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Changeset 4219 for branches/2013/dev_r3948_NOC_FK/NEMOGCM/TOOLS – NEMO

Ignore:
Timestamp:
2013-11-15T16:25:37+01:00 (11 years ago)
Author:
acc
Message:

Branch dev_r3948_NOC_FK. Ready for merge; now includes trunk changes up to revision 4119 and has been SETTE tested. SETTE scripts now include options for testing in detached mode.

Location:
branches/2013/dev_r3948_NOC_FK/NEMOGCM/TOOLS
Files:
3 edited

Legend:

Unmodified
Added
Removed

  • branches/2013/dev_r3948_NOC_FK/NEMOGCM/TOOLS/COMPILE/Fcheck_archfile.sh

    r3925 r4219  
    4040# :: 
    4141# 
    42 #  $ ./Fcheck_archfile.sh ARCHFILE COMPILER 
     42#  $ ./Fcheck_archfile.sh ARCHFILE CPPFILE COMPILER 
    4343# 
    4444# 
    … …  
    9494   else 
    9595       if [ -f ${COMPIL_DIR}/$1 ]; then 
    96       # has the cpp keys file been changed since we copied the arch file in ${COMPIL_DIR}? 
    97       mycpp=$( ls -l ${COMPIL_DIR}/$2 | sed -e "s/.* -> //" ) 
    98       if [ "$mycpp" != "$( cat ${COMPIL_DIR}/cpp.history )" ]; then 
    99           echo $mycpp > ${COMPIL_DIR}/cpp.history 
    100           cpeval ${myarch} ${COMPIL_DIR}/$1 
     96      if [ "$2" != "nocpp" ]  
     97      then 
     98          # has the cpp keys file been changed since we copied the arch file in ${COMPIL_DIR}? 
     99          mycpp=$( ls -l ${COMPIL_DIR}/$2 | sed -e "s/.* -> //" ) 
     100          if [ "$mycpp" != "$( cat ${COMPIL_DIR}/cpp.history )" ]; then 
     101         echo $mycpp > ${COMPIL_DIR}/cpp.history 
     102         cpeval ${myarch} ${COMPIL_DIR}/$1 
     103          fi 
     104          # has the cpp keys file been updated since we copied the arch file in ${COMPIL_DIR}? 
     105          mycpp=$( find -L ${COMPIL_DIR} -cnewer ${COMPIL_DIR}/$1 -name $2 -print ) 
     106          [ ${#mycpp} -ne 0 ] && cpeval ${myarch} ${COMPIL_DIR}/$1 
    101107      fi 
    102       # has the cpp keys file been updated since we copied the arch file in ${COMPIL_DIR}? 
    103       mycpp=$( find -L ${COMPIL_DIR} -cnewer ${COMPIL_DIR}/$1 -name $2 -print ) 
    104       [ ${#mycpp} -ne 0 ] && cpeval ${myarch} ${COMPIL_DIR}/$1 
    105108      # has myarch file been updated since we copied it in ${COMPIL_DIR}? 
    106109      myarchdir=$( dirname ${myarch} ) 
    … …  
    134137    if [ "$myarch" == "$( cat ${COMPIL_DIR}/arch.history )" ]; then  
    135138   if [ -f ${COMPIL_DIR}/$1 ]; then 
    136        # has the cpp keys file been changed since we copied the arch file in ${COMPIL_DIR}? 
    137        mycpp=$( ls -l ${COMPIL_DIR}/$2 | sed -e "s/.* -> //" ) 
