- Timestamp:
- 2018-11-21T11:25:53+01:00 (5 years ago)
- Location:
- NEMO/branches/2018/dev_r10164_HPC09_ESIWACE_PREP_MERGE/cfgs/SHARED
- Files:
-
- 4 edited
- 1 copied
-
README.rst (copied) (copied from NEMO/trunk/cfgs/SHARED/README.rst)
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field_def_nemo-pisces.xml (modified) (1 diff)
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grid_def_nemo.xml (modified) (1 diff)
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namelist_pisces_ref (modified) (3 diffs)
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namelist_ref (modified) (1 diff)
Legend:
- Unmodified
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- Removed
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NEMO/branches/2018/dev_r10164_HPC09_ESIWACE_PREP_MERGE/cfgs/SHARED/field_def_nemo-pisces.xml
r9539 r10345 115 115 116 116 </field_group> 117 118 <!-- SEDIMENT variables on T sediment grid --> 119 <field_group id="sed_T" grid_ref="grid_T_3DS"> 120 <field id="SedDIC" long_name="Dissolved inorganic Concentration" unit="mmol/m3" /> 121 <field id="SedAlkalini" long_name="Total Alkalinity Concentration" unit="mmol/m3" /> 122 <field id="SedO2" long_name="Oxygen Concentration" unit="mmol/m3" /> 123 <field id="SedCaCO3" long_name="Calcite Concentration" unit="%" /> 124 <field id="SedPOS" long_name="Semi-ref POC Concentration" unit="%" /> 125 <field id="SedPOR" long_name="Refractory POC Concentration" unit="%" /> 126 <field id="SedPO4" long_name="Phosphate Concentration" unit="mmol/m3" /> 127 <field id="SedPOC" long_name="Labile POC Concentration" unit="%" /> 128 <field id="SedSil" long_name="Silicate Concentration" unit="mmol/m3" /> 129 <field id="SedFe2" long_name="Fe2+ Concentration" unit="mmol/m3" /> 130 <field id="SedBSi" long_name="Biogenic Silicate Concentration" unit="%" /> 131 <field id="SedNO3" long_name="Nitrate Concentration" unit="mmol/m3" /> 132 <field id="SedNH4" long_name="Ammonium Concentration" unit="mmol/m3" /> 133 <field id="SedH2S" long_name="H2S Concentration" unit="mmol/m3" /> 134 <field id="SedSO4" long_name="SO4 Concentration" unit="mmol/m3" /> 135 <field id="SedClay" long_name="Clay Concentration" unit="%" /> 136 <field id="SedFeO" long_name="Fe(OH)3 Concentration" unit="%" /> 137 <field id="SedFeS" long_name="FeS Concentration" unit="%" /> 138 <field id="SedpH" long_name="PH" unit="1" /> 139 <field id="SedCO3por" long_name="Bicarbonates" unit="mol/m3" /> 140 </field_group> 141 142 <!-- SEDIMENT additional variables on T sediment grid --> 143 <field_group id="Diag_S" grid_ref="grid_T_2D"> 144 <field id="FlxSi" long_name="Si sediment flux" unit="mol/cm2/s" /> 145 <field id="FlxO2" long_name="O2 sediment flux" unit="mol/cm2/s" /> 146 <field id="FlxDIC" long_name="DIC sediment flux" unit="mol/cm2/s" /> 147 <field id="FlxNO3" long_name="NO3 sediment flux" unit="mol/cm2/s" /> 148 <field id="FlxPO4" long_name="PO4 sediment flux" unit="mol/cm2/s" /> 149 <field id="FlxAlkalini" long_name="Alkalinity sediment flux" unit="mol/cm2/s" /> 150 <field id="FlxNH4" long_name="Ammonium sediment flux" unit="mol/cm2/s" /> 151 <field id="FlxH2S" long_name="H2S sediment flux" unit="mol/cm2/s" /> 152 <field id="FlxSO4" long_name="SO4 sediment flux" unit="mol/cm2/s" /> 153 <field id="FlxFe2" long_name="Fe2+ sediment flux" unit="mol/cm2/s" /> 154 <field id="Flxtot" long_name="Sediment net burial rate" unit="cm/s" /> 155 <field id="dzdep" long_name="Sedimentation rate" unit="cm/s" /> 156 <field id="sflxclay" long_name="Clay sedimentation rate" unit="g/m2/s" /> 157 <field id="sflxcal" long_name="Calcite sedimentation rate" unit="mol/m2/s" /> 158 <field id="sflxbsi" long_name="BSi Sedimentation rate" unit="mol/m2/s" /> 159 <field id="sflxpoc" long_name="POC Sedimentation rate" unit="mol/m2/s" /> 160 <field id="sflxfeo" long_name="Fe(OH)3 Sedimentation rate" unit="mol/m2/s" /> 161 </field_group> 117 162 118 163 <!-- PISCES additional diagnostics on T grid --> -
