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Changeset 13229 for NEMO/branches/2020/dev_r12558_HPC-08_epico_Extra_Halo/tests – NEMO

Ignore:
Timestamp:
2020-07-02T17:33:41+02:00 (4 years ago)
Author:
francesca
Message:

dev_r12558_HPC-08_epico_Extra_Halo: merge with trunk@13218, see #2366

Location:
NEMO/branches/2020/dev_r12558_HPC-08_epico_Extra_Halo/tests
Files:
5 edited
2 copied

Legend:

Unmodified
Added
Removed

  • NEMO/branches/2020/dev_r12558_HPC-08_epico_Extra_Halo/tests/CANAL/MY_SRC/stpctl.F90

    r13186 r13229  
    119119      !                                   !==            test of local extrema           ==! 
    120120      !                                   !==  done by all processes at every time step  ==! 
    121       ! 
    122       ! define zmax default value. needed for land processors 
    123       IF( ll_colruns ) THEN    ! default value: must not be kept when calling mpp_max -> must be as small as possible 
    124          zmax(:) = -HUGE(1._wp) 
    125       ELSE                     ! default value: must not give true for any of the tests bellow (-> avoid manipulating HUGE...) 
    126          zmax(:) =  0._wp 
    127          zmax(3) = -1._wp      ! avoid salinity minimum at 0. 
    128       ENDIF 
    129       ! 
    130121      llmsk(:,:,1) = ssmask(:,:) == 1._wp 
    131       IF( COUNT( llmsk(:,:,1) ) > 0 ) THEN   ! avoid huge values sent back for land processors... 
    132          IF( ll_wd ) THEN 
    133             zmax(1) = MAXVAL( ABS( ssh(:,:,Kmm) + ssh_ref ), mask = llmsk(:,:,1) )   ! ssh max 
     122      IF( ll_wd ) THEN 
     123         zmax(1) = MAXVAL( ABS( ssh(:,:,Kmm) + ssh_ref ), mask = llmsk(:,:,1) )   ! ssh max 
     124      ELSE 
     125         zmax(1) = MAXVAL( ABS( ssh(:,:,Kmm)           ), mask = llmsk(:,:,1) )   ! ssh max 
     126      ENDIF 
     127      llmsk(:,:,:) = umask(:,:,:) == 1._wp 
     128      zmax(2) = MAXVAL(  ABS( uu(:,:,:,Kmm) ), mask = llmsk )                     ! velocity max (zonal only) 
     129      llmsk(:,:,:) = tmask(:,:,:) == 1._wp 
     130      zmax(3) = MAXVAL( -ts(:,:,:,jp_sal,Kmm), mask = llmsk )                     ! minus salinity max 
     131      zmax(4) = MAXVAL(  ts(:,:,:,jp_sal,Kmm), mask = llmsk )                     !       salinity max 
     132      IF( ll_colruns .OR. jpnij == 1 ) THEN     ! following variables are used only in the netcdf file 
     133         zmax(5) = MAXVAL( -ts(:,:,:,jp_tem,Kmm), mask = llmsk )                  ! minus temperature max 
     134         zmax(6) = MAXVAL(  ts(:,:,:,jp_tem,Kmm), mask = llmsk )                  !       temperature max 
     135         IF( ln_zad_Aimp ) THEN 
     136            zmax(7) = MAXVAL(   Cu_adv(:,:,:)   , mask = llmsk )                  ! partitioning coeff. max 
     137            llmsk(:,:,:) = wmask(:,:,:) == 1._wp 
     138            zmax(8) = MAXVAL(  ABS( wi(:,:,:) ) , mask = llmsk )                  ! implicit vertical vel. max 
    134139         ELSE 
    135             zmax(1) = MAXVAL( ABS( ssh(:,:,Kmm)           ), mask = llmsk(:,:,1) )   ! ssh max 
    136          ENDIF 
    137       ENDIF 
    138       zmax(2) = MAXVAL( ABS( uu(:,:,:,Kmm) ) )                                       ! velocity max (zonal only) 
    139       llmsk(:,:,:) = tmask(:,:,:) == 1._wp 
    140       IF( COUNT( llmsk(:,:,:) ) > 0 ) THEN   ! avoid huge values sent back for land processors... 
    141          zmax(3) = MAXVAL( -ts(:,:,:,jp_sal,Kmm), mask = llmsk )                     ! minus salinity max 
    142          zmax(4) = MAXVAL(  ts(:,:,:,jp_sal,Kmm), mask = llmsk )                     !       salinity max 
    143          IF( ll_colruns .OR. jpnij == 1 ) THEN     ! following variables are used only in the netcdf file 
    144             zmax(5) = MAXVAL( -ts(:,:,:,jp_tem,Kmm), mask = llmsk )                  ! minus temperature max 
    145             zmax(6) = MAXVAL(  ts(:,:,:,jp_tem,Kmm), mask = llmsk )                  !       temperature max 
    146             IF( ln_zad_Aimp ) THEN 
    147                zmax(7) = MAXVAL(   Cu_adv(:,:,:)   , mask = llmsk )                  ! partitioning coeff. max 
    148                llmsk(:,:,:) = wmask(:,:,:) == 1._wp 
    149                IF( COUNT( llmsk(:,:,:) ) > 0 ) THEN   ! avoid huge values sent back for land processors... 
    150                   zmax(8) = MAXVAL(ABS( wi(:,:,:) ), mask = llmsk )                  ! implicit vertical vel. max 
    151                ENDIF 
    152             ENDIF 
    153          ENDIF 
     140            zmax(7:8) = 0._wp 
     141         ENDIF 
     142      ELSE 
     143         zmax(5:8) = 0._wp 
    154144      ENDIF 
    155145      zmax(9) = REAL( nstop, wp )                                              ! stop indicator 

