamics : momentum equation 
     93\subfile{../subfiles/chap_DYN}           % Dynamics : momentum equation 
    9394 
    94 \subfile{../tex_sub/chap_SBC}          % Surface Boundary Conditions 
     95\subfile{../subfiles/chap_SBC}           % Surface Boundary Conditions 
    9596 
    96 \subfile{../tex_sub/chap_LBC}          % Lateral Boundary Conditions 
     97\subfile{../subfiles/chap_LBC}           % Lateral Boundary Conditions 
    9798 
    98 \subfile{../tex_sub/chap_LDF}          % Lateral diffusion 
     99\subfile{../subfiles/chap_LDF}           % Lateral diffusion 
    99100 
    100 \subfile{../tex_sub/chap_ZDF}          % Vertical diffusion 
     101\subfile{../subfiles/chap_ZDF}           % Vertical diffusion 
    101102 
    102 \subfile{../tex_sub/chap_DIA}          % Outputs and Diagnostics 
     103\subfile{../subfiles/chap_DIA}           % Outputs and Diagnostics 
    103104 
    104 \subfile{../tex_sub/chap_OBS}          % Observation operator 
     105\subfile{../subfiles/chap_OBS}           % Observation operator 
    105106 
    106 \subfile{../tex_sub/chap_ASM}          % Assimilation increments 
     107\subfile{../subfiles/chap_ASM}           % Assimilation increments 
    107108 
    108 \subfile{../tex_sub/chap_STO}          % Stochastic param. 
     109\subfile{../subfiles/chap_STO}           % Stochastic param. 
    109110 
    110 \subfile{../tex_sub/chap_misc}            % Miscellaneous topics 
     111\subfile{../subfiles/chap_misc}          % Miscellaneous topics 
    111112 
    112 \subfile{../tex_sub/chap_CONFIG}       % Predefined configurations 
     113\subfile{../subfiles/chap_CONFIG}        % Predefined configurations 
    113114 
    114115 
    … …  
    117118\appendix 
    118119 
    119 \subfile{../tex_sub/annex_A}              % Generalised vertical coordinate 
     120\subfile{../subfiles/annex_A}             % Generalised vertical coordinate 
    120121 
    121 \subfile{../tex_sub/annex_B}              % Diffusive operator 
     122\subfile{../subfiles/annex_B}             % Diffusive operator 
    122123 
    123 \subfile{../tex_sub/annex_C}              % Discrete invariants of the eqs. 
     124\subfile{../subfiles/annex_C}             % Discrete invariants of the eqs. 
    124125 
    125 \subfile{../tex_sub/annex_iso}            % Isoneutral diffusion using triads 
     126\subfile{../subfiles/annex_iso}           % Isoneutral diffusion using triads 
    126127 
    127 \subfile{../tex_sub/annex_D}              % Coding rules 
     128\subfile{../subfiles/annex_D}             % Coding rules 
    128129 
    129130%% Not included 
    130 %\subfile{../tex_sub/chap_conservation}   % 
    131 %\subfile{../tex_sub/annex_E}          % Notes on some on going staff 
    132 %\subfile{../tex_sub/annex_Fox-Kemper} % Notes on Fox-Kemper 
    133 %\subfile{../tex_sub/annex_EVP}           % Notes on EVP 
     131%\subfile{../subfiles/chap_conservation}  % 
     132%\subfile{../subfiles/annex_E}            % Notes on some on going staff 
     133%\subfile{../subfiles/annex_Fox-Kemper}   % Notes on Fox-Kemper 
     134%\subfile{../subfiles/annex_EVP}          % Notes on EVP 
    134135 
    135136 
    … …  
    145146\phantomsection 
    146147\addcontentsline{toc}{chapter}{Bibliography} 
    147 \bibliography{../tex_main/NEMO_manual} 
     148\bibliography{../main/NEMO_manual} 
    148149 
    149150 

  • NEMO/trunk/doc/latex/NEMO/main/NEMO_minted.sty

    r10139 r10146  
    1818%% ============================================================================== 
    1919 
    20 \newmint[forline]{fortran}{}        % \forline|...| 
    21 \newmint[xmlline]{xml}{}         % \xmlline|...| 
    22 \newmint[cmd]{console}{}         % \cmd|...| 
     20\newmint[forline]{fortran}{}   % \forline|...| 
     21\newmint[xmlline]{xml}{}       % \xmlline|...| 
     22\newmint[cmd]{console}{}       % \cmd|...| 
    2323 
    2424 
    … …  
    2626%% ============================================================================== 
    2727 
    28 \newminted[forlines]{fortran}{}        % \begin{forlines} 
    29 \newminted[xmllines]{xml}{}         % \begin{xmllines} 
    30 \newminted[cmds]{console}{}         % \begin{cmds} 
    31 \newminted[clines]{c}{fontsize=\tiny}        % \begin{clines} 
     28\newminted[forlines]{fortran}{}         % \begin{forlines} 
     29\newminted[xmllines]{xml}{}             % \begin{xmllines} 
     30\newminted[cmds]{console}{}             % \begin{cmds} 
     31\newminted[clines]{c}{fontsize=\tiny}   % \begin{clines} 
    3232 
    3333 
    3434%% File 
    3535 
    36 \newmintedfile[forfile]{fortran}{fontsize=\tiny}         % \forfile{../namelists/nam...} 
     36\newmintedfile[forfile]{fortran}{fontsize=\tiny}   % \forfile{../namelists/nam...} 
    3737 
    3838 
    … …  
    4040%% ============================================================================== 
    4141 
    42 \newmintinline[forcode]{fortran}{fontsize=auto, frame=lines}         % \forcode{...} 
    43 \newmintinline[xmlcode]{xml}{    fontsize=auto, frame=lines}         % \xmlcode{...} 
    44 \newmintinline[snippet]{console}{fontsize=auto, frame=lines}         % \snippet{...} 
     42\newmintinline[forcode]{fortran}{fontsize=auto, frame=lines}   % \forcode{...} 
     43\newmintinline[xmlcode]{xml}{    fontsize=auto, frame=lines}   % \xmlcode{...} 
     44\newmintinline[snippet]{console}{fontsize=auto, frame=lines}   % \snippet{...} 
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