Changeset 6372 for branches/UKMO/dev_r5518_debug_isf_restart/NEMOGCM/CONFIG
- Timestamp:
- 2016-03-08T11:12:40+01:00 (8 years ago)
- Location:
- branches/UKMO/dev_r5518_debug_isf_restart/NEMOGCM/CONFIG
- Files:
-
- 1 deleted
- 19 edited
- 1 copied
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AMM12/EXP00/namelist_cfg (modified) (2 diffs)
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C1D_PAPA/EXP00/namelist_cfg (modified) (3 diffs)
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GYRE/EXP00/namelist_cfg (modified) (2 diffs)
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GYRE_BFM/EXP00/namelist_cfg (modified) (1 diff)
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GYRE_XIOS/EXP00/domain_def.xml (copied) (copied from branches/UKMO/dev_r5518_debug_isf_restart/NEMOGCM/CONFIG/GYRE_XIOS/EXP00/domain_def.xml)
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GYRE_XIOS/EXP00/file_def.xml (deleted)
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GYRE_XIOS/EXP00/iodef.xml (modified) (4 diffs)
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GYRE_XIOS/EXP00/namelist_cfg (modified) (1 diff)
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GYRE_XIOS/cpp_GYRE_XIOS.fcm (modified) (1 diff)
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ORCA2_LIM/EXP00/1_namelist_cfg (modified) (1 diff)
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ORCA2_LIM/EXP00/iodef.xml (modified) (1 diff)
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ORCA2_LIM/EXP00/namelist_cfg (modified) (1 diff)
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ORCA2_LIM3/EXP00/iodef.xml (modified) (1 diff)
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ORCA2_LIM3/EXP00/namelist_cfg (modified) (1 diff)
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ORCA2_LIM_CFC_C14b/EXP00/1_namelist_cfg (modified) (3 diffs)
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ORCA2_LIM_CFC_C14b/EXP00/namelist_cfg (modified) (1 diff)
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ORCA2_LIM_PISCES/EXP00/namelist_cfg (modified) (1 diff)
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SHARED/field_def.xml (modified) (9 diffs)
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SHARED/namelist_ice_lim3_ref (modified) (2 diffs)
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SHARED/namelist_ref (modified) (7 diffs)
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SHARED/namelist_top_ref (modified) (1 diff)
Legend:
- Unmodified
- Added
- Removed
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branches/UKMO/dev_r5518_debug_isf_restart/NEMOGCM/CONFIG/AMM12/EXP00/namelist_cfg
r6371 r6372 200 200 / 201 201 !----------------------------------------------------------------------- 202 &namobc ! open boundaries parameters ("key_obc") 203 !----------------------------------------------------------------------- 204 / 205 !----------------------------------------------------------------------- 202 206 &namagrif ! AGRIF zoom ("key_agrif") 203 207 !----------------------------------------------------------------------- … … 365 369 / 366 370 !----------------------------------------------------------------------- 367 &namzdf_tmx_new ! new tidal mixing parameterization ("key_zdftmx_new")368 !-----------------------------------------------------------------------369 /370 !-----------------------------------------------------------------------371 371 &namsol ! elliptic solver / island / free surface 372 372 !----------------------------------------------------------------------- -
branches/UKMO/dev_r5518_debug_isf_restart/NEMOGCM/CONFIG/C1D_PAPA/EXP00/namelist_cfg
r6371 r6372 141 141 &namtra_qsr ! penetrative solar radiation 142 142 !----------------------------------------------------------------------- 143 ! ! file name ! frequency (hours) ! variable ! time interp. ! clim ! 'yearly'/ ! weights ! rotation ! land/sea mask !144 ! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! filename !145 sn_chl ='chlorophyll_PAPASTATION', -1 , 'CHLA' , .true. , .true. , 'yearly' , '' , '' , ''146 143 / 147 144 !----------------------------------------------------------------------- … … 176 173 !----------------------------------------------------------------------- 177 174 &namcla ! cross land advection 175 !----------------------------------------------------------------------- 176 / 177 !----------------------------------------------------------------------- 178 &namobc ! open boundaries parameters ("key_obc") 178 179 !----------------------------------------------------------------------- 179 180 / … … 303 304 / 304 305 !----------------------------------------------------------------------- 305 &namzdf_tmx_new ! new tidal mixing parameterization ("key_zdftmx_new")306 !-----------------------------------------------------------------------307 /308 !-----------------------------------------------------------------------309 306 &namsol ! elliptic solver / island / free surface 310 307 !----------------------------------------------------------------------- -
