Changeset 15574 for NEMO/branches/2021/dev_r14318_RK3_stage1/cfgs/SHARED
- Timestamp:
- 2021-12-03T20:32:50+01:00 (3 years ago)
- Location:
- NEMO/branches/2021/dev_r14318_RK3_stage1
- Files:
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- 12 edited
- 1 copied
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. (modified) (1 prop)
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cfgs/SHARED/axis_def_nemo.xml (modified) (1 diff)
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cfgs/SHARED/domain_def_nemo.xml (modified) (5 diffs)
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cfgs/SHARED/field_def_nemo-ice.xml (modified) (6 diffs)
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cfgs/SHARED/field_def_nemo-innerttrc.xml (modified) (1 diff)
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cfgs/SHARED/field_def_nemo-oce.xml (modified) (24 diffs)
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cfgs/SHARED/field_def_nemo-pisces.xml (modified) (3 diffs)
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cfgs/SHARED/grid_def_nemo.xml (modified) (9 diffs)
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cfgs/SHARED/namelist_ice_ref (modified) (3 diffs)
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cfgs/SHARED/namelist_pisces_ref (modified) (10 diffs)
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cfgs/SHARED/namelist_ref (modified) (13 diffs)
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cfgs/SHARED/namelist_sediment_ref (copied) (copied from NEMO/trunk/cfgs/SHARED/namelist_sediment_ref)
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cfgs/SHARED/namelist_top_ref (modified) (1 diff)
Legend:
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NEMO/branches/2021/dev_r14318_RK3_stage1
- Property svn:externals
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old new 9 9 10 10 # SETTE 11 ^/utils/CI/sette@14244 sette 11 ^/utils/CI/sette@HEAD sette 12
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- Property svn:externals
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NEMO/branches/2021/dev_r14318_RK3_stage1/cfgs/SHARED/axis_def_nemo.xml
r14072 r15574 29 29 <axis id="section_ice" n_glo="4" /> 30 30 <axis id="gau" /> 31 <!-- PISCES Sediment vertical axis definition --> 32 <axis id="profsed" long_name="Vertical S levels" unit="cm" positive="down"/> 31 33 </axis_definition> -
NEMO/branches/2021/dev_r14318_RK3_stage1/cfgs/SHARED/domain_def_nemo.xml
r14072 r15574 4 4 <!-- T grid --> 5 5 <domain id="grid_T" long_name="grid T"/> 6 <domain id="grid_T_inner" long_name="grid T inner"/> 6 7 7 8 <!-- My zoom: example of hand defined zoom --> … … 167 168 <!-- U grid --> 168 169 <domain id="grid_U" long_name="grid U"/> 170 <domain id="grid_U_inner" long_name="grid U inner"/> 169 171 <!-- Eq section --> 170 172 <domain id="EqU" domain_ref="grid_U" > <zoom_domain id="EqU"/> </domain> … … 173 175 <!-- V grid --> 174 176 <domain id="grid_V" long_name="grid V"/> 177 <domain id="grid_V_inner" long_name="grid V inner"/> 175 178 <!-- Eq section : no V point on the Equator... --> 176 179 … … 178 181 <!-- W grid --> 179 182 <domain id="grid_W" long_name="grid W"/> 183 <domain id="grid_W_inner" long_name="grid W inner"/> 180 184 <!-- Eq section --> 181 185 <domain id="EqW" domain_ref="grid_W" > <zoom_domain id="EqW"/> </domain> … … 183 187 <!-- F grid --> 184 188 <domain id="grid_F" long_name="grid F"/> 189 <domain id="grid_F_inner" long_name="grid F inner"/> 185 190 186 191 <!-- zonal mean grid --> -
NEMO/branches/2021/dev_r14318_RK3_stage1/cfgs/SHARED/field_def_nemo-ice.xml
r14072 r15574 178 178 <field id="hfxcndtop" long_name="Net conductive heat flux at the ice surface (neg = ice cooling)" standard_name="conductive_heat_flux_at_sea_ice_surface" unit="W/m2" /> 179 179 <field id="hfxcndbot" long_name="Net conductive heat flux at the ice bottom (neg = ice cooling)" standard_name="conductive_heat_flux_at_sea_ice_bottom" unit="W/m2" /> 180 <field id="hfxmelt" long_name="Melt heat flux at the ice surface" unit="W/m2" /> 181 <field id="hfxldmelt" long_name="Heat flux in the lead for ice melting" unit="W/m2" /> 182 <field id="hfxldgrow" long_name="Heat flux in the lead for ice growth" unit="W/m2" /> 180 183 181 184 <!-- diags --> … … 345 348 <field id="SH_icearea" long_name="Sea ice area South" standard_name="sea_ice_area_s" unit="1e6_km2" /> 346 349 347 <!-- available with ln_icediaout --> 350 <!-- available with ln_icediahsb --> 351 <!-- global forcings --> 348 352 <field id="ibgfrcvoltop" long_name="global mean ice/snow forcing at interface ice/snow-atm (volume equivalent ocean volume)" unit="km3" /> 349 353 <field id="ibgfrcvolbot" long_name="global mean ice/snow forcing at interface ice/snow-ocean (volume equivalent ocean volume)" unit="km3" /> … … 354 358 <field id="ibgfrchfxbot" long_name="global mean heat flux below ice (on top of ocean) " unit="W/m2" /> 355 359 360 <!-- global drifts (conservation checks) --> 356 361 <field id="ibgvolume" long_name="drift in ice/snow volume (equivalent ocean volume)" unit="km3" /> 357 362 <field id="ibgsaltco" long_name="drift in ice salt content (equivalent ocean volume)" unit="pss*km3" /> … … 359 364 <field id="ibgheatfx" long_name="drift in ice/snow heat flux" unit="W/m2" /> 360 365 366 <!-- global contents --> 361 367 <field id="ibgvol_tot" long_name="global mean ice volume" unit="km3" /> 362 368 <field id="sbgvol_tot" long_name="global mean snow volume" unit="km3" /> 363 369 <field id="ibgarea_tot" long_name="global mean ice area" unit="km2" /> 364 <field id="ibgsalt_tot" long_name="global mean ice salt content" unit=" 1e-3*km3"/>370 <field id="ibgsalt_tot" long_name="global mean ice salt content" unit="pss*km3" /> 365 371 <field id="ibgheat_tot" long_name="global mean ice heat content" unit="1e20J" /> 366 372 <field id="sbgheat_tot" long_name="global mean snow heat content" unit="1e20J" /> 373 <field id="ipbgvol_tot" long_name="global mean ice pond volume" unit="km3" /> 374 <field id="ilbgvol_tot" long_name="global mean ice pond lid volume" unit="km3" /> 367 375 368 376 </field_group> … … 496 504 </field_group> 497 505 506 <!--============================--> 507 <!-- CONSERVATION diagnostics --> 508 <!--============================--> 509 498 510 <field_group id="ICE_globalbudget" grid_ref="grid_scalar" > 499 <!-- global contents -->500 511 <field field_ref="ibgvol_tot" name="ibgvol_tot" /> 501 512 <field field_ref="sbgvol_tot" name="sbgvol_tot" /> … … 504 515 <field field_ref="ibgheat_tot" name="ibgheat_tot" /> 505 516 <field field_ref="sbgheat_tot" name="sbgheat_tot" /> 506 507 <!-- global drifts (conservation checks) --> 508 <field field_ref="ibgvolume" name="ibgvolume" /> 509 <field field_ref="ibgsaltco" name="ibgsaltco" /> 510 <field field_ref="ibgheatco" name="ibgheatco" /> 511 <field field_ref="ibgheatfx" name="ibgheatfx" /> 512 513 <!-- global forcings --> 514 <field field_ref="ibgfrcvoltop" name="ibgfrcvoltop" /> 515 <field field_ref="ibgfrcvolbot" name="ibgfrcvolbot" /> 516 <field field_ref="ibgfrctemtop" name="ibgfrctemtop" /> 517 <field field_ref="ibgfrctembot" name="ibgfrctembot" /> 518 <field field_ref="ibgfrcsal" name="ibgfrcsal" /> 519 <field field_ref="ibgfrchfxtop" name="ibgfrchfxtop" /> 520 <field field_ref="ibgfrchfxbot" name="ibgfrchfxbot" /> 521 </field_group> 522 523 517 <field field_ref="ipbgvol_tot" name="ipbgvol_tot" /> 518 <field field_ref="ilbgvol_tot" name="ilbgvol_tot" /> 519 </field_group> 520 521 <field_group id="ICE_budget" grid_ref="grid_T_2D" > 522 <!-- general --> 523 <field field_ref="icemask" name="simsk" /> 524 <field field_ref="iceconc" name="siconc" /> 525 <field field_ref="icetemp" name="sitemp" /> 526 <field field_ref="snwtemp" name="sntemp" /> 527 <field field_ref="icettop" name="sittop" /> 528 <field field_ref="icetbot" name="sitbot" /> 529 <!-- heat fluxes --> 530 <field field_ref="qt_oce_ai" name="qt_oce_ai" /> 531 <field field_ref="qt_atm_oi" name="qt_atm_oi" /> 532 <field field_ref="qtr_ice_top" name="qtr_ice_top"/> 533 <field field_ref="qtr_ice_bot" name="qtr_ice_bot"/> 534 <field field_ref="qt_ice" name="qt_ice" /> 535 <field field_ref="qsr_ice" name="qsr_ice" /> 536 <field field_ref="qns_ice" name="qns_ice" /> 537 <field field_ref="qemp_ice" name="qemp_ice" /> 538 <field field_ref="hfxsub" name="hfxsub" /> 539 <field field_ref="hfxspr" name="hfxspr" /> 540 <field field_ref="hfxcndtop" name="hfxcndtop" /> 541 <field field_ref="hfxcndbot" name="hfxcndbot" /> 542 <field field_ref="hfxsensib" name="hfxsensib" /> 543 <field field_ref="hfxmelt" name="hfxmelt" /> 544 <field field_ref="hfxldmelt" name="hfxldmelt" /> 545 <field field_ref="hfxldgrow" name="hfxldgrow" /> 546 <!-- salt fluxes --> 547 <field field_ref="sfxice" name="sfxice" /> 548 <!-- mass fluxes --> 549 <field field_ref="vfxice" name="vfxice" /> 550 <field field_ref="vfxsnw" name="vfxsnw" /> 551 <field field_ref="vfxpnd" name="vfxpnd" /> 552 <field field_ref="vfxsub" name="vfxsub" /> 553 <field field_ref="vfxsub_err" name="vfxsub_err" /> 554 <field field_ref="vfxsnw_sub" name="vfxsnw_sub" /> 555 <field field_ref="vfxsnw_pre" name="vfxsnw_pre" /> 556 </field_group> 557 558 524 559 <!--============================--> 525 560 <!-- SIMIP sea ice field groups --> -
NEMO/branches/2021/dev_r14318_RK3_stage1/cfgs/SHARED/field_def_nemo-innerttrc.xml
r14072 r15574 43 43 <field id="C14Age" long_name="Radiocarbon age" unit="yr" grid_ref="grid_T_3D" /> 44 44 <field id="RAge" long_name="Reservoir Age" unit="yr" /> 45 <field id="qtr_ C14" long_name="Air-sea flux of C14" unit="1/m2/s" />46 <field id="qint_ C14" long_name="Cumulative air-sea flux of C14" unit="1/m2" />45 <field id="qtr_c14" long_name="Air-sea flux of C14" unit="1/m2/s" /> 46 <field id="qint_c14" long_name="Cumulative air-sea flux of C14" unit="1/m2" /> 47 47 <field id="AtmCO2" long_name="Global atmospheric CO2" unit="ppm" /> 48 48 <field id="AtmC14" long_name="Global atmospheric DeltaC14" unit="permil" /> -
NEMO/branches/2021/dev_r14318_RK3_stage1/cfgs/SHARED/field_def_nemo-oce.xml