  • NEMO/branches/2020/dev_r12558_HPC-08_epico_Extra_Halo/tests/README.rst

    r11743 r13229  
    205205   :style: unsrt 
    206206   :labelprefix: T 
     207 
     208CPL_OASIS 
     209--------- 
     210| This test case checks the OASIS interface in OCE/SBC, allowing to set up  
     211a coupled configuration through OASIS. See CPL_OASIS/README.md for more information. 

  • NEMO/branches/2020/dev_r12558_HPC-08_epico_Extra_Halo/tests/STATION_ASF/EXPREF/launch_sasf.sh

    r13186 r13229  
    11#!/bin/bash 
    22 
    3 ################################################################ 
    4 # 
    5 # Script to launch a set of STATION_ASF simulations 
    6 # 
    7 # L. Brodeau, 2020 
    8 # 
    9 ################################################################ 
     3# NEMO directory where to fetch compiled STATION_ASF nemo.exe + setup: 
     4NEMO_DIR=`pwd | sed -e "s|/tests/STATION_ASF/EXPREF||g"` 
    105 
    11 # What directory inside "tests" actually contains the compiled "nemo.exe" for STATION_ASF ? 
     6echo "Using NEMO_DIR=${NEMO_DIR}" 
     7 
     8# what directory inside "tests" actually contains the compiled test-case? 
    129TC_DIR="STATION_ASF2" 
    1310 
    14 # DATA_IN_DIR => Directory containing sea-surface + atmospheric forcings 
     11# => so the executable to use is: 
     12NEMO_EXE="${NEMO_DIR}/tests/${TC_DIR}/BLD/bin/nemo.exe" 
     13 
     14# Directory where to run the simulation: 
     15WORK_DIR="${HOME}/tmp/STATION_ASF" 
     16 
     17 
     18# FORC_DIR => Directory containing sea-surface + atmospheric forcings 
    1519#             (get it there https://drive.google.com/file/d/1MxNvjhRHmMrL54y6RX7WIaM9-LGl--ZP/): 
    1620if [ `hostname` = "merlat"        ]; then 
    17     DATA_IN_DIR="/MEDIA/data/STATION_ASF/input_data_STATION_ASF_2016-2018" 
     21    FORC_DIR="/MEDIA/data/STATION_ASF/input_data_STATION_ASF_2016-2018" 
    1822elif [ `hostname` = "luitel"        ]; then 
    19     DATA_IN_DIR="/data/gcm_setup/STATION_ASF/input_data_STATION_ASF_2016-2018" 
     23    FORC_DIR="/data/gcm_setup/STATION_ASF/input_data_STATION_ASF_2016-2018" 
    2024elif [ `hostname` = "ige-meom-cal1" ]; then 
    21     DATA_IN_DIR="/mnt/meom/workdir/brodeau/STATION_ASF/input_data_STATION_ASF_2016-2018" 
     25    FORC_DIR="/mnt/meom/workdir/brodeau/STATION_ASF/input_data_STATION_ASF_2016-2018" 
    2226elif [ `hostname` = "salvelinus" ]; then 
    23     DATA_IN_DIR="/opt/data/STATION_ASF/input_data_STATION_ASF_2016-2018" 
     27    FORC_DIR="/opt/data/STATION_ASF/input_data_STATION_ASF_2016-2018" 
    2428else 
    25     echo "Oops! We don't know `hostname` yet! Define 'DATA_IN_DIR' in the script!"; exit  
     29    echo "Boo!"; exit 
    2630fi 
    27  
    28 expdir=`basename ${PWD}`; # we expect "EXPREF" or "EXP00" normally... 
    29  
    30 # NEMOGCM root directory where to fetch compiled STATION_ASF nemo.exe + setup: 
    31 NEMO_WRK_DIR=`pwd | sed -e "s|/tests/STATION_ASF/${expdir}||g"` 
    32  
    33 # Directory where to run the simulation: 
    34 PROD_DIR="${HOME}/tmp/STATION_ASF" 
     31#====================== 
     32mkdir -p ${WORK_DIR} 
    3533 
    3634 
    37 ####### End of normal user configurable section ####### 
     35if [ ! -f ${NEMO_EXE} ]; then echo " Mhhh, no compiled nemo.exe found into ${NEMO_DIR}/tests/STATION_ASF/BLD/bin !"; exit; fi 
    3836 
    39 #================================================================================ 
    40  
    41 # NEMO executable to use is: 