NEMO/branches/2018/dev_r10164_HPC09_ESIWACE_PREP_MERGE/cfgs/SHARED/grid_def_nemo.xml
r9930 r10345 15 15 <domain id="grid_T" /> 16 16 <axis id="deptht" /> 17 </grid> 18 <!-- --> 19 <grid id="grid_T_3DS" > 20 <domain id="grid_T" /> 21 <axis id="profsed" /> 17 22 </grid> 18 23 <!-- --> -
NEMO/branches/2018/dev_r10164_HPC09_ESIWACE_PREP_MERGE/cfgs/SHARED/namelist_pisces_ref
r10111 r10345 17 17 ln_p5z = .false. ! PISCES QUOTA model used 18 18 ln_ligand = .false. ! Enable organic ligands 19 ln_sediment = .false. ! Enable sediment module 19 20 / 20 21 !----------------------------------------------------------------------- … … 62 63 / 63 64 !----------------------------------------------------------------------- 64 &namp4z ice! parameters for nutrient limitations for PISCES std - ln_p4z65 &namp4zlim ! parameters for nutrient limitations for PISCES std - ln_p4z 65 66 !----------------------------------------------------------------------- 66 67 concnno3 = 1.e-6 ! Nitrate half saturation of nanophytoplankton … … 86 87 / 87 88 !----------------------------------------------------------------------- 88 &namp5z ice! parameters for nutrient limitations PISCES QUOTA - ln_p5z89 &namp5zlim ! parameters for nutrient limitations PISCES QUOTA - ln_p5z 89 90 !----------------------------------------------------------------------- 90 91 concnno3 = 3e-6 ! Nitrate half saturation of nanophytoplankton -
NEMO/branches/2018/dev_r10164_HPC09_ESIWACE_PREP_MERGE/cfgs/SHARED/namelist_ref
r10075 r10345 481 481 ! ! file name ! frequency (hours) ! variable ! time interp.! clim ! 'yearly'/ ! weights filename ! rotation ! land/sea mask ! 482 482 ! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! ! pairing ! filename ! 483 sn_cdg = 'sdw_ wave' , 1 , 'drag_coeff' , .true. , .false., 'daily' , '', '' , ''484 sn_usd = 'sdw_ wave' , 1 , 'u_sd2d' , .true. , .false., 'daily' , '', '' , ''485 sn_vsd = 'sdw_ wave' , 1 , 'v_sd2d' , .true. , .false., 'daily' , '', '' , ''486 sn_hsw = 'sdw_ wave' , 1 , 'hs' , .true. , .false., 'daily' , '', '' , ''487 sn_wmp = 'sdw_ wave' , 1 , 'wmp' , .true. , .false., 'daily' , '', '' , ''488 sn_wfr = 'sdw_ wave' , 1 , 'wfr' , .true. , .false., 'daily' , '', '' , ''489 sn_wnum = 'sdw_ wave' , 1 , 'wave_num' , .true. , .false., 'daily' , '', '' , ''490 sn_tauwoc = 'sdw_ wave' , 1 , 'wave_stress', .true. , .false., 'daily' , '', '' , ''491 sn_tauwx = 'sdw_ wave' , 1 , 'wave_stress', .true. , .false., 'daily' , '', '' , ''492 sn_tauwy = 'sdw_ wave' , 1 , 'wave_stress', .true. , .false., 'daily' , '', '' , ''483 sn_cdg = 'sdw_ecwaves_orca2' , 6 , 'drag_coeff' , .true. , .true. , 'yearly' , '' , '' , '' 484 sn_usd = 'sdw_ecwaves_orca2' , 6 , 'u_sd2d' , .true. , .true. , 'yearly' , '' , '' , '' 485 sn_vsd = 'sdw_ecwaves_orca2' , 6 , 'v_sd2d' , .true. , .true. , 'yearly' , '' , '' , '' 486 sn_hsw = 'sdw_ecwaves_orca2' , 6 , 'hs' , .true. , .true. , 'yearly' , '' , '' , '' 487 sn_wmp = 'sdw_ecwaves_orca2' , 6 , 'wmp' , .true. , .true. , 'yearly' , '' , '' , '' 488 sn_wfr = 'sdw_ecwaves_orca2' , 6 , 'wfr' , .true. , .true. , 'yearly' , '' , '' , '' 489 sn_wnum = 'sdw_ecwaves_orca2' , 6 , 'wave_num' , .true. , .true. , 'yearly' , '' , '' , '' 490 sn_tauwoc = 'sdw_ecwaves_orca2' , 6 , 'wave_stress', .true. , .true. , 'yearly' , '' , '' , '' 491 sn_tauwx = 'sdw_ecwaves_orca2' , 6 , 'wave_stress', .true. , .true. , 'yearly' , '' , '' , '' 492 sn_tauwy = 'sdw_ecwaves_orca2' , 6 , 'wave_stress', .true. , .true. , 'yearly' , '' , '' , '' 493 493 / 494 494 !-----------------------------------------------------------------------
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