r14224 r15574 131 131 132 132 <!-- additions to diawri.F90 --> 133 <field id="s ocegrad" long_name="module of salinity gradient" unit="psu/m" grid_ref="grid_T_3D"/>134 <field id="s ocegrad2" long_name="square of module of salinity gradient" unit="psu2/m2" grid_ref="grid_T_3D"/>133 <field id="sssgrad" long_name="module of surface salinity gradient" unit="1e-3/m" grid_ref="grid_T_2D_inner"/> 134 <field id="sssgrad2" long_name="square of module of surface salinity gradient" unit="1e-6/m2" grid_ref="grid_T_2D_inner"/> 135 135 <field id="ke" long_name="kinetic energy" standard_name="specific_kinetic_energy_of_sea_water" unit="m2/s2" grid_ref="grid_T_3D" /> 136 <field id="ke_int" long_name="vertical integration of kinetic energy" unit="m3/s2" /> 137 <field id="relvor" long_name="relative vorticity" unit="s-1" grid_ref="grid_T_3D"/> 138 <field id="absvor" long_name="absolute vorticity" unit="s-1" grid_ref="grid_T_3D"/> 139 <field id="potvor" long_name="potential vorticity" unit="s-1" grid_ref="grid_T_3D"/> 136 <field id="ke_int" long_name="vertical integration of kinetic energy" unit="m3/s2" grid_ref="grid_T_2D_inner" /> 140 137 <field id="salt2c" long_name="Salt content vertically integrated" unit="1e-3*kg/m2" /> 141 138 … … 149 146 <field id="sstmax" long_name="max of sea surface temperature" field_ref="sst" operation="maximum" /> 150 147 <field id="sstmin" long_name="min of sea surface temperature" field_ref="sst" operation="minimum" /> 151 <field id="sstgrad" long_name="module of sst gradient" unit="degC/m" />152 <field id="sstgrad2" long_name="square of module of sst gradient" unit="degC2/m2" />153 <field id="sbt" long_name="sea bottom temperature" unit="degC" />154 <field id="tosmint" long_name="vertical integral of temperature times density" standard_name="integral_wrt_depth_of_product_of_density_and_potential_temperature" unit="(kg m2) degree_C" />148 <field id="sstgrad" long_name="module of sst gradient" unit="degC/m" grid_ref="grid_T_2D_inner" /> 149 <field id="sstgrad2" long_name="square of module of sst gradient" unit="degC2/m2" grid_ref="grid_T_2D_inner" /> 150 <field id="sbt" long_name="sea bottom temperature" unit="degC" grid_ref="grid_T_2D_inner" /> 151 <field id="tosmint" long_name="vertical integral of temperature times density" standard_name="integral_wrt_depth_of_product_of_density_and_potential_temperature" unit="(kg m2) degree_C" grid_ref="grid_T_2D_inner" /> 155 152 <field id="sst_wl" long_name="Delta SST of warm layer" unit="degC" /> 156 153 <field id="sst_cs" long_name="Delta SST of cool skin" unit="degC" /> … … 161 158 <field id="sssmax" long_name="max of sea surface salinity" field_ref="sss" operation="maximum" /> 162 159 <field id="sssmin" long_name="min of sea surface salinity" field_ref="sss" operation="minimum" /> 163 <field id="sbs" long_name="sea bottom salinity" unit="0.001" />164 <field id="somint" long_name="vertical integral of salinity times density" standard_name="integral_wrt_depth_of_product_of_density_and_salinity" unit="(kg m2) x (1e-3)" />165 166 <field id="taubot" long_name="bottom stress module" unit="N/m2"/>160 <field id="sbs" long_name="sea bottom salinity" unit="0.001" grid_ref="grid_T_2D_inner" /> 161 <field id="somint" long_name="vertical integral of salinity times density" standard_name="integral_wrt_depth_of_product_of_density_and_salinity" unit="(kg m2) x (1e-3)" grid_ref="grid_T_2D_inner" /> 162 163 <field id="taubot" long_name="bottom stress module" unit="N/m2" grid_ref="grid_T_2D_inner" /> 167 164 168 165 <!-- Case EOS = TEOS-10 : output potential temperature --> … … 181 178 <field id="mldr10_1max" long_name="Max of Mixed Layer Depth (dsigma = 0.01 wrt 10m)" field_ref="mldr10_1" operation="maximum" /> 182 179 <field id="mldr10_1min" long_name="Min of Mixed Layer Depth (dsigma = 0.01 wrt 10m)" field_ref="mldr10_1" operation="minimum" /> 183 <field id="heatc" long_name="Heat content vertically integrated" standard_name="integral_of_sea_water_potential_temperature_wrt_depth_expressed_as_heat_content" unit="J/m2" />184 <field id="saltc" long_name="Salt content vertically integrated" unit="1e-3 *kg/m2" />185 <field id="saltc2" long_name=" Salt content vertically integrated" unit="1e-3*kg/m2" > saltc * saltc </field>180 <field id="heatc" long_name="Heat content vertically integrated" standard_name="integral_of_sea_water_potential_temperature_wrt_depth_expressed_as_heat_content" unit="J/m2" grid_ref="grid_T_2D_inner" /> 181 <field id="saltc" long_name="Salt content vertically integrated" unit="1e-3.m" grid_ref="grid_T_2D_inner" /> 182 <field id="saltc2" long_name="square of Salt content vertically integrated" unit="1e-6.m2" grid_ref="grid_T_2D_inner" /> 186 183 187 184 <!-- EOS --> … … 191 188 192 189 <!-- Energy - horizontal divergence --> 193 <field id="sKE" long_name="surface kinetic energy" standard_name="specific_kinetic_energy_of_sea_water" unit="m2/s2" grid_ref="grid_T_2D " />190 <field id="sKE" long_name="surface kinetic energy" standard_name="specific_kinetic_energy_of_sea_water" unit="m2/s2" grid_ref="grid_T_2D_inner" /> 194 191 <field id="hdiv" long_name="horizontal divergence" unit="s-1" grid_ref="grid_T_3D" /> 195 192 … … 240 237 <field id="mf_Sp" long_name="plume_salinity" standard_name="plume_salinity" unit="1e-3" grid_ref="grid_T_3D" /> 241 238 <field id="mf_mf" long_name="mass flux" standard_name="mf_mass_flux" unit="m" grid_ref="grid_T_3D" /> 239 240 <!-- fluxes from damping --> 241 <field id="sflx_dmp_cea" long_name="salt flux due to damping" standard_name="salt_flux_due_to_damping" unit="g/m2/s" /> 242 <field id="hflx_dmp_cea" long_name="heat flux due to damping" standard_name="heat_flux_due_to_damping" unit="W/m2" /> 243 244 <!-- * variable related to ice shelf forcing * --> 245 246 <!-- * fwf * --> 247 <field id="fwfisf_cav" long_name="Ice shelf fresh water flux ( from isf to oce )" unit="kg/m2/s" /> 248 <field id="fwfisf_par" long_name="Ice shelf fresh water flux ( from isf to oce )" unit="kg/m2/s" /> 249 <field id="fwfisf3d_cav" long_name="3d Ice shelf fresh water flux ( from isf to oce )" unit="kg/m2/s" grid_ref="grid_T_3D" /> 250 <field id="fwfisf3d_par" long_name="3d Ice shelf fresh water flux ( from isf to oce )" unit="kg/m2/s" grid_ref="grid_T_3D" /> 251 252 <!-- * heat fluxes * --> 253 <field id="qoceisf_cav" long_name="Ice shelf ocean heat flux ( from isf to oce )" unit="W/m2" /> 254 <field id="qoceisf_par" long_name="Ice shelf ocean heat flux ( from isf to oce )" unit="W/m2" /> 255 <field id="qlatisf_cav" long_name="Ice shelf latent heat flux ( from isf to oce )" unit="W/m2" /> 256 <field id="qlatisf_par" long_name="Ice shelf latent heat flux ( from isf to oce )" unit="W/m2" /> 257 <field id="qhcisf_cav" long_name="Ice shelf heat content flux of injected water ( from isf to oce )" unit="W/m2" /> 258 <field id="qhcisf_par" long_name="Ice shelf heat content flux of injected water ( from isf to oce )" unit="W/m2" /> 259 <field id="qoceisf3d_cav" long_name="Ice shelf ocean heat flux ( from isf to oce )" unit="W/m2" grid_ref="grid_T_3D" /> 260 <field id="qoceisf3d_par" long_name="Ice shelf ocean heat flux ( from isf to oce )" unit="W/m2" grid_ref="grid_T_3D" /> 261 <field id="qlatisf3d_cav" long_name="Ice shelf latent heat flux ( from isf to oce )" unit="W/m2" grid_ref="grid_T_3D" /> 262 <field id="qlatisf3d_par" long_name="Ice shelf latent heat flux ( from isf to oce )" unit="W/m2" grid_ref="grid_T_3D" /> 263 <field id="qhcisf3d_cav" long_name="Ice shelf heat content flux of injected water ( from isf to oce )" unit="W/m2" grid_ref="grid_T_3D" /> 264 <field id="qhcisf3d_par" long_name="Ice shelf heat content flux of injected water ( from isf to oce )" unit="W/m2" grid_ref="grid_T_3D" /> 265 <field id="qconisf" long_name="Conductive heat flux through the ice shelf ( from isf to oce )" unit="W/m2" /> 266 267 <!-- top boundary layer properties --> 268 <field id="isftfrz_cav" long_name="freezing point temperature at ocean/isf interface" unit="degC" /> 269 <field id="isftfrz_par" long_name="freezing point temperature in the parametrization boundary layer" unit="degC" /> 270 <field id="isfthermald_cav" long_name="thermal driving of ice shelf melting" unit="degC" /> 271 <field id="isfthermald_par" long_name="thermal driving of ice shelf melting" unit="degC" /> 272 <field id="isfgammat" long_name="Ice shelf heat-transfert velocity" unit="m/s" /> 273 <field id="isfgammas" long_name="Ice shelf salt-transfert velocity" unit="m/s" /> 274 <field id="ttbl_cav" long_name="temperature in Losch tbl" unit="degC" /> 275 <field id="ttbl_par" long_name="temperature in the parametrisation boundary layer" unit="degC" /> 276 <field id="stbl" long_name="salinity in the Losh tbl" unit="1e-3" /> 277 <field id="utbl" long_name="zonal current in the Losh tbl at T point" unit="m/s" /> 278 <field id="vtbl" long_name="merid current in the Losh tbl at T point" unit="m/s" /> 279 <field id="isfustar" long_name="ustar at T point used in ice shelf melting" unit="m/s" /> 242 280 243 281 </field_group> <!-- grid_T --> … … 276 314 <field id="dh" long_name="Pycnocline thickness" unit=" m" /> 277 315 <field id="ibld" long_name="index of boundary layer depth" unit="#" /> 278 <field id="imld" long_name="index of mixed layer depth" unit="#" /> 279 <field id="zhbl" long_name="boundary layer depth -grid" unit="m" /> 280 <field id="zhml" long_name="mixed layer depth - grid" unit="m" /> 316 <field id="imld" long_name="index of mixed layer depth" unit="#" /> 317 <field id="jp_ext" long_name="flag =1 if pycnocline well resolved" unit="#" /> 318 <field id="j_ddh" long_name="index of mixed layer depth" unit="#" /> 319 <field id="zshear" long_name="shear production of TKE " unit="m^3/s^3" /> 320 <field id="zhbl" long_name="boundary layer depth -grid" unit="m" /> 321 <field id="zhml" long_name="mixed layer depth - grid" unit="m" /> 281 322 <field id="zdh" long_name="Pycnocline depth - grid" unit=" m" /> 282 323 <field id="zustke" long_name="magnitude of stokes drift at T-points" unit="m/s" /> 283 <field id="us_x" long_name="i component of active Stokes drift"unit="m/s" />284 <field id="us_y" long_name="j component of active Stokes drift"unit="m/s" />324 <field id="us_x" long_name="i component of active Stokes drift" unit="m/s" /> 325 <field id="us_y" long_name="j component of active Stokes drift" unit="m/s" /> 285 326 <field id="dstokes" long_name="stokes drift depth scale" unit="m" /> 286 327 <field id="zwth0" long_name="surface non-local temperature flux" unit="deg m/s" /> 287 328 <field id="zws0" long_name="surface non-local salinity flux" unit="psu m/s" /> 329 <field id="zwb0" long_name="surface non-local buoyancy flux" unit="m^2/s^3" /> 288 330 <field id="zwstrc" long_name="convective velocity scale" unit="m/s" /> 289 331 <field id="zustar" long_name="friction velocity" unit="m/s" /> … … 296 338 297 339 <!-- interior BL OSMOSIS diagnostics --> 298 <field id="zw thav" long_name="av turb flux of T in ml" unit="deg m/s" />340 <field id="zwbav" long_name="av turb flux of buoyancy in ml" unit="m^2/s^3" /> 299 341 <field id="zt_ml" long_name="av T in ml" unit="deg" /> 300 342 <field id="zhol" long_name="Hoenekker number" unit="#" /> … … 303 345 <field id="zwb_ent" long_name="entrainment turb flux of buoyancy" unit="m^2/s^-3" /> 304 346 305 <field id="zdt_bl" long_name="temperature jump at base of BL" unit="deg" /> 306 <field id="zds_bl" long_name="salinity jump at base of BL" unit="10^-3" /> 307 <field id="zdb_bl" long_name="buoyancy jump at base of BL" unit="m/s^2" /> 308 <field id="zdu_bl" long_name="u jump at base of BL" unit="m/s" /> 309 <field id="zdv_bl" long_name="v jump at base of BL" unit="m/s" /> 310 347 <field id="zdt_bl" long_name="temperature jump at base of BL" unit="deg" /> 348 <field id="zds_bl" long_name="salinity jump at base of BL" unit="10^-3" /> 349 <field id="zdb_bl" long_name="buoyancy jump at base of BL" unit="m/s^2" /> 350 <field id="zdu_bl" long_name="u jump at base of BL" unit="m/s" /> 351 <field id="zdv_bl" long_name="v jump at base of BL" unit="m/s" /> 352 <field id="zdt_ml" long_name="temperature jump at base of ML" unit="deg" /> 353 <field id="zds_ml" long_name="salinity jump at base of ML" unit="10^-3" /> 354 <field id="zdb_ml" long_name="buoyancy jump at base of ML" unit="m/s^2" /> 355 <field id="pb_coup" long_name="bottom coupling velocity" unit="m/s" /> 311 356 <!