    138        if [ "$mycpp" != "$( cat ${COMPIL_DIR}/cpp.history )" ]; then 
    139       echo $mycpp > ${COMPIL_DIR}/cpp.history 
    140       cpeval ${myarch} ${COMPIL_DIR}/$1 
     139       if [ "$2" != "nocpp" ]  
     140       then 
     141      # has the cpp keys file been changed since we copied the arch file in ${COMPIL_DIR}? 
     142      mycpp=$( ls -l ${COMPIL_DIR}/$2 | sed -e "s/.* -> //" ) 
     143      if [ "$mycpp" != "$( cat ${COMPIL_DIR}/cpp.history )" ]; then 
     144          echo $mycpp > ${COMPIL_DIR}/cpp.history 
     145          cpeval ${myarch} ${COMPIL_DIR}/$1 
     146      fi 
     147      # has the cpp keys file been updated since we copied the arch file in ${COMPIL_DIR}? 
     148      mycpp=$( find -L ${COMPIL_DIR} -cnewer ${COMPIL_DIR}/$1 -name $2 -print ) 
     149      [ ${#mycpp} -ne 0 ] && cpeval ${myarch} ${COMPIL_DIR}/$1 
    141150       fi 
    142        # has the cpp keys file been updated since we copied the arch file in ${COMPIL_DIR}? 
    143        mycpp=$( find -L ${COMPIL_DIR} -cnewer ${COMPIL_DIR}/$1 -name $2 -print ) 
    144        [ ${#mycpp} -ne 0 ] && cpeval ${myarch} ${COMPIL_DIR}/$1 
    145151       # has myarch file been updated since we copied it in ${COMPIL_DIR}? 
    146152       myarch=$( find -L ${MAIN_DIR}/ARCH -cnewer ${COMPIL_DIR}/$1 -name arch-${3}.fcm -print ) 
    … …  
    150156   fi 
    151157    else 
    152    ls -l ${COMPIL_DIR}/$2 | sed -e "s/.* -> //" > ${COMPIL_DIR}/cpp.history 
     158   if [ "$2" != "nocpp" ]  
     159   then 
     160       ls -l ${COMPIL_DIR}/$2 | sed -e "s/.* -> //" > ${COMPIL_DIR}/cpp.history 
     161   fi 
    153162   echo ${myarch} > ${COMPIL_DIR}/arch.history 
    154163   cpeval ${myarch} ${COMPIL_DIR}/$1 
    … …  
    157166 
    158167#- do we need xios library? 
    159 use_iom=$( sed -e "s/#.*$//" ${COMPIL_DIR}/$2 | grep -c key_iomput ) 
     168if [ "$2" != "nocpp" ]  
     169then 
     170    use_iom=$( sed -e "s/#.*$//" ${COMPIL_DIR}/$2 | grep -c key_iomput ) 
     171else 
     172    use_iom=0 
     173fi 
    160174have_lxios=$( sed -e "s/#.*$//" ${COMPIL_DIR}/$1 | grep -c "\-lxios" ) 
    161175if [[ ( $use_iom -eq 0 ) && ( $have_lxios -ge 1 ) ]] 
    … …  
    166180 
    167181#- do we need oasis libraries? 
    168 use_oasis=$( sed -e "s/#.*$//" ${COMPIL_DIR}/$2 | grep -c key_oasis3 ) 
     182if [ "$2" != "nocpp" ]  
     183then 
     184    use_oasis=$( sed -e "s/#.*$//" ${COMPIL_DIR}/$2 | grep -c key_oasis3 ) 
     185else 
     186    use_oasis=0 
     187fi 
    169188for liboa in psmile.MPI1 mct mpeu scrip mpp_io 
    170189do 