    42 NEMO_EXE="${NEMO_WRK_DIR}/tests/${TC_DIR}/BLD/bin/nemo.exe" 
    43  
    44  
    45 echo "###########################################################" 
    46 echo "#        S T A T I O N   A i r  -  S e a   F l u x        #" 
    47 echo "###########################################################" 
    48 echo 
    49 echo " We shall work in here: ${STATION_ASF_DIR}/" 
    50 echo " NEMOGCM   work    depository is: ${NEMO_WRK_DIR}/" 
    51 echo "   ==> NEMO EXE to use: ${NEMO_EXE}" 
    52 echo " Input forcing data into: ${DATA_IN_DIR}/" 
    53 echo " Production will be done into: ${PROD_DIR}/" 
    54 echo 
    55  
    56 mkdir -p ${PROD_DIR} 
    57  
    58 if [ ! -f ${NEMO_EXE} ]; then echo " Mhhh, no compiled 'nemo.exe' found into `dirname ${NEMO_EXE}` !"; exit; fi 
    59  
    60 echo 
    61 echo " *** Using the following NEMO executable:" 
    62 echo "  ${NEMO_EXE} " 
    63 echo 
    64  
    65 NEMO_EXPREF="${NEMO_WRK_DIR}/tests/STATION_ASF/EXPREF" 
     37NEMO_EXPREF="${NEMO_DIR}/tests/STATION_ASF/EXPREF" 
    6638if [ ! -d ${NEMO_EXPREF} ]; then echo " Mhhh, no EXPREF directory ${NEMO_EXPREF} !"; exit; fi 
    6739 
    68 rsync -avP ${NEMO_EXE}          ${PROD_DIR}/ 
     40rsync -avP ${NEMO_EXE}          ${WORK_DIR}/ 
    6941 
    7042for ff in "context_nemo.xml" "domain_def_nemo.xml" "field_def_nemo-oce.xml" "file_def_nemo-oce.xml" "grid_def_nemo.xml" "iodef.xml" "namelist_ref"; do 
    7143    if [ ! -f ${NEMO_EXPREF}/${ff} ]; then echo " Mhhh, ${ff} not found into ${NEMO_EXPREF} !"; exit; fi 
    72     rsync -avPL ${NEMO_EXPREF}/${ff} ${PROD_DIR}/ 
     44    rsync -avPL ${NEMO_EXPREF}/${ff} ${WORK_DIR}/ 
    7345done 
    7446 
    7547# Copy forcing to work directory: 
    76 rsync -avP ${DATA_IN_DIR}/Station_PAPA_50N-145W*.nc ${PROD_DIR}/ 
     48rsync -avP ${FORC_DIR}/Station_PAPA_50N-145W*.nc ${WORK_DIR}/ 
    7749 
    7850for CASE in "ECMWF" "COARE3p6" "NCAR" "ECMWF-noskin" "COARE3p6-noskin"; do 
    … …  
    8658    scase=`echo "${CASE}" | tr '[:upper:]' '[:lower:]'` 
    8759 
    88     rm -f ${PROD_DIR}/namelist_cfg 
    89     rsync -avPL ${NEMO_EXPREF}/namelist_${scase}_cfg ${PROD_DIR}/namelist_cfg 
     60    rm -f ${WORK_DIR}/namelist_cfg 
     61    rsync -avPL ${NEMO_EXPREF}/namelist_${scase}_cfg ${WORK_DIR}/namelist_cfg 
    9062 
    91     cd ${PROD_DIR}/ 
     63    cd ${WORK_DIR}/ 
    9264    echo 
    9365    echo "Launching NEMO !" 

  • NEMO/branches/2020/dev_r12558_HPC-08_epico_Extra_Halo/tests/VORTEX/EXPREF/1_namelist_cfg

    r12489 r13229  
    9898&namagrif      !  AGRIF zoom                                            ("key_agrif") 
    9999!----------------------------------------------------------------------- 
    100    ln_spc_dyn    = .true.  !  use 0 as special value for dynamics 
    101    rn_sponge_tra =  800.   !  coefficient for tracer   sponge layer [m2/s] 
    102    rn_sponge_dyn =  800.   !  coefficient for dynamics sponge layer [m2/s] 
    103    ln_chk_bathy  = .FALSE. ! 
     100   rn_sponge_tra =  0.00768   !  coefficient for tracer   sponge layer [] 
     101   rn_sponge_dyn =  0.00768   !  coefficient for dynamics sponge layer [] 
    104102/ 
    105103!!====================================================================== 

  • NEMO/branches/2020/dev_r12558_HPC-08_epico_Extra_Halo/tests/demo_cfgs.txt

    r12377 r13229  
    1111BENCH OCE ICE TOP 
    1212STATION_ASF OCE 
     13CPL_OASIS  OCE TOP ICE NST 
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