-- extra OSMOSIS diagnostics for debugging --> 312 357 <field id="zsc_uw_1_0" long_name="zsc u-momentum flux on T after Stokes" unit="m^2/s^2" /> … … 315 360 <field id="zsc_uw_2_f" long_name="2nd zsc u-momentum flux on T after Coriolis" unit="m^2/s^2" /> 316 361 <field id="zsc_vw_2_f" long_name="2nd zsc v-momentum flux on T after Coriolis" unit="m^2/s^2" /> 317 <field id="zuw_bse" long_name="base u-flux T-points" unit="m^2/s^2" />318 <field id="zvw_bse" long_name="base v-flux T-points" unit="m^2/s^2" />319 362 320 363 <!-- FK_OSM OSMOSIS diagnostics (require also ln_osm_mle=.true.--> … … 375 418 <field id="emp_oce" long_name="Evap minus Precip over ocean" standard_name="evap_minus_precip_over_sea_water" unit="kg/m2/s" /> 376 419 <field id="emp_ice" long_name="Evap minus Precip over ice" standard_name="evap_minus_precip_over_sea_ice" unit="kg/m2/s" /> 377 <field id="saltflx" long_name="Downward salt flux" unit=" 1e-3/m2/s"/>420 <field id="saltflx" long_name="Downward salt flux" unit="g/m2/s" /> 378 421 <field id="fmmflx" long_name="Water flux due to freezing/melting" unit="kg/m2/s" /> 379 422 <field id="snowpre" long_name="Snow precipitation" standard_name="snowfall_flux" unit="kg/m2/s" /> … … 394 437 <!-- * variable relative to atmospheric pressure forcing : available with ln_apr_dyn --> 395 438 <field id="ssh_ib" long_name="Inverse barometer sea surface height" standard_name="sea_surface_height_correction_due_to_air_pressure_at_low_frequency" unit="m" /> 396 397 <!-- * variable related to ice shelf forcing * -->398 <field id="isftfrz_cav" long_name="freezing point temperature at ocean/isf interface" unit="degC" />399 <field id="isftfrz_par" long_name="freezing point temperature in the parametrization boundary layer" unit="degC" />400 <field id="fwfisf_cav" long_name="Ice shelf melt rate" unit="kg/m2/s" />401 <field id="fwfisf_par" long_name="Ice shelf melt rate" unit="kg/m2/s" />402 <field id="qoceisf_cav" long_name="Ice shelf ocean heat flux" unit="W/m2" />403 <field id="qoceisf_par" long_name="Ice shelf ocean heat flux" unit="W/m2" />404 <field id="qlatisf_cav" long_name="Ice shelf latent heat flux" unit="W/m2" />405 <field id="qlatisf_par" long_name="Ice shelf latent heat flux" unit="W/m2" />406 <field id="qhcisf_cav" long_name="Ice shelf heat content flux of injected water" unit="W/m2" />407 <field id="qhcisf_par" long_name="Ice shelf heat content flux of injected water" unit="W/m2" />408 <field id="fwfisf3d_cav" long_name="Ice shelf melt rate" unit="kg/m2/s" grid_ref="grid_T_3D" />409 <field id="fwfisf3d_par" long_name="Ice shelf melt rate" unit="kg/m2/s" grid_ref="grid_T_3D" />410 <field id="qoceisf3d_cav" long_name="Ice shelf ocean heat flux" unit="W/m2" grid_ref="grid_T_3D" />411 <field id="qoceisf3d_par" long_name="Ice shelf ocean heat flux" unit="W/m2" grid_ref="grid_T_3D" />412 <field id="qlatisf3d_cav" long_name="Ice shelf latent heat flux" unit="W/m2" grid_ref="grid_T_3D" />413 <field id="qlatisf3d_par" long_name="Ice shelf latent heat flux" unit="W/m2" grid_ref="grid_T_3D" />414 <field id="qhcisf3d_cav" long_name="Ice shelf heat content flux of injected water" unit="W/m2" grid_ref="grid_T_3D" />415 <field id="qhcisf3d_par" long_name="Ice shelf heat content flux of injected water" unit="W/m2" grid_ref="grid_T_3D" />416 <field id="ttbl_cav" long_name="temperature in Losch tbl" unit="degC" />417 <field id="ttbl_par" long_name="temperature in the parametrisation boundary layer" unit="degC" />418 <field id="isfthermald_cav" long_name="thermal driving of ice shelf melting" unit="degC" />419 <field id="isfthermald_par" long_name="thermal driving of ice shelf melting" unit="degC" />420 <field id="isfgammat" long_name="Ice shelf heat-transfert velocity" unit="m/s" />421 <field id="isfgammas" long_name="Ice shelf salt-transfert velocity" unit="m/s" />422 <field id="stbl" long_name="salinity in the Losh tbl" unit="1e-3" />423 <field id="utbl" long_name="zonal current in the Losh tbl at T point" unit="m/s" />424 <field id="vtbl" long_name="merid current in the Losh tbl at T point" unit="m/s" />425 <field id="isfustar" long_name="ustar at T point used in ice shelf melting" unit="m/s" />426 <field id="qconisf" long_name="Conductive heat flux through the ice shelf" unit="W/m2" />427 439 428 440 <!-- *_oce variables available with ln_blk_clio or ln_blk_core --> … … 475 487 <field id="hflx_rain_cea" long_name="heat flux due to rainfall" standard_name="temperature_flux_due_to_rainfall_expressed_as_heat_flux_into_sea_water" unit="W/m2" /> 476 488 <field id="hflx_evap_cea" long_name="heat flux due to evaporation" standard_name="temperature_flux_due_to_evaporation_expressed_as_heat_flux_out_of_sea_water" unit="W/m2" /> 489 <field id="hflx_subl_cea" long_name="heat flux due to sublimation (from atm. forcings)" standard_name="temperature_flux_due_to_sublimation_expressed_as_heat_flux_out_of_sea_ice" unit="W/m2" /> 477 490 <field id="hflx_prec_cea" long_name="heat flux due to all precip" standard_name="temperature_flux_due_to_all_precip_expressed_as_heat_flux_into_sea_water" unit="W/m2" /> 478 491 <field id="hflx_snow_cea" long_name="heat flux due to snow falling" standard_name="heat_flux_onto_ocean_and_ice_due_to_snow_thermodynamics" unit="W/m2" /> … … 481 494 <field id="hflx_ice_cea" long_name="heat flux due to ice thermodynamics" standard_name="heat_flux_into_sea_water_due_to_sea_ice_thermodynamics" unit="W/m2" /> 482 495 <field id="hflx_rnf_cea" long_name="heat flux due to runoffs" standard_name="temperature_flux_due_to_runoff_expressed_as_heat_flux_into_sea_water" unit="W/m2" /> 496 <field id="sflx_rnf_cea" long_name="salt flux due to runoffs" standard_name="salt_flux_due_to_runoffs" unit="g/m2/s" /> 483 497 <field id="hflx_cal_cea" long_name="heat flux due to calving" standard_name="heat_flux_into_sea_water_due_to_calving" unit="W/m2" /> 484 498 <field id="hflx_icb_cea" long_name="heat flux due to iceberg" standard_name="heat_flux_into_sea_water_due_to_icebergs" unit="W/m2" /> … … 490 504 <field id="ticemel_cea" long_name="Rate of Melt at Upper Surface of Sea Ice (cell average)" standard_name="tendency_of_sea_ice_amount_due_to_surface_melting" unit="kg/m2/s" /> 491 505 506 <!-- fluxes from relaxation and freshwater budget --> 507 <field id="sflx_ssr_cea" long_name="salt flux due to restoring" standard_name="salt_flux_due_to_restoring" unit="g/m2/s" /> 508 <field id="hflx_ssr_cea" long_name="heat flux due to restoring" standard_name="heat_flux_due_to_restoring" unit="W/m2" /> 509 <field id="vflx_ssr_cea" long_name="volume flux due to restoring" standard_name="volume_flux_due_to_restoring" unit="kg/m2/s" /> 510 <field id="hflx_fwb_cea" long_name="heat flux due to fwb" standard_name="heat_flux_due_to_fwb" unit="W/m2" /> 511 <field id="vflx_fwb_cea" long_name="volume flux due to fwb" standard_name="volume_flux_due_to_fwb" unit="kg/m2/s" /> 512 492 513 <!-- ice field (nn_ice=1) --> 493 514 <field id="ice_cover" long_name="Ice fraction" standard_name="sea_ice_area_fraction" unit="1" /> … … 576 597 577 598 <field id="ssu" long_name="ocean surface current along i-axis" unit="m/s" /> 578 <field id="sbu" long_name="ocean bottom current along i-axis" unit="m/s" 599 <field id="sbu" long_name="ocean bottom current along i-axis" unit="m/s" grid_ref="grid_U_2D_inner" /> 579 600 <field id="ubar" long_name="ocean barotropic current along i-axis" unit="m/s" /> 580 601 <field id="uocetr_eff" long_name="Effective ocean transport along i-axis" standard_name="ocean_volume_x_transport" unit="m3/s" grid_ref="grid_U_3D" /> … … 615 636 616 637 <!-- variables available with diaar5 --> 617 <field id="u_masstr" long_name="Ocean Mass X Transport" standard_name="ocean_mass_x_transport" unit="kg/s" grid_ref="grid_U_3D" />618 <field id="u_masstr_vint" long_name="vertical integral of ocean eulerian mass transport along i-axis" standard_name="vertical_integral_of_ocean_mass_x_transport" unit="kg/s" 619 <field id="u_heattr" long_name="ocean eulerian heat transport along i-axis" standard_name="ocean_heat_x_transport" unit="W" 620 <field id="u_salttr" long_name="ocean eulerian salt transport along i-axis" standard_name="ocean_salt_x_transport" unit="1e-3*kg/s" 638 <field id="u_masstr" long_name="Ocean Mass X Transport" standard_name="ocean_mass_x_transport" unit="kg/s" grid_ref="grid_U_3D" /> 639 <field id="u_masstr_vint" long_name="vertical integral of ocean eulerian mass transport along i-axis" standard_name="vertical_integral_of_ocean_mass_x_transport" unit="kg/s" grid_ref="grid_U_2D_inner" /> 640 <field id="u_heattr" long_name="ocean eulerian heat transport along i-axis" standard_name="ocean_heat_x_transport" unit="W" grid_ref="grid_U_2D_inner" /> 641 <field id="u_salttr" long_name="ocean eulerian salt transport along i-axis" standard_name="ocean_salt_x_transport" unit="1e-3*kg/s" grid_ref="grid_U_2D_inner" /> 621 642 <field id="uadv_heattr" long_name="ocean advective heat transport along i-axis" standard_name="advectice_ocean_heat_x_transport" unit="W" /> 622 643 <field id="uadv_salttr" long_name="ocean advective salt transport along i-axis" standard_name="advectice_ocean_salt_x_transport" unit="1e-3*kg/s" /> … … 636 657 <field id="voce_e3v" long_name="ocean current along j-axis (thickness weighted)" unit="m/s" grid_ref="grid_V_3D" > voce * e3v </field> 637 658 <field id="ssv" long_name="ocean surface current along j-axis" unit="m/s" /> 638 <field id="sbv" long_name="ocean bottom current along j-axis" unit="m/s" 659 <field id="sbv" long_name="ocean bottom current along j-axis" unit="m/s" grid_ref="grid_V_2D_inner" /> 639 660 <field id="vbar" long_name="ocean barotropic current along j-axis" unit="m/s" /> 640 661 <field id="vocetr_eff" long_name="Effective ocean transport along j-axis" standard_name="ocean_volume_y_transport" unit="m3/s" grid_ref="grid_V_3D" /> … … 677 698 <!