  • branches/2013/dev_r3948_NOC_FK/NEMOGCM/TOOLS/MISCELLANEOUS/chk_iomput.sh

    r2404 r4219  
    3535       echo ' --insrc              only print all variable definitions found in the source code' 
    3636       echo 'Examples' 
    37        echo '      chk_iomput.sh' 
    38        echo '      chk_iomput.sh --help' 
    39        echo '      chk_iomput.sh ../../CONFIG/ORCA2_LIM/EXP00/iodef.xml "../../NEMO/OPA_SRC/ ../../NEMO/LIM_SRC_2/"' 
     37       echo '      ./chk_iomput.sh' 
     38       echo '      ./chk_iomput.sh --help' 
     39       echo '      ./chk_iomput.sh ../../CONFIG/ORCA2_LIM/EXP00/iodef.xml "../../NEMO/OPA_SRC/ ../../NEMO/LIM_SRC_2/"' 
    4040       echo 
    4141       exit ;; 
    … …  
    5959#------------------------------------------------ 
    6060# 
    61 [ $inxml -eq 1 ] && grep "< *field * id *=" $xmlfile 
     61external=$( grep -c "<field_definition  *\([^ ].* \)*src=" $xmlfile ) 
     62if [ $external -eq 1 ] 
     63then 
     64    xmlfield_def=$( grep "<field_definition  *\([^ ].* \)*src=" $xmlfile | sed -e 's/.*src="\([^"]*\)".*/\1/' ) 
     65    xmlfield_def=$( dirname $xmlfile )/$xmlfield_def    
     66else 
     67    xmlfield_def=$xmlfile 
     68fi 
     69[ $inxml -eq 1 ] && grep "< *field  *\([^ ].* \)*id *=" $xmlfield_def 
    6270[ $insrc -eq 1 ] && find $srcdir -name "*.[Ffh]90" -exec grep -iH "^[^\!]*call  *iom_put *(" {} \; 
    6371[ $(( $insrc + $inxml )) -ge 1 ] && exit 
    … …  
    7179# list of variables used in "CALL iom_put" 
    7280# 
    73 varlistsrc=$( find $srcdir -name "*.[Ffh]90" -exec grep -i  "^[^\!]*call  *iom_put *(" {} \; | sed -e "s/.*iom_put *( *[\"\']\([^\"\']*\)[\"\'] *,.*/\1/" | sort -d ) 
     81badvarsrc=$( find $srcdir -name "*.[Ffh]90" -exec grep -i  "^[^\!]*call  *iom_put *(" {} \; | sed -e "s/.*iom_put *( *[\"\']\([^\"\']*\)[\"\'] *,.*/\1/" | grep -ic iom_put ) 
     82if [ $badvarsrc -ne 0 ] 
     83then 
     84    echo "The following call to iom_put cannot be checked" 
     85    echo 
     86    find $srcdir -name "*.[Ffh]90" -exec grep -i  "^[^\!]*call  *iom_put *(" {} \; | sed -e "s/.*iom_put *( *[\"\']\([^\"\']*\)[\"\'] *,.*/\1/" | grep -i iom_put | sort -d  
     87    echo 
     88fi 
     89varlistsrc=$( find $srcdir -name "*.[Ffh]90" -exec grep -i  "^[^\!]*call  *iom_put *(" {} \; | sed -e "s/.*iom_put *( *[\"\']\([^\"\']*\)[\"\'] *,.*/\1/" | grep -vi iom_put | sort -d ) 
    7490# 
    7591# list of variables defined in the xml file 
    7692# 
    77 varlistxml=$( grep "< *field * id *=" $xmlfile  | sed -e "s/^.*< *field * id *= *[\"\']\([^\"\']*\)[\"\'].*/\1/" | sort -d ) 
     93varlistxml=$( grep "< *field  *\([^ ].* \)*id *=" $xmlfield_def  | sed -e "s/^.*< *field .*id *= *[\"\']\([^\"\']*\)[\"\'].*/\1/" | sort -d ) 
    7894# 
    7995# list of variables to be outputed in the xml file 
    8096# 
    81 varlistout=$( grep "< *field * ref *=" $xmlfile  | sed -e "s/^.*< *field * ref *= *[\"\']\([^\"\']*\)[\"\'].*/\1/" | sort -d ) 
     97varlistout=$( grep "< *field  *\([^ ].* \)*field_ref *=" $xmlfile  | sed -e "s/^.*< *field .*field_ref *= *[\"\']\([^\"\']*\)[\"\'].*/\1/" | sort -d ) 
    8298# 
    8399echo "--------------------------------------------------" 
    84100echo  check if all iom_put found in $srcdir 
    85 echo  have a corresponding variable definition in $xmlfile 
     101echo  have a corresponding variable definition in $xmlfield_def 
    86102echo "--------------------------------------------------" 
    87103for var in $varlistsrc 
    … …  
    90106    if [ $tst -ne 1 ]  
    91107    then 
    92    echo "problem with $var: $tst lines corresponding to its definition in $xmlfile, but defined in the code in" 
     108   echo "problem with $var: $tst lines corresponding to its definition in $xmlfield_def, but defined in the code in" 
    93109   for f in $srclist 
    94110   do 

  • branches/2013/dev_r3948_NOC_FK/NEMOGCM/TOOLS/maketools

    r3294 r4219  
    146146 
    147147#- When used for the first time, choose a compiler --- 
    148 . ${COMPIL_DIR}/Fcheck_archfile.sh arch_tools.fcm ${CMP_NAM} || exit 
     148. ${COMPIL_DIR}/Fcheck_archfile.sh arch_tools.fcm nocpp ${CMP_NAM} || exit 
    149149 
    150150#- Choose a default tool if needed --- 
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