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Changeset 15811 – NEMO

Changeset 15811


Ignore:
Timestamp:
2022-10-07T11:53:16+02:00 (19 months ago)
Author:
clem
Message:

debug field_def for pisces

Location:
NEMO/releases/r4.0/r4.0-HEAD/cfgs/SHARED
Files:
2 edited

Legend:

Unmodified
Added
Removed
  • NEMO/releases/r4.0/r4.0-HEAD/cfgs/SHARED/field_def_nemo-pisces.xml

    r14208 r15811  
    9999       <field id="PFe"          long_name="Picophytoplankton Fe biomass"             unit="mmol/m3" /> 
    100100       <field id="PFe_e3t"      long_name="PFe * e3t"                                unit="mmol/m2"  > PFe * e3t </field > 
    101        <field id="PCHL"         long_name="Picophytoplankton Chl biomass"            unit="mg/m3" /> 
     101       <field id="PCHL"         long_name="Picophytoplankton Chl biomass"            unit="mg/m3"   /> 
    102102       <field id="PCHL_e3t"     long_name="PCHL * e3t"                               unit="mmol/m2"  > PCHL * e3t </field > 
    103103 
     
    234234       <field id="AtmCo2"      long_name="Atmospheric CO2 concentration"           unit="ppm"                               /> 
    235235       <field id="Irondep"     long_name="Iron deposition from dust"               unit="mol/m2/s"                        /> 
    236        <field id="Ironsed"     long_name="Iron deposition from sediment"           unit="mol/m2/s"   grid_ref="grid_T_3D" /> 
    237        <field id="FESCAV"      long_name="Scavenging of Iron"                      unit="mmol-Fe/m3/s"   grid_ref="grid_T_3D" /> 
    238        <field id="FECOLL"      long_name="Colloidal Pumping of FeL"                unit="mmol-FeL/m3/s"  grid_ref="grid_T_3D" /> 
    239        <field id="LGWCOLL"     long_name="Coagulation loss of ligands"             unit="mmol-L/m3/s"  grid_ref="grid_T_3D" /> 
    240        <field id="REMINF"      long_name="Oxic remineralization suppy of Fe"       unit="mmol-Fe/m3/s"  grid_ref="grid_T_3D" /> 
    241        <field id="BACT"        long_name="Bacterial Biomass"                       unit="mmol/m3"  grid_ref="grid_T_3D" /> 
    242        <field id="FEBACT"      long_name="Bacterial uptake of Fe"                  unit="molFe/m3/s"  grid_ref="grid_T_3D" /> 
    243        <field id="LPRODR"      long_name="OM remineralisation ligand production rate" unit="nmol-L/m3/s"  grid_ref="grid_T_3D" /> 
    244        <field id="LPRODP"      long_name="phytoplankton ligand production rate"    unit="nmol-L/m3/s"  grid_ref="grid_T_3D" /> 
    245        <field id="LIGREM"      long_name="Remineralisation loss of ligands"        unit="nmol-L/m3/s"  grid_ref="grid_T_3D" /> 
    246        <field id="LIGPR"       long_name="Photochemical loss of ligands"           unit="nmol-L/m3/s"  grid_ref="grid_T_3D" /> 
     236       <field id="Ironsed"     long_name="Iron deposition from sediment"           unit="mol/m2/s"            grid_ref="grid_T_3D" /> 
     237       <field id="FESCAV"      long_name="Scavenging of Iron"                      unit="mmol-Fe/m3/s"        grid_ref="grid_T_3D" /> 
     238       <field id="FECOLL"      long_name="Colloidal Pumping of FeL"                unit="mmol-FeL/m3/s"       grid_ref="grid_T_3D" /> 
     239       <field id="LGWCOLL"     long_name="Coagulation loss of ligands"             unit="mmol-L/m3/s"         grid_ref="grid_T_3D" /> 
     240       <field id="REMINF"      long_name="Oxic remineralization suppy of Fe"       unit="mmol-Fe/m3/s"        grid_ref="grid_T_3D" /> 
     241       <field id="BACT"        long_name="Bacterial Biomass"                       unit="mmol/m3"             grid_ref="grid_T_3D" /> 
     242       <field id="FEBACT"      long_name="Bacterial uptake of Fe"                  unit="molFe/m3/s"          grid_ref="grid_T_3D" /> 
     243       <field id="LPRODR"      long_name="OM remineralisation ligand production rate" unit="nmol-L/m3/s"      grid_ref="grid_T_3D" /> 
     244       <field id="LPRODP"      long_name="phytoplankton ligand production rate"    unit="nmol-L/m3/s"         grid_ref="grid_T_3D" /> 
     245       <field id="LIGREM"      long_name="Remineralisation loss of ligands"        unit="nmol-L/m3/s"         grid_ref="grid_T_3D" /> 
     246       <field id="LIGPR"       long_name="Photochemical loss of ligands"           unit="nmol-L/m3/s"         grid_ref="grid_T_3D" /> 
    247247       <field id="LDETP"       long_name="Ligand destruction during phytoplankton uptake" unit="nmol-L/m3/s"  grid_ref="grid_T_3D" /> 
    248        <field id="LPRODZ2"     long_name="mesozooplankton ligand production rate"  unit="nmol-L/m3/s"  grid_ref="grid_T_3D" /> 
    249        <field id="LPRODZ"      long_name="microzooplankton ligand production rate" unit="nmol-L/m3/s"  grid_ref="grid_T_3D" /> 
    250        <field id="FEZOO"       long_name="microzooplankton iron recycling rate"    unit="nmol-FeL/m3/s"  grid_ref="grid_T_3D" /> 
    251        <field id="FEZOO2"      long_name="mesozooplankton iron recycling rate"     unit="nmol-FeL/m3/s"  grid_ref="grid_T_3D" /> 
     248       <field id="LPRODZ2"     long_name="mesozooplankton ligand production rate"  unit="nmol-L/m3/s"         grid_ref="grid_T_3D" /> 
     249       <field id="LPRODZ"      long_name="microzooplankton ligand production rate" unit="nmol-L/m3/s"         grid_ref="grid_T_3D" /> 
     250       <field id="FEZOO"       long_name="microzooplankton iron recycling rate"    unit="nmol-FeL/m3/s"       grid_ref="grid_T_3D" /> 
     251       <field id="FEZOO2"      long_name="mesozooplankton iron recycling rate"     unit="nmol-FeL/m3/s"       grid_ref="grid_T_3D" /> 
    252252 
    253253       <!-- PISCES tracers trends --> 
     