-- variables available with diaar5 --> 678 699 <field id="v_masstr" long_name="ocean eulerian mass transport along j-axis" standard_name="ocean_mass_y_transport" unit="kg/s" grid_ref="grid_V_3D" /> 679 <field id="v_heattr" long_name="ocean eulerian heat transport along j-axis" standard_name="ocean_heat_y_transport" unit="W" 680 <field id="v_salttr" long_name="ocean eulerian salt transport along i-axis" standard_name="ocean_salt_y_transport" unit="1e-3*kg/s" 700 <field id="v_heattr" long_name="ocean eulerian heat transport along j-axis" standard_name="ocean_heat_y_transport" unit="W" grid_ref="grid_V_2D_inner" /> 701 <field id="v_salttr" long_name="ocean eulerian salt transport along i-axis" standard_name="ocean_salt_y_transport" unit="1e-3*kg/s" grid_ref="grid_V_2D_inner" /> 681 702 <field id="vadv_heattr" long_name="ocean advective heat transport along j-axis" standard_name="advectice_ocean_heat_y_transport" unit="W" /> 682 703 <field id="vadv_salttr" long_name="ocean advective salt transport along j-axis" standard_name="advectice_ocean_salt_y_transport" unit="1e-3*kg/s" /> … … 737 758 <field id="bn2" long_name="squared Brunt-Vaisala frequency" unit="s-2" /> 738 759 760 <!-- dissipation diagnostics (note: ediss_k is only available with tke scheme) --> 761 <field id="avt_k" long_name="vertical eddy diffusivity from closure schemes" standard_name="ocean_vertical_eddy_diffusivity" unit="m2/s" /> 762 <field id="avm_k" long_name="vertical eddy viscosity from closure schemes" standard_name="ocean_vertical_eddy_viscosity" unit="m2/s" /> 763 <field id="ediss_k" long_name="Kolmogorov energy dissipation (tke scheme)" standard_name="Kolmogorov_energy_dissipation" unit="W/kg" /> 764 <field id="eshear_k" long_name="energy source from vertical shear" standard_name="energy_source_from_shear" unit="W/kg" /> 765 <field id="estrat_k" long_name="energy sink from stratification" standard_name="energy_sink_from_stratification" unit="W/kg" /> 766 739 767 </field_group> 740 768 … … 744 772 <field id="e3f_0" long_name="F-cell thickness" standard_name="cell_thickness" unit="m" grid_ref="grid_F_3D" /> 745 773 <field id="hf" long_name="water column height at F point" standard_name="water_column_height_F" unit="m" /> 746 <field id="ssKEf" long_name="surface kinetic energy at F point" standard_name="specific_kinetic_energy_of_sea_water" unit="m2/s2" />747 <field id="ssrelvor" long_name="surface relative vorticity" standard_name="relative_vorticity" unit="1/s" 748 <field id="ssplavor" long_name="surface planetary vorticity" standard_name="planetary_vorticity" unit="1/s" 749 <field id="ssrelpotvor" long_name="surface relative potential vorticity" standard_name="relpot_vorticity" unit="1/m.s" 750 <field id="ssabspotvor" long_name="surface absolute potential vorticity" standard_name="abspot_vorticity" unit="1/m.s" 751 <field id="ssEns" long_name="surface enstrophy" standard_name="enstrophy" unit="1/m2.s2" 774 <field id="ssKEf" long_name="surface kinetic energy at F point" standard_name="specific_kinetic_energy_of_sea_water" unit="m2/s2" grid_ref="grid_F_2D_inner" /> 775 <field id="ssrelvor" long_name="surface relative vorticity" standard_name="relative_vorticity" unit="1/s" grid_ref="grid_F_2D_inner" /> 776 <field id="ssplavor" long_name="surface planetary vorticity" standard_name="planetary_vorticity" unit="1/s" /> 777 <field id="ssrelpotvor" long_name="surface relative potential vorticity" standard_name="relpot_vorticity" unit="1/m.s" grid_ref="grid_F_2D_inner" /> 778 <field id="ssabspotvor" long_name="surface absolute potential vorticity" standard_name="abspot_vorticity" unit="1/m.s" grid_ref="grid_F_2D_inner" /> 779 <field id="ssEns" long_name="surface enstrophy" standard_name="enstrophy" unit="1/m2.s2" grid_ref="grid_F_2D_inner" /> 752 780 </field_group> 753 781 … … 1092 1120 </field_group> 1093 1121 1122 <!-- shared variables available with TOP interface --> 1123 <field_group id="top_shared" grid_ref="grid_T_3D"> 1124 <field id="xeps" long_name="Broadband light attenuation" unit="-" /> 1125 <field id="Heup" long_name="Euphotic layer depth" unit="m" grid_ref="grid_T_2D" /> 1126 </field_group> 1127 1094 1128 1095 1129 <!-- … … 1209 1243 1210 1244 <!-- 25h diagnostic output --> 1211 <field_group id="25h_grid_T" grid_ref="grid_T_3D " operation="instant">1245 <field_group id="25h_grid_T" grid_ref="grid_T_3D_inner" operation="instant"> 1212 1246 <field id="temper25h" name="potential temperature 25h mean" unit="degC" /> 1213 1247 <field id="tempis25h" name="insitu temperature 25h mean" unit="degC" /> 1214 1248 <field id="salin25h" name="salinity 25h mean" unit="psu" /> 1215 <field id="ssh25h" name="sea surface height 25h mean" grid_ref="grid_T_2D " unit="m" />1216 </field_group> 1217 1218 <field_group id="25h_grid_U" grid_ref="grid_U_3D " operation="instant" >1249 <field id="ssh25h" name="sea surface height 25h mean" grid_ref="grid_T_2D_inner" unit="m" /> 1250 </field_group> 1251 1252 <field_group id="25h_grid_U" grid_ref="grid_U_3D_inner" operation="instant" > 1219 1253 <field id="vozocrtx25h" name="i current 25h mean" unit="m/s" /> 1220 1254 </field_group> 1221 1255 1222 <field_group id="25h_grid_V" grid_ref="grid_V_3D " operation="instant">1256 <field_group id="25h_grid_V" grid_ref="grid_V_3D_inner" operation="instant"> 1223 1257 <field id="vomecrty25h" name="j current 25h mean" unit="m/s" /> 1224 1258 </field_group> 1225 1259 1226 <field_group id="25h_grid_W" grid_ref="grid_W_3D " operation="instant">1260 <field_group id="25h_grid_W" grid_ref="grid_W_3D_inner" operation="instant"> 1227 1261 <field id="vovecrtz25h" name="k current 25h mean" unit="m/s" /> 1228 1262 <field id="avt25h" name="vertical diffusivity25h mean" unit="m2/s" /> … … 1253 1287 </field_group> 1254 1288 1289 <!--============================--> 1290 <!-- CONSERVATION diagnostics --> 1291 <!--============================--> 1292 <!-- BE CAREFUL: this group (OCE_budget) cannot be called in file_def.xml as such (unless nn_fsbc=1) 1293 If doing so, the last output (in time) of the netcdf file 1294 would be corrupted (NaN values). However calling each of these 1295 variables directly in the file_def.xml works. It is probably 1296 because there is a mix up of sbc variables with other variables 1297 --> 1298 <field_group id="OCE_budget" grid_ref="grid_T_2D" > 1299 <field field_ref="sst" name="tos" /> 1300 <field field_ref="sss" name="sos" /> 1301 <field field_ref="ssh" name="zos" /> 1302 <!-- mass flux --> 1303 <field field_ref="empmr" name="empmr" /> 1304 <field field_ref="runoffs" name="runoffs" /> 1305 <field field_ref="emp_ice" name="emp_ice" /> 1306 <field field_ref="emp_oce" name="emp_oce" /> 1307 <field field_ref="iceshelf_cea" name="iceshelf" /> 1308 <field field_ref="iceberg_cea" name="iceberg" /> 1309 <field field_ref="calving_cea" name="calving" /> 1310 <!-- <field field_ref="berg_floating_melt" name="calving" /> --> 1311 <field field_ref="precip" name="precip" /> 1312 <field field_ref="snowpre" name="snowpre" /> 1313 <field field_ref="rain" name="rain" /> 1314 <field field_ref="evap_ao_cea" name="evap_ao" /> 1315 <field field_ref="subl_ai_cea" name="subl_ai" /> 1316 <field field_ref="snow_ai_cea" name="snow_ai" /> 1317 <field field_ref="snow_ao_cea" name="snow_ao" /> 1318 <!-- heat flux --> 1319 <field field_ref="qsr" name="qsr" /> 1320 <field field_ref="qns" name="qns" /> 1321 <field field_ref="qt_oce" name="qt_oce" /> 1322 <field field_ref="qemp_oce" name="qemp_oce" /> 1323 <field field_ref="hflx_rain_cea" name="hflx_rain" /> 1324 <field field_ref="hflx_evap_cea" name="hflx_evap" /> 1325 <field field_ref="hflx_snow_cea" name="hflx_snow" /> 1326 <field field_ref="hflx_snow_ao_cea" name="hflx_snow_ao" /> 1327 <field field_ref="hflx_snow_ai_cea" name="hflx_snow_ai" /> 1328 <field field_ref="hflx_rnf_cea" name="hflx_rnf" /> 1329 <field field_ref="hflx_icb_cea" name="hflx_icb" /> 1330 <field field_ref="hflx_isf_cea" name="hflx_isf" /> 1331 <!-- salt flux (includes ssr) --> 1332 <field field_ref="saltflx" name="saltflx" /> 1333 <field field_ref="sflx_rnf_cea" name="sflx_rnf" /> 1334 <!-- relaxation and damping --> 1335 <field field_ref="hflx_ssr_cea" name="hflx_ssr" /> 1336 <field field_ref="vflx_ssr_cea" name="vflx_ssr" /> 1337 <field field_ref="sflx_ssr_cea" name="sflx_ssr" /> 1338 <field field_ref="hflx_dmp_cea" name="hflx_dmp" /> 1339 <field field_ref="sflx_dmp_cea" name="sflx_dmp" /> 1340 <field field_ref="hflx_fwb_cea" name="hflx_fwb" /> 1341 <field field_ref="vflx_fwb_cea" name="vflx_fwb" /> 1342 </field_group> 1343 1344 <field_group id="OCE_globalbudget" grid_ref="grid_scalar" > 1345 <field field_ref="voltot" name="scvoltot" /> 1346 <field field_ref="saltot" name="scsaltot" /> 1347 <field field_ref="temptot" name="sctemtot" /> 1348 </field_group> 1349 1350 1255 1351 </field_definition> -
NEMO/branches/2021/dev_r14318_RK3_stage1/cfgs/SHARED/field_def_nemo-pisces.xml
r14209 r15574 136 136 <field id="SedpH" long_name="PH" unit="1" /> 137 137 <field id="SedCO3por" long_name="Bicarbonates" unit="mol/m3" /> 138 <field id="Sedligand" long_name="Ligands" unit="mol/m3" /> 139 <field id="SaturCO3" long_name="CO3 Saturation" unit="-" /> 138 140 </field_group> 139 141 140 142 <!-- SEDIMENT additional variables on T sediment grid --> 141 143 <field_group id="Diag_S" grid_ref="grid_T_2D"> 142 <field id="FlxSi" long_name="Si sediment flux" unit="mol/cm2/s" /> 143 <field id="FlxO2" long_name="O2 sediment flux" unit="mol/cm2/s" /> 144 <field id="FlxDIC" long_name="DIC sediment flux" unit="mol/cm2/s" /> 145 <field id="FlxNO3" long_name="NO3 sediment flux" unit="mol/cm2/s" /> 146 <field id="FlxPO4" long_name="PO4 sediment flux" unit="mol/cm2/s" /> 147 <field id="FlxAlkalini" long_name="Alkalinity sediment flux" unit="mol/cm2/s" /> 148 <field id="FlxNH4" long_name="Ammonium sediment flux" unit="mol/cm2/s" /> 149 <field id="FlxH2S" long_name="H2S sediment flux" unit="mol/cm2/s" /> 150 <field id="FlxSO4" long_name="SO4 sediment flux" unit="mol/cm2/s" /> 151 <field id="FlxFe2" long_name="Fe2+ sediment flux" unit="mol/cm2/s" /> 152 <field id="Flxtot" long_name="Sediment net burial rate" unit="cm/s" /> 153 <field id="dzdep" long_name="Sedimentation rate" unit="cm/s" /> 154 <field id="sflxclay" long_name="Clay sedimentation rate" unit="g/m2/s" /> 155 <field id="sflxcal" long_name="Calcite sedimentation rate" unit="mol/m2/s" /> 156 <field id="sflxbsi" long_name="BSi Sedimentation rate" unit="mol/m2/s" /> 157 <field id="sflxpoc" long_name="POC Sedimentation rate" unit="mol/m2/s" /> 158 <field id="sflxfeo" long_name="Fe(OH)3 Sedimentation rate" unit="mol/m2/s" /> 144 <field id="FlxSi" long_name="Si sediment flux" unit="mol/cm2/s" /> 145 <field id="FlxO2" long_name="O2 sediment flux" unit="mol/cm2/s" /> 146 <field id="FlxDIC" long_name="DIC sediment flux" unit="mol/cm2/s" /> 147 <field id="FlxNO3" long_name="NO3 sediment flux" unit="mol/cm2/s" /> 148 <field id="FlxPO4" long_name="PO4 sediment flux" unit="mol/cm2/s" /> 149 <field id="FlxAlkalini" long_name="Alkalinity sediment flux" unit="mol/cm2/s" /> 150 <field id="FlxNH4" long_name="Ammonium sediment flux" unit="mol/cm2/s" /> 151 <field id="FlxH2S" long_name="H2S sediment flux" unit="mol/cm2/s" /> 152 <field id="FlxSO4" long_name="SO4 sediment flux" unit="mol/cm2/s" /> 153 <field id="FlxFe2" long_name="Fe2+ sediment flux" unit="mol/cm2/s" /> 154 <field id="FlxLig" long_name="Ligand sediment flux" unit="mol/cm2/s" /> 