Changeset 1184

Timestamp:

2008-09-11T19:17:27+02:00 (16 years ago)

Author:

cetlod

Message:

update job_GYRE_LOBSTER.ksh file to take into account modifications in namelist_top

File:

• trunk/NVTK/INSTALL/JOBS/job_GYRE_LOBSTER.ksh (modified) (4 diffs)

trunk/NVTK/INSTALL/JOBS/job_GYRE_LOBSTER.ksh

@@ -90 +90 @@
 
 # namelist modifications
-PAT_TRC=$( supergrep nwritetrc  namelist_top_f90 )
-PAT_TRD=$( supergrep nwritetrd  namelist_top_f90 )
-
-sed -e "s%$PAT_TRC%   nwritetrc   = ${ITERATIONS}%" \
-    -e "s%$PAT_TRD%   nwritetrd  = ${ITERATIONS}%"  namelist_top_f90 > nam.tmp
+PAT_NWRITRC=$( supergrep nwritetrc               namelist_top_f90 )
+PAT_NWRITRD=$( supergrep ntrd_trc                namelist_top_f90 )
+PAT_RESTTRD=$( supergrep ln_trdmld_trc_restart   namelist_top_f90 )
+
+sed -e "s%$PAT_NWRITRC%   nwritetrc   = ${ITERATIONS}%" \
+    -e "s%$PAT_NWRITRD%   ntrd_trc    = ${ITERATIONS}%" \
+    -e "s%$PAT_RESTTRD%   ln_trdmld_trc_restart =  .false.%" namelist_top_f90 > nam.tmp
 
 mv nam.tmp namelist_top
@@ -108 +110 @@
 then
     if [ ${RUN} = 'mon' -o ${RUN} = 'omp' ] ; then 
-        cp ${WORK}/NEMO_VALID/W${CONF}/${RUN}/1_SHORT/*_restart.nc restart.nc
-        cp ${WORK}/NEMO_VALID/W${CONF}/${RUN}/1_SHORT/*_restart_mld.nc restart_mld.nc
-        cp ${WORK}/NEMO_VALID/W${CONF}/${RUN}/1_SHORT/*_restart_trc.nc restart_trc.nc
+        cp ${WORK}/NEMO_VALID/W${CONF}/${RUN}/1_SHORT/*_restart.nc         restart.nc
+        cp ${WORK}/NEMO_VALID/W${CONF}/${RUN}/1_SHORT/*_restart_mld.nc     restart_mld.nc
+        cp ${WORK}/NEMO_VALID/W${CONF}/${RUN}/1_SHORT/*_restart_trc.nc     restart_trc.nc
+        cp ${WORK}/NEMO_VALID/W${CONF}/${RUN}/1_SHORT/*_restart_mld_trc.nc restart_mld_trc.nc
     fi
 
@@ -117 +120 @@
         while [ $i -lt $NB_PROCS ]
         do
-           cp ${WORK}/NEMO_VALID/W${CONF}/${RUN}/1_SHORT/*_restart_${i}.nc restart_${i}.nc
-           cp ${WORK}/NEMO_VALID/W${CONF}/${RUN}/1_SHORT/*_restart_mld_${i}.nc restart_mld_${i}.nc
-           cp ${WORK}/NEMO_VALID/W${CONF}/${RUN}/1_SHORT/*_restart_trc_${i}.nc restart_trc_${i}.nc
+           cp ${WORK}/NEMO_VALID/W${CONF}/${RUN}/1_SHORT/*_restart_${i}.nc         restart_${i}.nc
+           cp ${WORK}/NEMO_VALID/W${CONF}/${RUN}/1_SHORT/*_restart_mld_${i}.nc     restart_mld_${i}.nc
+           cp ${WORK}/NEMO_VALID/W${CONF}/${RUN}/1_SHORT/*_restart_trc_${i}.nc     restart_trc_${i}.nc
+           cp ${WORK}/NEMO_VALID/W${CONF}/${RUN}/1_SHORT/*_restart_mld_trc_${i}.nc restart_mld_trc_${i}.nc
            let i=$i+1
         done
@@ -142 +146 @@
 
     # Biogeochemistry namelist modifications
-    PAT_RESTAR=$( supergrep lrsttr  namelist_top )
-    sed -e "s%$PAT_RESTAR%   lrsttr      = .true. %" namelist_top > nam.tmp
+    PAT_RESTAR=$( supergrep lrsttr                  namelist_top )
+    PAT_RESTRD=$( supergrep ln_trdmld_trc_restart   namelist_top ) 
+   
+    sed -e "s%$PAT_RESTAR%   lrsttr      = .true. %"  \
+        -e "s%$PAT_RESTRD%   ln_trdmld_trc_restart =  .true.%" namelist_top > nam.tmp
+
     mv nam.tmp namelist_top