    261261 
    262262       <!-- dbio_T on T grid : variables available with diaar5 --> 
    263        <!-- dbio_T on T grid : variables available with diaar5 --> 
    264263       <field id="TPP"         long_name="Total Primary production of phyto"                   unit="mol/m3/s"  grid_ref="grid_T_3D" /> 
    265264       <field id="TPNEW"       long_name="New Primary production of phyto"                     unit="mol/m3/s"  grid_ref="grid_T_3D" /> 
     
    269268       <field id="ZO2MIN"      long_name="Depth of oxygen minimum concentration"               unit="m"                              /> 
    270269 
    271        <field id="INTNFIX"     long_name="Nitrogen fixation rate : vert. integrated"           unit="mol/m2/s"  grid_ref="grid_T_vsum"  detect_missing_value="true" > Nfix * e3t </field > 
    272        <field id="INTPPPHYN"   long_name="Vertically integrated primary production by nanophy" unit="mol/m2/s"  grid_ref="grid_T_vsum"  detect_missing_value="true" > PPPHYN * e3t </field > 
    273        <field id="INTPPPHYD"   long_name="Vertically integrated primary production by diatom"  unit="mol/m2/s"  grid_ref="grid_T_vsum"  detect_missing_value="true" > PPPHYD * e3t </field > 
    274        <field id="INTPPPHYP"   long_name="Vertically integrated primary production by picophy" unit="mol/m2/s"  grid_ref="grid_T_vsum"  detect_missing_value="true" > PPPHYP * e3t </field > 
    275        <field id="INTPP"       long_name="Vertically integrated primary production by phyto"   unit="mol/m2/s"  grid_ref="grid_T_vsum"  detect_missing_value="true" > TPP * e3t </field > 
    276        <field id="INTPNEW"     long_name="Vertically integrated new primary production"        unit="mol/m2/s"  grid_ref="grid_T_vsum"  detect_missing_value="true" > TPNEW * e3t </field > 
    277        <field id="INTPBFE"     long_name="Vertically integrated of biogenic iron production"   unit="mol/m2/s"  grid_ref="grid_T_vsum"  detect_missing_value="true" > TPBFE * e3t </field > 
    278        <field id="INTPBSI"     long_name="Vertically integrated of biogenic Si production"     unit="mol/m2/s"  grid_ref="grid_T_vsum"  detect_missing_value="true" > PBSi * e3t </field > 
     270 
     271       <field id="Nfix_e3t"    long_name="Nfix * e3t"        unit="molN/m2/s" grid_ref="grid_T_3D"  > Nfix   * e3t </field >   
     272       <field id="PPPHYN_e3t"  long_name="PPPHYN * e3t"      unit="mol/m2/s"  grid_ref="grid_T_3D"  > PPPHYN * e3t </field >   
     273       <field id="PPPHYD_e3t"  long_name="PPPHYD * e3t"      unit="mol/m2/s"  grid_ref="grid_T_3D"  > PPPHYD * e3t </field >   
     274       <field id="PPPHYP_e3t"  long_name="PPPHYP * e3t"      unit="mol/m2/s"  grid_ref="grid_T_3D"  > PPPHYP * e3t </field >   
     275       <field id="PBSi_e3t"    long_name="PBSi * e3t"        unit="mol/m2/s"  grid_ref="grid_T_3D"  > PBSi   * e3t </field >   
     276       <field id="TPP_e3t"     long_name="TPP * e3t"         unit="mol/m2/s"  grid_ref="grid_T_3D"  > TPP    * e3t </field >   
     277       <field id="TPNEW_e3t"   long_name="TPNEW * e3t"       unit="mol/m2/s"  grid_ref="grid_T_3D"  > TPNEW  * e3t </field >   
     278       <field id="TPBFE_e3t"   long_name="TPBFE * e3t"       unit="mol/m2/s"  grid_ref="grid_T_3D"  > TPBFE  * e3t </field >   
     279 
     280       <field id="INTNFIX"     long_name="Nitrogen fixation rate : vert. integrated"           field_ref="Nfix_e3t"     unit="mol/m2/s"  grid_ref="grid_T_vsum"  detect_missing_value="true" /> 