155 <field id="dzdep" long_name="Sedimentation rate" unit="cm/s" /> 156 <field id="sflxclay" long_name="Clay sedimentation rate" unit="g/cm2/s" /> 157 <field id="sflxbsi" long_name="BSi sedimentation rate" unit="g/cm2/s" /> 158 <field id="sflxpoc" long_name="POC sedimentation rate" unit="g/cm2/s" /> 159 <field id="sflxcal" long_name="Calcite sedimentation rate" unit="g/cm2/s" /> 160 <field id="sflxfeo" long_name="Fe(OH)3 Sedimentation rate" unit="mol/cm2/s" /> 161 <field id="FlxClay" long_name="Clay burial rate" unit="g/cm2/s" /> 162 <field id="FlxCaCO3" long_name="Calcite burial rate" unit="g/cm2/s" /> 163 <field id="FlxBSi" long_name="BSi burial rate" unit="g/cm2/s" /> 164 <field id="FlxPOC" long_name="POC burial rate" unit="g/cm2/s" /> 165 <field id="FlxFeO" long_name="Fe(OH)3 burial rate" unit="g/cm2/s" /> 166 <field id="FlxFeS" long_name="FeS burial rate" unit="g/cm2/s" /> 167 <field id="FlxPOR" long_name="POR burial rate" unit="g/cm2/s" /> 168 <field id="FlxPOS" long_name="POS burial rate" unit="g/cm2/s" /> 169 <field id="Flxtot" long_name="total burial flux" unit="g/cm2/s" /> 170 <field id="Rstepros" long_name="Number of iterations" unit="-" /> 159 171 </field_group> 160 172 … … 205 217 <field id="SIZEP" long_name="Mean relative size of picophyto." unit="-" grid_ref="grid_T_3D" /> 206 218 <field id="SIZED" long_name="Mean relative size of diatoms" unit="-" grid_ref="grid_T_3D" /> 219 <field id="RASSD" long_name="Size of the protein machinery (Diat.)" unit="-" grid_ref="grid_T_3D" /> 220 <field id="RASSN" long_name="Size of the protein machinery (Nano.)" unit="-" grid_ref="grid_T_3D" /> 221 <field id="RASSP" long_name="Size of the protein machinery (Pico.)" unit="-" grid_ref="grid_T_3D" /> 207 222 <field id="Fe3" long_name="Iron III concentration" unit="nmol/m3" grid_ref="grid_T_3D" /> 208 223 <field id="FeL1" long_name="Complexed Iron concentration with L1" unit="nmol/m3" grid_ref="grid_T_3D" /> … … 241 256 <field id="BACT" long_name="Bacterial Biomass" unit="mmol/m3" grid_ref="grid_T_3D" /> 242 257 <field id="FEBACT" long_name="Bacterial uptake of Fe" unit="molFe/m3/s" grid_ref="grid_T_3D" /> 258 <field id="FEPREC" long_name="Precipitation of Fe" unit="molFe/m3/s" grid_ref="grid_T_3D" /> 243 259 <field id="LPRODR" long_name="OM remineralisation ligand production rate" unit="nmol-L/m3/s" grid_ref="grid_T_3D" /> 244 260 <field id="LPRODP" long_name="phytoplankton ligand production rate" unit="nmol-L/m3/s" grid_ref="grid_T_3D" /> -
NEMO/branches/2021/dev_r14318_RK3_stage1/cfgs/SHARED/grid_def_nemo.xml
r14072 r15574 12 12 <domain domain_ref="grid_T" /> 13 13 </grid> 14 <grid id="grid_T_2D_inner" > 15 <domain domain_ref="grid_T_inner" /> 16 </grid> 14 17 <!-- --> 15 18 <grid id="grid_T_ncatice" > … … 17 20 <axis axis_ref="ncatice" /> 18 21 </grid> 22 <grid id="grid_T_ncatice_inner" > 23 <domain domain_ref="grid_T_inner" /> 24 <axis axis_ref="ncatice" /> 25 </grid> 19 26 <!-- --> 20 27 <grid id="grid_T_3D" > … … 22 29 <axis axis_ref="deptht" /> 23 30 </grid> 31 <grid id="grid_T_3D_inner" > 32 <domain domain_ref="grid_T_inner" /> 33 <axis axis_ref="deptht" /> 34 </grid> 24 35 <!-- --> 25 36 <grid id="grid_T_3DS" > … … 27 38 <axis axis_ref="profsed" /> 28 39 </grid> 40 <grid id="grid_T_3DS_inner" > 41 <domain domain_ref="grid_T_inner" /> 42 <axis axis_ref="profsed" /> 43 </grid> 29 44 <!-- --> 30 45 <grid id="grid_U_2D" > 31 46 <domain domain_ref="grid_U" /> 32 47 </grid> 48 <grid id="grid_U_2D_inner" > 49 <domain domain_ref="grid_U_inner" /> 50 </grid> 33 51 <!-- --> 34 52 <grid id="grid_U_3D" > … … 36 54 <axis axis_ref="depthu" /> 37 55 </grid> 56 <grid id="grid_U_3D_inner" > 57 <domain domain_ref="grid_U_inner" /> 58 <axis axis_ref="depthu" /> 59 </grid> 38 60 <!-- --> 39 61 <grid id="grid_V_2D" > 40 62 <domain domain_ref="grid_V" /> 41 63 </grid> 64 <grid id="grid_V_2D_inner" > 65 <domain domain_ref="grid_V_inner" /> 66 </grid> 42 67 <!-- --> 43 68 <grid id="grid_V_3D" > 44 69 <domain domain_ref="grid_V" /> 70 <axis axis_ref="depthv" /> 71 </grid> 72 <grid id="grid_V_3D_inner" > 73 <domain domain_ref="grid_V_inner" /> 45 74 <axis axis_ref="depthv" /> 46 75 </grid> … … 48 77 <grid id="grid_W_2D" > 49 78 <domain domain_ref="grid_W" /> 79 </grid> 80 <grid id="grid_W_2D_inner" > 81 <domain domain_ref="grid_W_inner" /> 50 82 </grid> 51 83 <!-- --> … … 54 86 <axis axis_ref="depthw" /> 55 87 </grid> 88 <grid id="grid_W_3D_inner" > 89 <domain domain_ref="grid_W_inner" /> 90 <axis axis_ref="depthw" /> 91 </grid> 56 92 <!-- --> 57 93 <grid id="grid_F_2D" > 58 94 <domain domain_ref="grid_F" /> 95 </grid> 96 <grid id="grid_F_2D_inner" > 97 <domain domain_ref="grid_F_inner" /> 59 98 </grid> 60 99 <!-- --> … … 63 102 <axis axis_ref="depthf" /> 64 103 </grid> 104 <grid id="grid_F_3D_inner" > 105 <domain domain_ref="grid_F_inner" /> 106 <axis axis_ref="depthf" /> 107 </grid> 65 108 <!-- --> 66 109 <grid id="grid_1point" > … … 77 120 </grid> 78 121 <!-- --> 79 80 122 81 123 <grid id="grid_znl_T_2D"> -
NEMO/branches/2021/dev_r14318_RK3_stage1/cfgs/SHARED/namelist_ice_ref
r14247 r15574 73 73 !------------------------------------------------------------------------------ 74 74 ! -- ice_rdgrft_strength -- ! 75 ln_str_H79 = .true. ! ice strength param.: Hibler_79 => P = pstar*<h>*exp(-c_rhg*A) 75 ln_str_H79 = .true. ! ice strength param.: Hibler_79 => P = pstar*<h>*exp(-c_rhg*A) 76 76 rn_pstar = 2.0e+04 ! ice strength thickness parameter [N/m2] 77 77 rn_crhg = 20.0 ! ice strength conc. parameter (-) 78 ln_str_R75 = .false. ! ice strength param.: Rothrock_75 => P = fn of potential energy 79 rn_pe_rdg = 17.0 ! coef accouting for frictional dissipation 80 ln_str_CST = .false. ! ice strength param.: Constant 81 rn_str = 0.0 ! ice strength value 82 ln_str_smooth = .true. ! spatial smoothing of the ice strength 78 83 ! -- ice_rdgrft -- ! 84 ln_distf_lin = .true. ! redistribution function of ridged ice: linear (Hibler 1980) 85 ln_distf_exp = .false. ! redistribution function of ridged ice: exponential => not coded yet 86 rn_murdg = 3.0 ! e-folding scale of ridged ice (m**.5) 79 87 rn_csrdg = 0.5 ! fraction of shearing energy contributing to ridging 80 88 ! -- ice_rdgrft_prep -- ! … … 139 147 ln_cndflx = .false. ! Use conduction flux as surface boundary conditions (i.e. for Jules coupling) 140 148 ln_cndemulate = .false. ! emulate conduction flux (if not provided in the inputs) 141 nn_qtrice = 1! Solar flux transmitted thru the surface scattering layer:149 nn_qtrice = 0 ! Solar flux transmitted thru the surface scattering layer: 142 150 ! = 0 Grenfell and Maykut 1977 (depends on cloudiness and is 0 when there is snow) 143 151 ! = 1 Lebrun 2019 (equals 0.3 anytime with different melting/dry snw conductivities) … … 268 276 rn_alb_imlt = 0.50 ! bare puddled ice albedo : 0.49 -- 0.58 269 277 rn_alb_dpnd = 0.27 ! ponded ice albedo : 0.10 -- 0.30 278 rn_alb_hpiv = 1.00 ! pivotal ice thickness in m (above which albedo is constant) 270 279 / 271 280 !------------------------------------------------------------------------------ -
NEMO/branches/2021/dev_r14318_RK3_stage1/cfgs/SHARED/namelist_pisces_ref
r12845 r15574 14 14 !----------------------------------------------------------------------- 15 15 ln_p2z = .false. ! LOBSTER model used 16 ln_p4z = .true. 17 ln_p5z = .false. ! PISCES QUOTA model used16 ln_p4z = .true. ! PISCES model used 17 ln_p5z = .false. ! PISCES QUOTA model used 18 18 ln_ligand = .false. ! Enable organic ligands 19 19 ln_sediment = .false. ! Enable sediment module … … 34 34 ! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! 35 35 ! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! 36 sn_patm = 'presatm ' , -1 , 'patm' , .true. , .true. , 'yearly' , '' , '' , ''37 sn_atmco2 = 'presatmco2' , -1 36 sn_patm = 'presatm.orca2' , 24. , 'presatm' , .true. , .true. , 'yearly' , '' , '' , '' 37 sn_atmco2 = 'presatmco2' , -1. , 'xco2' , .true. , .true. , 'yearly' , '' , '' , '' 38 38 cn_dir = './' ! root directory for the location of the dynamical files 39 39 ! … … 44 44 &nampisbio ! biological parameters 45 45 !----------------------------------------------------------------------- 46 nrdttrc = 1 ! time step frequency for biology 47 wsbio = 2. ! POC sinking speed 48 xkmort = 2.E-7 ! half saturation constant for mortality 49 ferat3 = 10.E-6 ! Fe/C in zooplankton 50 wsbio2 = 50. ! Big particles sinking speed 51 wsbio2max = 50. ! Big particles maximum sinking speed 52 wsbio2scale = 5000. ! Big particles length scale of sinking 46 nrdttrc = 1 ! time step frequency for biology 47 wsbio = 2. ! POC sinking speed 48 xkmort = 1.E-7 ! half saturation constant for mortality 49 feratz = 10.E-6 ! Fe/C in zooplankton 50 feratm = 15.E-6 ! Fe/C in mesozooplankton 51 wsbio2 = 50. ! Big particles sinking speed 52 wsbio2max = 50. ! Big particles maximum sinking speed 53 wsbio2scale = 5000. ! Big particles length scale of sinking 53 54 ! ! ln_ligand enabled 54 ldocp = 1.E-4! Phyto ligand production per unit doc55 ldocz = 1.E-4! Zoo ligand production per unit doc56 lthet = 1.0! Proportional loss of ligands due to Fe uptake55 ldocp = 1.E-4 ! Phyto ligand production per unit doc 56 ldocz = 1.E-4 ! Zoo ligand production per unit doc 57 lthet = 1.0 ! Proportional loss of ligands due to Fe uptake 57 58 ! ! ln_p5z enabled 58 no3rat3 = 0.182! N/C ratio in zooplankton59 po4rat3 = 0.0094! P/C ratio in zooplankton59 no3rat3 = 0.151 ! N/C ratio in zooplankton 60 po4rat3 = 0.00943 ! P/C ratio in zooplankton 60 61 / 61 62 !----------------------------------------------------------------------- … … 64 65 concnno3 = 1.e-6 ! Nitrate half saturation of nanophytoplankton 65 66 concdno3 = 3.E-6 ! Nitrate half saturation for diatoms 66 concnnh4 = 1.E- 7! NH4 half saturation for phyto67 concdnh4 = 3.E- 7! NH4 half saturation for diatoms68 concnfer = 1. E-9! Iron half saturation for phyto69 concdfer = 3.E-9 ! Iron half saturation for diatoms70 concbfe = 1.E-11 ! Iron half-saturation for DOC remin.71 concbnh4 = 2.E-8! NH4 half saturation for DOC remin.72 concbno3 = 2.E-7 ! Nitrate half saturation for DOC remin.67 concnnh4 = 1.E-6 ! NH4 half saturation for phyto 68 concdnh4 = 3.E-6 ! NH4 half saturation for diatoms 69 concnfer = 1.7E-9 ! Iron half saturation for phyto 70 concdfer = 5.E-9 ! Iron half saturation for diatoms 71 concbfe = 3.E-11 ! Iron half-saturation for DOC remin. 72 concbnh4 = 3.E-7 ! NH4 half saturation for DOC remin. 73 concbno3 = 3.E-7 ! Nitrate half saturation for DOC remin. 73 74 xsizedia = 1.E-6 ! Minimum size criteria for diatoms 74 75 xsizephy = 1.E-6 ! Minimum size criteria for phyto 75 76 xsizern = 3.0 ! Size ratio for nanophytoplankton 76 xsizerd = 3.0 ! Size ratio for diatoms77 xksi1 = 2.E-6 ! half saturation constant for Si uptake77 xsizerd = 4.0 ! Size ratio for diatoms 78 xksi1 = 8.E-6 ! half saturation constant for Si uptake 78 79 xksi2 = 20E-6 ! half saturation constant for Si/C 79 80 xkdoc = 417.E-6 ! half-saturation constant of DOC remineralization 80 qnfelim = 7.E-6 ! Optimal quota of phyto 81 qdfelim = 7.E-6 ! Optimal quota of diatoms 81 qnfelim = 10.E-6 ! Optimal quota of phyto 82 qdfelim = 10.E-6 ! Optimal quota of diatoms 83 caco3r = 0.2 ! mean rain ratio 84 oxymin = 1.E-6 ! Half-saturation constant for anoxia 85 / 86 !