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Changeset 6270 for branches/UKMO/dev_r5518_Surge_Modelling – NEMO

Ignore:
Timestamp:
2016-01-22T17:32:05+01:00 (8 years ago)
Author:
rfurner
Message:

updates to XIOS files for outputting

Location:
branches/UKMO/dev_r5518_Surge_Modelling/NEMOGCM/CONFIG/AMM7_SURGE/EXP00
Files:
2 edited

Legend:

Unmodified
Added
Removed
  • branches/UKMO/dev_r5518_Surge_Modelling/NEMOGCM/CONFIG/AMM7_SURGE/EXP00/field_def.xml

    r6269 r6270  
    2121      <!-- T grid --> 
    2222       
    23       <field_group id="grid_T" grid_ref="grid_T_2D" > 
     23      <field_group id="grid_T" grid_ref="grid_T_2D" operation="instant"> 
    2424         <field id="e3t"          long_name="T-cell thickness"   standard_name="cell_thickness"   unit="m"   grid_ref="grid_T_3D"/> 
    2525 
     
    172172      <!-- SBC --> 
    173173       
    174       <field_group id="SBC" grid_ref="grid_T_2D" > <!-- time step automaticaly defined based on nn_fsbc --> 
     174      <field_group id="SBC" grid_ref="grid_T_2D operation="instant"" > <!-- time step automaticaly defined based on nn_fsbc --> 
    175175         <field id="empmr"        long_name="Net Upward Water Flux"                standard_name="water_flux_out_of_sea_ice_and_sea_water"                              unit="kg/m2/s"   /> 
    176176         <field id="saltflx"      long_name="Downward salt flux"                                                                                                        unit="1e-3/m2/s" /> 
     
    363363      <!-- U grid --> 
    364364       
    365       <field_group id="grid_U"   grid_ref="grid_U_2D"> 
     365      <field_group id="grid_U"   grid_ref="grid_U_2D" operation="instant"> 
    366366         <field id="e3u"          long_name="U-cell thickness"                                       standard_name="cell_thickness"              unit="m"          grid_ref="grid_U_3D" /> 
    367367         <field id="utau"         long_name="Wind Stress along i-axis"                               standard_name="surface_downward_x_stress"   unit="N/m2"                            /> 
     
    398398      <!-- V grid --> 
    399399       
    400       <field_group id="grid_V"   grid_ref="grid_V_2D"> 
     400      <field_group id="grid_V"   grid_ref="grid_V_2D" operation="instant"> 
    401401         <field id="e3v"          long_name="V-cell thickness"                                       standard_name="cell_thickness"              unit="m"          grid_ref="grid_V_3D" /> 
    402402         <field id="vtau"         long_name="Wind Stress along j-axis"                               standard_name="surface_downward_y_stress"   unit="N/m2"                            /> 
     
    433433      <!-- W grid --> 
    434434       
    435       <field_group id="grid_W" grid_ref="grid_W_3D"> 
     435      <field_group id="grid_W" grid_ref="grid_W_3D" operation="instant"> 
    436436        <field id="e3w"          long_name="W-cell thickness"                     standard_name="cell_thickness"              unit="m"    /> 
    437437        <field id="woce"         long_name="ocean vertical velocity"              standard_name="upward_sea_water_velocity"   unit="m/s"  /> 
     
    466466      <!-- scalar variables available with key_diaar5 --> 
    467467 
    468       <field_group id="scalar"  domain_ref="1point" > 
     468      <field_group id="scalar"  domain_ref="1point" operation="instant"> 
    469469         <field id="voltot"     long_name="global total volume"                          standard_name="sea_water_volume"                               unit="m3"   /> 
    470470         <field id="sshtot"     long_name="global mean ssh"                              standard_name="global_average_sea_level_change"                unit="m"    /> 
     
    495495      <!-- LIM3 scalar variables --> 
    496496 
    497       <field_group id="SBC_scalar"  domain_ref="1point" > 
     497      <field_group id="SBC_scalar"  domain_ref="1point" operation="instant"> 
    498498         <!-- available with ln_limdiaout --> 
    499499         <field id="ibgvoltot"    long_name="global mean ice volume"                                 unit="km3"        /> 
     
    563563      <!-- variables available with iceberg trajectories --> 
    564564 
    565       <field_group id="icbvar" domain_ref="grid_T"  >  
     565      <field_group id="icbvar" domain_ref="grid_T" operation="instant">  
    566566        <field id="berg_melt"          long_name="icb melt rate of icebergs"                       unit="kg/m2/s"                    /> 
    567567        <field id="berg_buoy_melt"     long_name="icb buoyancy component of iceberg melt rate"     unit="kg/m2/s"                    /> 
     