     281       <field id="INTPPPHYN"   long_name="Vertically integrated primary production by nanophy" field_ref="PPPHYN_e3t"   unit="mol/m2/s"  grid_ref="grid_T_vsum"  detect_missing_value="true" /> 
     282       <field id="INTPPPHYD"   long_name="Vertically integrated primary production by diatom"  field_ref="PPPHYD_e3t"   unit="mol/m2/s"  grid_ref="grid_T_vsum"  detect_missing_value="true" /> 
     283       <field id="INTPPPHYP"   long_name="Vertically integrated primary production by picophy" field_ref="PPPHYP_e3t"   unit="mol/m2/s"  grid_ref="grid_T_vsum"  detect_missing_value="true" /> 
     284       <field id="INTPP"       long_name="Vertically integrated primary production by phyto"   field_ref="TPP_e3t"      unit="mol/m2/s"  grid_ref="grid_T_vsum"  detect_missing_value="true" /> 
     285       <field id="INTPNEW"     long_name="Vertically integrated new primary production"        field_ref="TPNEW_e3t"    unit="mol/m2/s"  grid_ref="grid_T_vsum"  detect_missing_value="true" /> 
     286       <field id="INTPBFE"     long_name="Vertically integrated of biogenic iron production"   field_ref="TPBFE_e3t"    unit="mol/m2/s"  grid_ref="grid_T_vsum"  detect_missing_value="true" /> 
     287       <field id="INTPBSI"     long_name="Vertically integrated of biogenic Si production"     field_ref="PBSi_e3t"     unit="mol/m2/s"  grid_ref="grid_T_vsum"  detect_missing_value="true" /> 
    279288 
    280289       <!-- PISCES light : variables available with key_pisces_reduced --> 
    281        <field id="FNO3PHY"     long_name="FNO3PHY"                                 unit=""          grid_ref="grid_T_3D" />  
    282        <field id="FNH4PHY"     long_name="FNH4PHY"                                 unit=""          grid_ref="grid_T_3D" />  
    283        <field id="FNH4NO3"     long_name="FNH4NO3"                                 unit=""          grid_ref="grid_T_3D" />  
     290       <field id="FNO3PHY"     long_name="FNO3PHY"                                 unit=""    grid_ref="grid_T_3D" />  
     291       <field id="FNH4PHY"     long_name="FNH4PHY"                                 unit=""    grid_ref="grid_T_3D" />  
     292       <field id="FNH4NO3"     long_name="FNH4NO3"                                 unit=""    grid_ref="grid_T_3D" />  
    284293       <field id="TNO3PHY"     long_name="TNO3PHY"                                 unit=""  />  
    285294       <field id="TNH4PHY"     long_name="TNH4PHY"                                 unit=""  />  
  • NEMO/releases/r4.0/r4.0-HEAD/cfgs/SHARED/namelist_ref

    r15610 r15811  
    248248   sn_qsr      = 'qsr'                   ,        24.        , 'qsr'     , .false.     , .false., 'yearly'  , ''               , ''       , '' 
    249249   sn_emp      = 'emp'                   ,        24.        , 'emp'     , .false.     , .false., 'yearly'  , ''               , ''       , '' 
     250   !!sn_sfx    = 'sfx'                   ,        24.        , 'sfx'     , .false.     , .false., 'yearly'  , ''               , ''       , '' 
     251   ! read sea ice thickness to determine mixing intensity under sea ice 
     252   !!sn_sithic = 'ice'                   ,       -1          , 'sithic'  , .true.      , .false., 'yearly'  , ''               , ''       , '' 
     253   !!sn_siconc = 'ice'                   ,       -1          , 'siconc'  , .true.      , .false., 'yearly'  , ''               , ''       , '' 
    250254/ 
    251255!----------------------------------------------------------------------- 
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