----------------------------------------------------------------------- 87 &namp5zlim ! parameters for nutrient limitations PISCES QUOTA - ln_p5z 88 !----------------------------------------------------------------------- 89 concnno3 = 2e-6 ! Nitrate half saturation of nanophytoplankton 90 concpno3 = 7e-7 ! Nitrate half saturation of picophytoplankton 91 concdno3 = 3E-6 ! Phosphate half saturation for diatoms 92 concnnh4 = 2E-6 ! NH4 half saturation for phyto 93 concpnh4 = 7E-7 ! NH4 half saturation for picophytoplankton 94 concdnh4 = 3E-6 ! NH4 half saturation for diatoms 95 concnpo4 = 2E-6 ! PO4 half saturation for phyto 96 concppo4 = 7E-7 ! PO4 half saturation for picophytoplankton 97 concdpo4 = 3E-6 ! PO4 half saturation for diatoms 98 concnfer = 3E-9 ! Iron half saturation for phyto 99 concpfer = 1E-9 ! Iron half saturation for picophytoplankton 100 concdfer = 4.5E-9 ! Iron half saturation for diatoms 101 concbfe = 3E-11 ! Half-saturation for Fe limitation of Bacteria 102 concbnh4 = 4.E-7 ! NH4 half saturation for phyto 103 concbno3 = 4.E-7 ! Phosphate half saturation for diatoms 104 concbpo4 = 4.E-7 ! Phosphate half saturation for bacteria 105 xsizedia = 1.E-6 ! Minimum size criteria for diatoms 106 xsizephy = 1.E-6 ! Minimum size criteria for phyto 107 xsizepic = 5.E-7 ! Minimum size criteria for picophyto 108 xsizern = 3.0 ! Size ratio for nanophytoplankton 109 xsizerp = 2.0 ! Size ratio for picophytoplankton 110 xsizerd = 4.0 ! Size ratio for diatoms 111 xksi1 = 8.E-6 ! half saturation constant for Si uptake 112 xksi2 = 20E-6 ! half saturation constant for Si/C 113 xkdoc = 417.E-6 ! half-saturation constant of DOC remineralization 82 114 caco3r = 0.3 ! mean rain ratio 83 115 oxymin = 1.E-6 ! Half-saturation constant for anoxia 84 116 / 85 117 !----------------------------------------------------------------------- 86 &namp5zlim ! parameters for nutrient limitations PISCES QUOTA - ln_p5z87 !-----------------------------------------------------------------------88 concnno3 = 3e-6 ! Nitrate half saturation of nanophytoplankton89 concpno3 = 1e-690 concdno3 = 4E-6 ! Phosphate half saturation for diatoms91 concnnh4 = 1.5E-6 ! NH4 half saturation for phyto92 concpnh4 = 4E-793 concdnh4 = 2E-6 ! NH4 half saturation for diatoms94 concnpo4 = 3E-6 ! PO4 half saturation for phyto95 concppo4 = 1.5E-696 concdpo4 = 4E-6 ! PO4 half saturation for diatoms97 concnfer = 3E-9 ! Iron half saturation for phyto98 concpfer = 1.5E-999 concdfer = 4E-9 ! Iron half saturation for diatoms100 concbfe = 1.E-11 ! Half-saturation for Fe limitation of Bacteria101 concbnh4 = 1.E-7 ! NH4 half saturation for phyto102 concbno3 = 5.E-7 ! Phosphate half saturation for diatoms103 concbpo4 = 1E-7 ! Phosphate half saturation for bacteria104 xsizedia = 1.E-6 ! Minimum size criteria for diatoms105 xsizephy = 1.E-6 ! Minimum size criteria for phyto106 xsizepic = 1.E-6107 xsizern = 1.0 ! Size ratio for nanophytoplankton108 xsizerp = 1.0109 xsizerd = 4.0 ! Size ratio for diatoms110 xksi1 = 2.E-6 ! half saturation constant for Si uptake111 xksi2 = 20E-6 ! half saturation constant for Si/C112 xkdoc = 417.E-6 ! half-saturation constant of DOC remineralization113 caco3r = 0.35 ! mean rain ratio114 oxymin = 1.E-6 ! Half-saturation constant for anoxia115 /116 !-----------------------------------------------------------------------117 118 &namp5zquota ! parameters for nutrient limitations PISCES quota - ln_p5z 118 119 !----------------------------------------------------------------------- 119 qfnopt = 7.E-6! Optimal Fe quota of nanophyto120 qfpopt = 7.E-6! Optimal Fe quota of picophyto121 qfdopt = 7.E-6! Optimal quota of diatoms122 qnnmin = 0. 29! Minimal N quota for nano123 qnnmax = 1. 39! Maximal N quota for nano124 qpnmin = 0.2 8! Minimal P quota for nano125 qpnmax = 1. 06! Maximal P quota for nano126 qnpmin = 0.42 ! Minimal N quota for pico120 qfnopt = 12.E-6 ! Optimal Fe quota of nanophyto 121 qfpopt = 12.E-6 ! Optimal Fe quota of picophyto 122 qfdopt = 12.E-6 ! Optimal quota of diatoms 123 qnnmin = 0.61 ! Minimal N quota for nano 124 qnnmax = 1.25 ! Maximal N quota for nano 125 qpnmin = 0.24 ! Minimal P quota for nano 126 qpnmax = 1.35 ! Maximal P quota for nano 127 qnpmin = 1.02 ! Minimal N quota for pico 127 128 qnpmax = 1.39 ! Maximal N quota for pico 128 qppmin = 0. 25! Minimal P quota for pico129 qppmax = 0.7! Maximal P quota for pico130 qndmin = 0. 25! Minimal N quota for diatoms131 qndmax = 1. 39! Maximal N quota for diatoms132 qpdmin = 0.2 9! Minimal P quota for diatoms133 qpdmax = 1. 32! Maximal P quota for diatoms134 qfnmax = 40E-6 ! Maximal Fe quota for nano135 qfpmax = 40E-6 ! Maximal Fe quota for pico136 qfdmax = 40E-6 ! Maximal Fe quota for diatoms129 qppmin = 0.19 ! Minimal P quota for pico 130 qppmax = 1.15 ! Maximal P quota for pico 131 qndmin = 0.51 ! Minimal N quota for diatoms 132 qndmax = 1.25 ! Maximal N quota for diatoms 133 qpdmin = 0.24 ! Minimal P quota for diatoms 134 qpdmax = 1.525 ! Maximal P quota for diatoms 135 qfnmax = 60E-6 ! Maximal Fe quota for nano 136 qfpmax = 60E-6 ! Maximal Fe quota for pico 137 qfdmax = 60E-6 ! Maximal Fe quota for diatoms 137 138 / 138 139 !----------------------------------------------------------------------- … … 141 142 ! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! 142 143 ! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! 143 sn_par = 'par.orca' , 24 144 sn_par = 'par.orca' , 24. , 'fr_par' , .true. , .true. , 'yearly' , '' , '' , '' 144 145 cn_dir = './' ! root directory for the location of the dynamical files 145 146 ln_varpar = .true. ! boolean for PAR variable 146 147 parlux = 0.43 ! Fraction of shortwave as PAR 148 ln_p4z_dcyc = .false. ! Diurnal cycle in PISCES 147 149 / 148 150 !----------------------------------------------------------------------- … … 157 159 chlcnm = 0.033 ! Maximum Chl/C in nanophytoplankton 158 160 chlcdm = 0.05 ! Maximum Chl/C in diatoms 159 chlcmin = 0.00 4! Minimum Chl/c in phytoplankton160 fecnm = 40E-6 ! Maximum Fe/C in nanophytoplankton161 fecdm = 40E-6 ! Maximum Fe/C in diatoms162 grosip = 0.1 59! mean Si/C ratio161 chlcmin = 0.003 ! Minimum Chl/c in phytoplankton 162 fecnm = 60E-6 ! Maximum Fe/C in nanophytoplankton 163 fecdm = 60E-6 ! Maximum Fe/C in diatoms 164 grosip = 0.13 ! mean Si/C ratio 163 165 / 164 166 !----------------------------------------------------------------------- 165 167 &namp5zprod ! parameters for phytoplankton growth for PISCES quota- ln_p5z 166 168 !----------------------------------------------------------------------- 167 pislopen = 3. ! P-I slope168 pislopep = 3.! P-I slope for picophytoplankton169 pisloped = 3.! P-I slope for diatoms169 pislopen = 5 ! P-I slope of nanophytoplankton 170 pislopep = 5 ! P-I slope for picophytoplankton 171 pisloped = 5 ! P-I slope for diatoms 170 172 excretn = 0.05 ! excretion ratio of phytoplankton 171 173 excretp = 0.05 ! excretion ratio of picophytoplankton … … 173 175 xadap = 0. ! Adaptation factor to low light 174 176 bresp = 0.02 ! Basal respiration rate 175 thetannm = 0. 25! Maximum Chl/N in nanophytoplankton176 thetanpm = 0. 25! Maximum Chl/N in picophytoplankton177 thetandm = 0. 3! Maximum Chl/N in diatoms178 chlcmin = 0.00 4! Minimum Chl/c in phytoplankton179 grosip = 0.1 31! mean Si/C ratio177 thetannm = 0.3 ! Maximum Chl/N in nanophytoplankton 178 thetanpm = 0.3 ! Maximum Chl/N in picophytoplankton 179 thetandm = 0.4 ! Maximum Chl/N in diatoms 180 chlcmin = 0.003 ! Minimum Chl/c in phytoplankton 181 grosip = 0.12 ! mean Si/C ratio 180 182 / 181 183 !----------------------------------------------------------------------- 182 184 &namp4zmort ! parameters for phytoplankton sinks for PISCES std - ln_p4z 183 185 !----------------------------------------------------------------------- 184 wchl = 0.01 ! quadratic mortality of phytoplankton 185 wchld = 0.01 ! maximum quadratic mortality of diatoms 186 wchldm = 0.03 ! maximum quadratic mortality of diatoms 187 mprat = 0.01 ! phytoplankton mortality rate 188 mprat2 = 0.01 ! Diatoms mortality rate 186 wchln = 0.01 ! quadratic mortality of phytoplankton 187 wchld = 0.03 ! maximum quadratic mortality of diatoms 188 mpratn = 0.01 ! phytoplankton mortality rate 189 mpratd = 0.01 ! Diatoms mortality rate 189 190 / 190 191 !----------------------------------------------------------------------- … … 193 194 wchln = 0.01 ! quadratic mortality of nanophytoplankton 194 195 wchlp = 0.01 ! quadratic mortality of picophytoplankton 195 wchld = 0.01 ! maximum quadratic mortality of diatoms 196 wchldm = 0.02 ! maximum quadratic mortality of diatoms 196 wchld = 0.03 ! maximum quadratic mortality of diatoms 197 197 mpratn = 0.01 ! nanophytoplankton mortality rate 198 198 mpratp = 0.01 ! picophytoplankton mortality rate 199 mprat 2= 0.01 ! Diatoms mortality rate199 mpratd = 0.01 ! Diatoms mortality rate 200 200 / 201 201 !----------------------------------------------------------------------- 202 202 &namp4zmes ! parameters for mesozooplankton for PISCES std - ln_p4z 203 203 !----------------------------------------------------------------------- 204 part2 = 0.75 ! part of calcite not dissolved in mesozoo guts 205 grazrat2 = 0.75 ! maximal mesozoo grazing rate 206 resrat2 = 0.005 ! exsudation rate of mesozooplankton 207 mzrat2 = 0.03 ! mesozooplankton mortality rate 208 xpref2d = 1. ! mesozoo preference for diatoms 209 xpref2n = 0.3 ! mesozoo preference for nanophyto. 210 xpref2z = 1. ! mesozoo preference for microzoo. 211 xpref2c = 0.3 ! mesozoo preference for poc 212 xthresh2zoo = 1E-8 ! zoo feeding threshold for mesozooplankton 213 xthresh2dia = 1E-8 ! diatoms feeding threshold for mesozooplankton 214 xthresh2phy = 1E-8 ! nanophyto feeding threshold for mesozooplankton 215 xthresh2poc = 1E-8 ! poc feeding threshold for mesozooplankton 216 xthresh2 = 3E-7 ! Food threshold for grazing 217 xkgraz2 = 20.E-6 ! half saturation constant for meso grazing 218 epsher2 = 0.35 ! Efficicency of Mesozoo growth 219 epsher2min = 0.35 ! Minimum efficiency of mesozoo growth 220 sigma2 = 0.6 ! Fraction of mesozoo excretion as DOM 221 unass2 = 0.3 ! non assimilated fraction of P by mesozoo 222 grazflux = 3.e3 ! flux-feeding rate 204 part2 = 0.75 ! part of calcite not dissolved in mesozoo guts 205 grazrat2 = 0.5 ! maximal mesozoo grazing rate 206 resrat2 = 0.005 ! exsudation rate of mesozooplankton 207 mzrat2 = 0.01 ! mesozooplankton mortality rate 208 xpref2d = 1. ! mesozoo preference for diatoms 209 xpref2n = 0.3 ! mesozoo preference for nanophyto. 210 xpref2z = 1. ! mesozoo preference for microzoo. 