    613613    --> 
    614614 
    615     <field_group id="trendT" grid_ref="grid_T_3D"> 
     615    <field_group id="trendT" grid_ref="grid_T_3D" operation="instant"> 
    616616      <!-- variables available with ln_tra_trd --> 
    617617      <field id="ttrd_xad"      long_name="temperature-trend: i-advection"                                                                                          unit="degC/s"                        /> 
     
    691691    </field_group> 
    692692 
    693     <field_group id="trendU" grid_ref="grid_U_3D"> 
     693    <field_group id="trendU" grid_ref="grid_U_3D" operation="instant"> 
    694694     <!-- variables available with ln_dyn_trd --> 
    695695     <field id="utrd_hpg"       long_name="i-trend: hydrostatic pressure gradient"          unit="m/s^2"                        /> 
     
    711711    </field_group> 
    712712 
    713     <field_group id="trendV" grid_ref="grid_V_3D"> 
     713    <field_group id="trendV" grid_ref="grid_V_3D" operation="instant"> 
    714714     <!-- variables available with ln_dyn_trd --> 
    715715     <field id="vtrd_hpg"       long_name="j-trend: hydrostatic pressure gradient"          unit="m/s^2"                        /> 
     
    739739      <!-- ptrc on T grid --> 
    740740 
    741      <field_group id="ptrc_T" grid_ref="grid_T_3D"> 
     741     <field_group id="ptrc_T" grid_ref="grid_T_3D" operation="instant"> 
    742742       <field id="DIC"          long_name="Dissolved inorganic Concentration"        unit="mmol/m3" /> 
    743743       <field id="DIC_E3T"      long_name="DIC * E3T"                                unit="mmol/m2" > DIC * e3t </field > 
     
    809809     <!-- PISCES additional diagnostics on T grid  --> 
    810810 
    811      <field_group id="diad_T" grid_ref="grid_T_2D"> 
     811     <field_group id="diad_T" grid_ref="grid_T_2D" operation="instant"> 
    812812       <field id="PH"          long_name="PH"                                      unit="1"          grid_ref="grid_T_3D" /> 
    813813       <field id="CO3"         long_name="Bicarbonates"                            unit="mol/m3"     grid_ref="grid_T_3D" /> 
     
    926926     </field_group> 
    927927 
    928      <field_group id="PISCES_scalar"  domain_ref="1point" > 
     928     <field_group id="PISCES_scalar"  domain_ref="1point" operation="instant"> 
    929929       <field id="pno3tot"         long_name="global mean nitrate concentration"                  unit="mol/m3"   /> 
    930930       <field id="ppo4tot"         long_name="global mean phosphorus concentration"               unit="mol/m3"   /> 
     
    946946    --> 
    947947 
    948     <field_group id="mooring" > 
     948    <field_group id="mooring" operation="instant"> 
    949949      <field field_ref="toce"         name="thetao"   long_name="sea_water_potential_temperature"      /> 
    950950      <field field_ref="soce"         name="so"       long_name="sea_water_salinity"                   /> 
     
    980980    </field_group> 
    981981 
    982     <field_group id="groupT" > 
     982    <field_group id="groupT" operation="instant"> 
    983983      <field field_ref="toce"         name="thetao"   long_name="sea_water_potential_temperature"               /> 
    984984      <field field_ref="soce"         name="so"       long_name="sea_water_salinity"                            /> 
     
    10031003    </field_group> 
    10041004     
    1005     <field_group id="groupU" > 
     1005    <field_group id="groupU" operation="instant"> 
    10061006      <field field_ref="uoce"         name="uo"      long_name="sea_water_x_velocity"      /> 
    10071007      <field field_ref="ssu"          name="uos"     long_name="sea_surface_x_velocity"    /> 
     
    10091009    </field_group> 
    10101010     
    1011     <field_group id="groupV" > 
     1011    <field_group id="groupV" operation="instant"> 
    10121012      <field field_ref="voce"         name="vo"      long_name="sea_water_y_velocity"      /> 
    10131013      <field field_ref="ssv"          name="vos"     long_name="sea_surface_y_velocity"    /> 
     
    10151015    </field_group> 
    10161016     
    1017     <field_group id="groupW" > 
     1017    <field_group id="groupW" operation="instant"> 
    10181018      <field field_ref="woce"         name="wo"       long_name="ocean vertical velocity"  /> 
    10191019    </field_group> 
  • branches/UKMO/dev_r5518_Surge_Modelling/NEMOGCM/CONFIG/AMM7_SURGE/EXP00/iodef.xml