211 xpref2c = 0.3 ! mesozoo preference for poc 212 xthresh2zoo = 1E-8 ! zoo feeding threshold for mesozooplankton 213 xthresh2dia = 1E-8 ! diatoms feeding threshold for mesozooplankton 214 xthresh2phy = 1E-8 ! nanophyto feeding threshold for mesozooplankton 215 xthresh2poc = 1E-8 ! poc feeding threshold for mesozooplankton 216 xthresh2 = 3E-7 ! Food threshold for grazing 217 xkgraz2 = 20.E-6 ! half saturation constant for meso grazing 218 epsher2 = 0.4 ! Efficicency of Mesozoo growth 219 epsher2min = 0.4 ! Minimum efficiency of mesozoo growth 220 sigma2 = 0.6 ! Fraction of mesozoo excretion as DOM 221 unass2 = 0.3 ! non assimilated fraction of P by mesozoo 222 grazflux = 3.e3 ! flux-feeding rate 223 xsigma2 = 0.5 ! Predation window size 224 xsigma2del = 1.0 ! Predation window size scaling 225 ln_dvm_meso = .false. ! Activates DVM for mesozooplankton 226 xfracmig = 0.3 ! Fraction of mesozooplankton performing DVM 223 227 / 224 228 !----------------------------------------------------------------------- 225 229 &namp5zmes ! parameters for mesozooplankton 226 230 !----------------------------------------------------------------------- 227 part2 = 0.75 ! part of calcite not dissolved in mesozoo guts228 grazrat2 = 0.85! maximal mesozoo grazing rate229 bmetexc2 = .true. ! Metabolic use of excess carbon230 resrat2 = 0.005 ! exsudation rate of mesozooplankton231 mzrat2 = 0.02! mesozooplankton mortality rate232 xpref2d = 1. ! zoo preference for phyto233 xpref2 p = 1. ! zoo preference for POC234 xpref2z = 1. ! zoo preference for zoo235 xpref2m = 0.2! meso preference for zoo236 xpref2c = 0.3 ! zoo preference for poc237 xthresh2zoo = 1E-8 ! zoo feeding threshold for mesozooplankton238 xthresh2dia = 1E-8 ! diatoms feeding threshold for mesozooplankton239 xthresh2phy = 1E-8 ! nanophyto feeding threshold for mesozooplankton240 xthresh2mes = 1E-8 ! meso feeding threshold for mesozooplankton241 xthresh2poc = 1E-8 ! poc feeding threshold for mesozooplankton231 part2 = 0.75 ! part of calcite not dissolved in mesozoo guts 232 grazrat2 = 0.5 ! maximal mesozoo grazing rate 233 bmetexc2 = .true. ! Metabolic use of excess carbon 234 resrat2 = 0.005 ! exsudation rate of mesozooplankton 235 mzrat2 = 0.01 ! mesozooplankton mortality rate 236 xpref2d = 1. ! meso preference for diatoms 237 xpref2n = 0.3 ! meso preference for nano 238 xpref2z = 1. ! meso preference for zoo 239 xpref2m = 0. ! meso preference for zoo 240 xpref2c = 0.3 ! meso preference for poc 241 xthresh2zoo = 1E-8 ! zoo feeding threshold for mesozooplankton 242 xthresh2dia = 1E-8 ! diatoms feeding threshold for mesozooplankton 243 xthresh2phy = 1E-8 ! nanophyto feeding threshold for mesozooplankton 244 xthresh2mes = 1E-8 ! meso feeding threshold for mesozooplankton 245 xthresh2poc = 1E-8 ! poc feeding threshold for mesozooplankton 242 246 xthresh2 = 3E-7 ! Food threshold for grazing 243 247 xkgraz2 = 20.E-6 ! half sturation constant for meso grazing 244 248 epsher2 = 0.5 ! Efficicency of Mesozoo growth 245 epsher2min = 0.2 ! Minimum efficiency of mesozoo growth 246 ssigma2 = 0.5 ! Fraction excreted as semi-labile DOM 247 srespir2 = 0.2 ! Active respiration 248 unass2c = 0.3 ! non assimilated fraction of P by mesozoo 249 unass2n = 0.3 ! non assimilated fraction of N by mesozoo 250 unass2p = 0.3 ! non assimilated fraction of P by mesozoo 251 grazflux = 3.e3 ! flux-feeding rate 249 epsher2min = 0.5 ! Minimum efficiency of mesozoo growth 250 ssigma2 = 0.5 ! Fraction excreted as semi-labile DOM 251 srespir2 = 0.2 ! Active respiration 252 unass2c = 0.3 ! non assimilated fraction of C by mesozoo 253 unass2n = 0.3 ! non assimilated fraction of N by mesozoo 254 unass2p = 0.3 ! non assimilated fraction of P by mesozoo 255 xsigma2 = 0.5 ! Predation window size 256 xsigma2del = 1.0 ! Predation window size scaling 257 grazflux = 3.e3 ! flux-feeding rate 258 ln_dvm_meso = .false. ! Activates DVM for mesozooplankton 259 xfracmig = 0.25 ! Fraction of mesozooplankton performing DVM 252 260 / 253 261 !----------------------------------------------------------------------- 254 262 &namp4zzoo ! parameters for microzooplankton for PISCES std - ln_p4z 255 263 !----------------------------------------------------------------------- 256 part = 0. 5! part of calcite not dissolved in microzoo guts257 grazrat = 3.0 ! maximal zoo grazing rate258 resrat = 0.0 3 ! exsudationrate of zooplankton259 mzrat = 0.00 4! zooplankton mortality rate260 xprefc = 0.1 ! Microzoo preference for POM264 part = 0.75 ! part of calcite not dissolved in microzoo guts 265 grazrat = 2.0 ! maximal zoo grazing rate 266 resrat = 0.02 ! Linear mortality rate of zooplankton 267 mzrat = 0.005 ! zooplankton mortality rate 268 xprefc = 0.15 ! Microzoo preference for POM 261 269 xprefn = 1. ! Microzoo preference for Nanophyto 262 xprefd = 0. 6! Microzoo preference for Diatoms270 xprefd = 0.8 ! Microzoo preference for Diatoms 263 271 xthreshdia = 1.E-8 ! Diatoms feeding threshold for microzooplankton 264 272 xthreshphy = 1.E-8 ! Nanophyto feeding threshold for microzooplankton … … 266 274 xthresh = 3.E-7 ! Food threshold for feeding 267 275 xkgraz = 20.E-6 ! half sturation constant for grazing 268 epsher = 0. 3! Efficiency of microzoo growth269 epshermin = 0. 3! Minimum efficiency of microzoo growth276 epsher = 0.4 ! Efficiency of microzoo growth 277 epshermin = 0.4 ! Minimum efficiency of microzoo growth 270 278 sigma1 = 0.6 ! Fraction of microzoo excretion as DOM 271 279 unass = 0.3 ! non assimilated fraction of phyto by zoo 280 xsigma = 0.5 ! Predation window size 281 xsigmadel = 1.0 ! Predation window size scaling 272 282 / 273 283 !----------------------------------------------------------------------- 274 284 &namp5zzoo ! parameters for microzooplankton 275 285 !----------------------------------------------------------------------- 276 part = 0. 5! part of calcite not dissolved in microzoo gutsa277 grazrat = 2. 75! maximal zoo grazing rate286 part = 0.75 ! part of calcite not dissolved in microzoo gutsa 287 grazrat = 2.0 ! maximal zoo grazing rate 278 288 bmetexc = .true. ! Metabolic use of excess carbon 279 resrat = 0.0 3! exsudation rate of zooplankton289 resrat = 0.02 ! exsudation rate of zooplankton 280 290 mzrat = 0.005 ! zooplankton mortality rate 281 xprefc = 0.1 282 xprefn = 1. 283 xprefp = 1. 6! Microzoo preference for picophyto291 xprefc = 0.15 ! Microzoo preference for POM 292 xprefn = 1.0 ! Microzoo preference for Nanophyto 293 xprefp = 1.0 ! Microzoo preference for picophyto 284 294 xprefd = 1.0 ! Microzoo preference for Diatoms 285 xprefz = 0. 3! Microzoo preference for microzooplankton295 xprefz = 0. ! Microzoo preference for microzooplankton 286 296 xthreshdia = 1.E-8 ! Diatoms feeding threshold for microzooplankton 287 297 xthreshphy = 1.E-8 ! Nanophyto feeding threshold for microzooplankton 288 xthreshpic = 1.E-8 289 xthreshzoo = 1.E-8 ! Nanophyto feeding threshold for microzooplankton298 xthreshpic = 1.E-8 ! Picophyto feeding threshold for microzooplankton 299 xthreshzoo = 1.E-8 ! Microzoo feeding threshold for microzooplankton 290 300 xthreshpoc = 1.E-8 ! POC feeding threshold for microzooplankton 291 301 xthresh = 3.E-7 ! Food threshold for feeding 292 xkgraz = 20.E-6 ! half s turation constant for grazing302 xkgraz = 20.E-6 ! half saturation constant for grazing 293 303 epsher = 0.5 ! Efficiency of microzoo growth 294 epshermin = 0. 2! Minimum efficiency of microzoo growth304 epshermin = 0.5 ! Minimum efficiency of microzoo growth 295 305 ssigma = 0.5 ! Fraction excreted as semi-labile DOM 296 306 srespir = 0.2 ! Active respiration 297 307 unassc = 0.3 ! non assimilated fraction of C by zoo 298 unassn = 0.3 ! non assimilated fraction of C by zoo 299 unassp = 0.3 ! non assimilated fraction of C by zoo 308 unassn = 0.3 ! non assimilated fraction of N by zoo 309 unassp = 0.3 ! non assimilated fraction of P by zoo 310 xsigma = 0.5 ! Predation window size 311 xsigmadel = 1.0 ! Predation window size scaling 300 312 / 301 313 !----------------------------------------------------------------------- 302 314 &nampisfer ! parameters for iron chemistry 303 315 !----------------------------------------------------------------------- 304 ln_ligvar = .false. 305 xlam1 = 0.0 05 ! scavenging rate of Iron306 xlamdust = 150.0 ! Scavenging rate of dust307 ligand = 0.7E-9! Ligands concentration316 ln_ligvar = .false. ! variable ligand concentration 317 xlam1 = 0.02 ! scavenging rate of Iron by biogenic particles 318 xlamdust = 150.0 ! Scavenging rate of Iron by dust 319 ligand = 1E-9 ! Ligands concentration 308 320 kfep = 0.01 ! Nanoparticle formation rate constant 321 scaveff = 1.0 ! Fraction of scavenged Fe that goes to POFe 309 322 / 310 323 !----------------------------------------------------------------------- 311 324 &nampisrem ! parameters for remineralization 312 325 !----------------------------------------------------------------------- 313 xremik = 0.3 ! remineralization rate of DOC314 326 nitrif = 0.05 ! NH4 nitrification rate 315 327 xsirem = 0.003 ! remineralization rate of Si 316 328 xsiremlab = 0.03 ! fast remineralization rate of Si 317 329 xsilab = 0.5 ! Fraction of labile biogenic silica 318 feratb = 10.E-6 ! Fe/C quota in bacteria319 xkferb = 3E-10 ! Half-saturation constant for bacteria Fe/C330 feratb = 60.E-6 ! Fe/C quota in bacteria 331 xkferb = 4E-10 ! Half-saturation constant for bacteria Fe/C 320 332 ! ! ln_p5z 321 xremikc = 0.25 ! remineralization rate of DOC 322 xremikn = 0.35 ! remineralization rate of DON 323 xremikp = 0.4 ! remineralization rate of DOP 324 ! feratb = 20E-6 ! Bacterial Fe/C ratio 325 ! xkferb = 3E-10 ! Half-saturation constant for bact. Fe/C 333 xremikc = 0.4 ! remineralization rate of DOC 334 xremikn = 0.4 ! remineralization rate of DON 335 xremikp = 0.5 ! remineralization rate of DOP 326 336 / 327 337 !----------------------------------------------------------------------- 328 338 &nampispoc ! parameters for organic particles 329 339 !----------------------------------------------------------------------- 330 xremip = 0.035 ! remineralisation rate of PO N340 xremip = 0.035 ! remineralisation rate of POC 331 341 jcpoc = 15 ! Number of lability classes 332 342 rshape = 1.0 ! Shape of the gamma function 333 343 ! ! ln_p5z 334 xremipc = 0.02 335 xremipn = 0.0 25! remineralisation rate of PON336 xremipp = 0.03 344 xremipc = 0.028 ! remineralisation rate of POC 345 xremipn = 0.03 ! remineralisation rate of PON 346 xremipp = 0.035 ! remineralisation rate of POP 337 347 / 338 348 !----------------------------------------------------------------------- 339 349 &nampiscal ! parameters for Calcite chemistry 340 350 !----------------------------------------------------------------------- 341 kdca = 6.! calcite dissolution rate constant (1/time)342 nca = 1.! order of dissolution reaction (dimensionless)351 kdca = 100. ! calcite dissolution rate constant (1/time) 352 nca = 4.7 ! order of dissolution reaction (dimensionless) 343 353 / 344 354 !----------------------------------------------------------------------- … … 358 368 distcoast = 5.e3 ! Distance off the coast for Iron from sediments 359 369 mfrac = 0.035 ! Fe mineral fraction of dust 360 wdust = 2.0 ! Dust sinking speed 370 wdust = 2.0 ! Dust sinking speed 361 371 icefeinput = 15.e-9 ! Iron concentration in sea ice 362 hratio = 1.e+7 ! Fe to 3He ratio assumed for vent iron supply 372 hratio = 1.e+7 ! Fe to 3He ratio assumed for vent iron supply 363 373 ! ! ln_ligand 364 lgw_rath = 0.5 ! Weak ligand ratio from sed hydro sources 365 / 366 !----------------------------------------------------------------------- 367 &nampissed ! parameters for sediments mobilization 368 !----------------------------------------------------------------------- 369 nitrfix = 1.e-7 ! Nitrogen fixation rate 370 diazolight = 50. ! Diazotrophs sensitivity to light (W/m2) 374 lgw_rath = 0.2 ! Weak ligand ratio from sed hydro sources 375 / 376 !----------------------------------------------------------------------- 377 &nampislig ! Namelist parameters for ligands, nampislig 378 !----------------------------------------------------------------------- 379 rlgw = 300. ! Lifetime (years) of weak ligands 380 rlig = 1.E-4 ! Remin ligand production per unit C 381 prlgw = 3.E-4 ! Photolysis of weak ligand 382 rlgs = 1. ! Lifetime (years) of strong ligands 383 xklig = 1.E-9 ! 1/2 saturation constant of photolysis 384 / 385 !----------------------------------------------------------------------- 386 &nampissed ! Namelist parameters for sediment mobilisation 387 !----------------------------------------------------------------------- 388 nitrfix = 2.e-7 ! Nitrogen fixation rate 389 diazolight = 30. ! Diazotrophs sensitivity to light (W/m2) 371 390 concfediaz = 1.e-10 ! Diazotrophs half-saturation Cste for Iron 372 /373 !-----------------------------------------------------------------------374 &nampislig ! Namelist parameters for ligands, nampislig375 !-----------------------------------------------------------------------376 rlgw = 100. ! Lifetime (years) of weak ligands377 rlig = 1.E-4 ! Remin ligand production per unit C378 prlgw = 1.E-4 ! Photolysis of weak ligand379 rlgs = 1. ! Lifetime (years) of strong ligands380 391 / 381 392 !----------------------------------------------------------------------- -
NEMO/branches/2021/dev_r14318_RK3_stage1/cfgs/SHARED/namelist_ref
r14255 r15574 26 26 !! namtsd data: temperature & salinity (default: OFF) 27 27 !! namcrs coarsened grid (for outputs and/or TOP) (ln_crs =T) 28 !! namc1d 1D configuration options ( "key_c1d")29 !! namc1d_dyndmp 1D newtonian damping applied on currents ( "key_c1d")30 !! namc1d_uvd 1D data (currents) ( "key_c1d")28 !! namc1d 1D configuration options (ln_c1d =T) 29 !! namc1d_dyndmp 1D newtonian damping applied on currents (ln_c1d =T) 30 !! namc1d_uvd 1D data (currents) (ln_c1d =T) 31 31 !!====================================================================== 32 32 ! … … 76 76 ! 77 77 ln_crs = .false. ! Logical switch for coarsening module (T => fill namcrs) 78 ln_c1d = .false. ! Single column domain (1x1pt) (T => fill namc1d) 78 79 ! 79 80 ln_meshmask = .true. ! =T create a mesh file … … 99 100 !----------------------------------------------------------------------- 100 101 ln_tile = .false. ! Use tiling (T) or not (F) 101 nn_ltile_i = 10! Length of tiles in i102 nn_ltile_i = 99999 ! Length of tiles in i 102 103 nn_ltile_j = 10 ! Length of tiles in j 103 104 / … … 161 162 / 162 163 !----------------------------------------------------------------------- 163 &namc1d ! 1D configuration options ("key_c1d" default: PAPA station) 164 !----------------------------------------------------------------------- 165 rn_lat1d = 50 ! Column latitude 166 rn_lon1d = -145 ! Column longitude 167 ln_c1d_locpt = .true. ! Localization of 1D config in a grid (T) or independant point (F) 168 / 169 !----------------------------------------------------------------------- 170 &namc1d_dyndmp ! U & V newtonian damping ("key_c1d" default: OFF) 164 &namc1d ! 1D configuration options (ln_c1d =T default: PAPA station) 165 !----------------------------------------------------------------------- 166 rn_lat1d = 50.1 ! Column latitude 167 rn_lon1d = -144.9 ! Column longitude 168 / 169 !----------------------------------------------------------------------- 170 &namc1d_dyndmp ! U & V newtonian damping (ln_c1d =T default: OFF) 171 171 !----------------------------------------------------------------------- 172 172 ln_dyndmp = .false. ! add a damping term (T) or not (F) 173 173 / 174 174 !----------------------------------------------------------------------- 175 &namc1d_uvd ! data: U & V currents ( "key_c1d"default: OFF)175 &namc1d_uvd ! data: U & V currents (ln_c1d =T default: OFF) 176 176 !----------------------------------------------------------------------- 177 177 ! ! =T read U-V fields for: … … 531 531 ln_isfcav_mlt = .false. ! ice shelf melting into the cavity (need ln_isfcav = .true. in domain_cfg.nc) 532 532 cn_isfcav_mlt = '3eq' ! ice shelf melting formulation (spe/2eq/3eq/oasis) 533 ! ! spe = fwfisf is read from a forcing field 533 ! ! spe = fwfisf is read from a forcing field ( melt > 0; freezing < 0 ) 534 534 ! ! 2eq = ISOMIP like: 2 equations formulation (Hunter et al., 2006 for a short description) 535 535 ! ! 3eq = ISOMIP+ like: 3 equations formulation (Asay-Davis et al., 2016 for a short description) … … 556 556 ln_isfpar_mlt = .false. ! ice shelf melting parametrised 557 557 cn_isfpar_mlt = 'spe' ! ice shelf melting parametrisation (spe/bg03/oasis) 558 ! ! spe = fwfisf is read from a forcing field 558 ! ! spe = fwfisf is read from a forcing field ( melt > 0; freezing < 0 ) 559 559 ! ! bg03 = melt computed using Beckmann and Goosse parametrisation 560 560 ! ! oasis = fwfisf is given by oasis and pattern by file sn_isfpar_fwf 561 ! 562 !* bg03 case 563 rn_isfpar_bg03_gt0 = 1.0e-4 ! gamma coeficient used in bg03 paper [m/s] 564 ! 565 !*** File definition *** 561 566 ! 562 567 !* all cases … … 566 571 sn_isfpar_zmax = 'isfmlt_par', 0. ,'sozisfmax', .false. , .true. , 'yearly' , '' , '' , '' 567 572 sn_isfpar_zmin = 'isfmlt_par', 0. ,'sozisfmin', .false. , .true. , 'yearly' , '' , '' , '' 573 ! 568 574 !* 'spe' and 'oasis' case 569 575 sn_isfpar_fwf = 'isfmlt_par' , -12. ,'sofwfisf' , .false. , .true. , 'yearly' , '' , '' , '' 576 ! 570 577 !* 'bg03' case 578 !* Leff is in [km] 571 579 sn_isfpar_Leff = 'isfmlt_par', 0. ,'Leff' , .false. , .true. , 'yearly' , '' , '' , '' 572 580 ! … … 644 652 rn_test_box = 108.0, 116.0, -66.0, -58.0 645 653 ln_use_calving = .false. ! Use calving data even when nn_test_icebergs > 0 646 rn_speed_limit = 0. ! CFL speed limit for a berg 654 rn_speed_limit = 0. ! CFL speed limit for a berg (safe value is 0.4, see #2581) 647 655 ! 648 656 ln_M2016 = .false. ! use Merino et al. (2016) modification (use of 3d ocean data instead of only sea surface data) … … 686 694 ln_vert_remap = .false. ! use vertical remapping 687 695 ln_spc_dyn = .true. ! use 0 as special value for dynamics 688 ln_chk_bathy = . false.! =T check the parent bathymetry696 ln_chk_bathy = .true. ! =T check the parent bathymetry 689 697 rn_sponge_tra = 0.002 ! coefficient for tracer sponge layer [] 690 698 rn_sponge_dyn = 0.002 ! coefficient for dynamics sponge layer [] … … 1234 1242 ! ! = 2 roughness uses rn_hsri and is weighted by 1-fr_i 1235 1243 ! ! = 3 roughness uses rn_hsri and is weighted by 1-MIN(1,4*fr_i) 1244 nn_mxlice = 1 ! mixing under sea ice 1245 ! = 0 No scaling under sea-ice 1246 ! = 1 scaling with constant Ice-ocean roughness (rn_hsri) 1247 ! = 2 scaling with mean sea-ice thickness 1248 ! = 3 scaling with max sea-ice thickness 1236 1249 nn_bc_surf = 1 ! surface condition (0/1=Dir/Neum) 1237 1250 nn_bc_bot = 1 ! bottom condition (0/1=Dir/Neum) … … 1265 1278 ! = 2:use surface value of SD fit to slope at rn_osm_hblfrac*hbl below surface 1266 1279 ln_zdfosm_ice_shelter = .true. ! reduce surface SD and depth scale under ice 1267 ln_osm_mle = . false.! Use integrated FK-OSM model1280 ln_osm_mle = .true. ! Use integrated FK-OSM model 1268 1281 / 1269 1282 !----------------------------------------------------------------------- … … 1273 1286 nn_osm_mle = 0 ! MLE type: =0 standard Fox-Kemper ; =1 new formulation 1274 1287 rn_osm_mle_lf = 5.e+3 ! typical scale of mixed layer front (meters) (case rn_osm_mle=0) 1275 rn_osm_mle_time = 172800.! time scale for mixing momentum across the mixed layer (seconds) (case rn_osm_mle=0)1288 rn_osm_mle_time = 43200. ! time scale for mixing momentum across the mixed layer (seconds) (case rn_osm_mle=0) 1276 1289 rn_osm_mle_lat = 20. ! reference latitude (degrees) of MLE coef. (case rn_mle=1) 1277 rn_osm_mle_rho_c = 0.01! delta rho criterion used to calculate MLD for FK1278 rn_osm_mle_thresh = 0.0005! delta b criterion used for FK MLE criterion1279 rn_osm_mle_tau = 172800.! time scale for FK-OSM (seconds) (case rn_osm_mle=0)1280 ln_osm_hmle_limit = . false. !limit hmle to rn_osm_hmle_limit*hbl1281 rn_osm_hmle_limit = 1. 21290 rn_osm_mle_rho_c = 0.03 ! delta rho criterion used to calculate MLD for FK 1291 rn_osm_mle_thresh = 0.0001 ! delta b criterion used for FK MLE criterion 1292 rn_osm_mle_tau = 172800. ! time scale for FK-OSM (seconds) (case rn_osm_mle=0) 1293 ln_osm_hmle_limit = .true. ! If true, limit hmle to rn_osm_hmle_limit*hbl 1294 rn_osm_hmle_limit = 1.5 1282 1295 / 1283 1296 !----------------------------------------------------------------------- … … 1498 1511 jpnj = 0 ! number of processors following j (set automatically if < 1), see also ln_listonly = T 1499 1512 nn_hls = 1 ! halo width (applies to both rows and columns) 1513 nn_comm = 1 ! comm choice 1500 1514 / 1501 1515 !----------------------------------------------------------------------- -
NEMO/branches/2021/dev_r14318_RK3_stage1/cfgs/SHARED/namelist_top_ref
r14032 r15574 101 101 / 102 102 !----------------------------------------------------------------------- 103 &namtrc_opt ! light availability in the water column 104 !----------------------------------------------------------------------- 105 ! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask ! 106 ! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename ! 107 sn_par = 'par.orca' , 24 , 'fr_par' , .true. , .true. , 'yearly' , '' , '' , '' 108 cn_dir = './' ! root directory for the location of the dynamical files 109 ln_varpar = .true. ! Read PAR from file 110 parlux = 0.43 ! Fraction of shortwave as PAR 111 light_loc = 'center' ! Light location in the water cell ('center', 'integral') 112 / 113 !----------------------------------------------------------------------- 103 114 &namtrc_dmp ! passive tracer newtonian damping (ln_trcdmp=T) 104 115 !-----------------------------------------------------------------------
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