    r6269 r6270  
    2424     
    2525      <file_group id="1ts" output_freq="1ts"  output_level="10" enabled=".TRUE."/> <!-- 1 time step files --> 
     26      <file_group id="15m" output_freq="15m"  output_level="10" enabled=".TRUE."/> <!-- 1 time step files --> 
    2627 
    27       <file_group id="1h" output_freq="1h"  output_level="10" enabled=".TRUE."/> <!-- 1h files --> 
     28      <file_group id="1h"  output_freq="1h"   output_level="10" enabled=".TRUE."> <!-- 1h files --> 
     29        <file id="file4" name_suffix="_grid_T" description="ocean T grid variables" > 
     30          <field field_ref="ssh"          name="zos"      long_name="sea_surface_height_above_geoid"            operation="instant"      /> 
     31          <field field_ref="ssh2"         name="zossq"    long_name="square_of_sea_surface_height_above_geoid"  operation="instant"      /> 
     32          <field field_ref="taum"         /> 
     33        </file> 
     34        
     35        <file id="file5" name_suffix="_grid_U" description="ocean U grid variables" > 
     36          <field field_ref="uoce"         name="uo"      long_name="sea_water_x_velocity"      operation="instant" /> 
     37         <field field_ref="utau"         name="tauuo"   long_name="surface_downward_x_stress" operation="instant" /> 
     38        </file> 
     39 
     40        <file id="file6" name_suffix="_grid_V" description="ocean V grid variables" > 
     41          <field field_ref="voce"         name="vo"      long_name="sea_water_y_velocity"      operation="instant" /> 
     42          <field field_ref="vtau"         name="tauvo"   long_name="surface_downward_y_stress" operation="instant" /> 
     43        </file> 
     44 
     45      </file_group> 
     46        
    2847      <file_group id="2h" output_freq="2h"  output_level="10" enabled=".TRUE."/> <!-- 2h files --> 
    2948      <file_group id="3h" output_freq="3h"  output_level="10" enabled=".TRUE."/> <!-- 3h files -->      
     
    3150      <file_group id="6h" output_freq="6h"  output_level="10" enabled=".TRUE."/> <!-- 6h files --> 
    3251      
    33       <file_group id="1d" output_freq="1d"  output_level="10" enabled=".TRUE."> <!-- 1d files --> 
    34  
    35    <file id="file1" name_suffix="_grid_T" description="ocean T grid variables" > 
    36      <field field_ref="sst"          name="tos" /> 
    37      <field field_ref="sss"          name="sos" /> 
    38      <field field_ref="ssh"          name="zos" /> 
    39    </file> 
    40  
    41    <file id="file2" name_suffix="_grid_U" description="ocean U grid variables" > 
    42      <field field_ref="ssu"          name="uos" /> 
    43    </file> 
    44     
    45    <file id="file3" name_suffix="_grid_V" description="ocean V grid variables" > 
    46      <field field_ref="ssv"          name="vos" /> 
    47    </file> 
    48     
    49       </file_group> 
     52      <file_group id="1d" output_freq="1d"  output_level="10" enabled=".TRUE."/> <!-- 1d files --> 
    5053 
    5154      <file_group id="3d" output_freq="3d"  output_level="10" enabled=".TRUE."/> <!-- 3d files -->     
    5255 
    53       <file_group id="5d" output_freq="5d"  output_level="10" enabled=".TRUE.">  <!-- 5d files -->    
    54  
    55    <file id="file4" name_suffix="_grid_T" description="ocean T grid variables" > 
    56      <field field_ref="toce"         name="thetao" /> 
    57      <field field_ref="soce"         name="so"     /> 
    58      <field field_ref="sst"          name="tos"    /> 
    59      <field field_ref="sst2"         name="tossq"  /> 
    60      <field field_ref="sss"          name="sos"    /> 
    61      <field field_ref="ssh"          name="zos"    /> 
    62      <field field_ref="ssh2"         name="zossq"  /> 
    63      <field field_ref="empmr"        name="wfo"    /> 
    64      <field field_ref="qsr"          name="rsntds" /> 
    65      <field field_ref="qt"           name="tohfls" /> 
    66      <field field_ref="taum"     /> 
    67      <field field_ref="mldkz5"   /> 
    68      <field field_ref="mldr10_1" /> 
    69    </file> 
    70     
    71    <file id="file5" name_suffix="_grid_U" description="ocean U grid variables" > 
    72      <field field_ref="uoce"         name="uo"    /> 
    73      <field field_ref="ssu"          name="uos"   /> 
    74      <field field_ref="utau"         name="tauuo" /> 
    75    </file> 
    76     
    77    <file id="file6" name_suffix="_grid_V" description="ocean V grid variables" > 
    78      <field field_ref="voce"         name="vo"    /> 
    79      <field field_ref="ssv"          name="vos"   /> 
    80      <field field_ref="vtau"         name="tauvo" /> 
    81    </file> 
    82     
    83    <file id="file7" name_suffix="_grid_W" description="ocean W grid variables" > 
    84      <field field_ref="woce"         name="wo"     /> 
    85      <field field_ref="avt"          name="difvho" /> 
    86    </file> 
    87     
    88       </file_group> 
     56      <file_group id="5d" output_freq="5d"  output_level="10" enabled=".TRUE."/>  <!-- 5d files -->    
    8957 
    9058      <file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE."/> <!-- real monthly files --> 
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