branches/UKMO/dev_r5518_debug_isf_restart/NEMOGCM/CONFIG/GYRE/EXP00/namelist_cfg
r6371 r6372 160 160 / 161 161 !----------------------------------------------------------------------- 162 &namobc ! open boundaries parameters ("key_obc") 163 !----------------------------------------------------------------------- 164 / 165 !----------------------------------------------------------------------- 162 166 &namagrif ! AGRIF zoom ("key_agrif") 163 167 !----------------------------------------------------------------------- … … 300 304 / 301 305 !----------------------------------------------------------------------- 302 &namzdf_tmx_new ! new tidal mixing parameterization ("key_zdftmx_new")303 !-----------------------------------------------------------------------304 /305 !-----------------------------------------------------------------------306 306 &namsol ! elliptic solver / island / free surface 307 307 !----------------------------------------------------------------------- -
branches/UKMO/dev_r5518_debug_isf_restart/NEMOGCM/CONFIG/GYRE_BFM/EXP00/namelist_cfg
r6371 r6372 165 165 / 166 166 !----------------------------------------------------------------------- 167 &namobc ! open boundaries parameters ("key_obc") 168 !----------------------------------------------------------------------- 169 / 170 !----------------------------------------------------------------------- 167 171 &namagrif ! AGRIF zoom ("key_agrif") 168 172 !----------------------------------------------------------------------- -
branches/UKMO/dev_r5518_debug_isf_restart/NEMOGCM/CONFIG/GYRE_XIOS/EXP00/iodef.xml
r6371 r6372 2 2 <simulation> 3 3 4 <context id="nemo" >4 <context id="nemo" time_origin="1900-01-01 00:00:00" > 5 5 6 6 <!-- $id$ --> … … 19 19 = put the variables you want... = 20 20 ============================================================================================================ 21 --> 21 --> 22 23 <file_definition type="multiple_file" name="@expname@_@freq@_@startdate@_@enddate@" sync_freq="1d" min_digits="4"> 24 25 <file_group id="1ts" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files --> 26 <file_group id="1h" output_freq="1h" output_level="10" enabled=".TRUE."/> <!-- 1h files --> 27 <file_group id="2h" output_freq="2h" output_level="10" enabled=".TRUE."/> <!-- 2h files --> 28 <file_group id="3h" output_freq="3h" output_level="10" enabled=".TRUE."/> <!-- 3h files --> 29 <file_group id="4h" output_freq="4h" output_level="10" enabled=".TRUE."/> <!-- 4h files --> 30 <file_group id="6h" output_freq="6h" output_level="10" enabled=".TRUE."/> <!-- 6h files --> 31 32 <file_group id="1d" output_freq="1d" output_level="10" enabled=".TRUE."/> <!-- 1d files --> 33 <file_group id="3d" output_freq="3d" output_level="10" enabled=".TRUE."/> <!-- 3d files --> 34 <file_group id="5d" output_freq="5d" output_level="10" enabled=".TRUE."> <!-- 5d files --> 35 36 <file id="file1" name_suffix="_grid_T" description="ocean T grid variables" > 37 <field field_ref="toce" name="votemper" /> 38 <field field_ref="soce" name="vosaline" /> 39 <field field_ref="sst" name="sosstsst" /> 40 <field field_ref="sss" name="sosaline" /> 41 <field field_ref="ssh" name="sossheig" /> 42 <field field_ref="empmr" name="sowaflup" /> 43 <field field_ref="qsr" name="soshfldo" /> 44 <field field_ref="saltflx" name="sosfldow" /> 45 <field field_ref="qt" name="sohefldo" /> 46 <field field_ref="mldr10_1" name="somxl010" /> 47 <field field_ref="mldkz5" name="somixhgt" /> 48 </file> 49 50 <file id="file2" name_suffix="_grid_U" description="ocean U grid variables" > 51 <field field_ref="uoce" name="vozocrtx" /> 52 <field field_ref="utau" name="sozotaux" /> 53 </file> 54 55 <file id="file3" name_suffix="_grid_V" description="ocean V grid variables" > 56 <field field_ref="voce" name="vomecrty" /> 57 <field field_ref="vtau" name="sometauy" /> 58 </file> 59 60 <file id="file4" name_suffix="_grid_W" description="ocean W grid variables" > 61 <field field_ref="woce" name="vovecrtz" /> 62 <field field_ref="avt" name="votkeavt" /> 63 <field field_ref="aht2d" name="soleahtw" /> 64 </file> 22 65 23 <file_definition src="./file_def.xml"/> 66 </file_group> 67 68 <file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE."/> <!-- real monthly files --> 69 <file_group id="2m" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files --> 70 <file_group id="3m" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files --> 71 <file_group id="4m" output_freq="4mo" output_level="10" enabled=".TRUE."/> <!-- real 4m files --> 72 <file_group id="6m" output_freq="6mo" output_level="10" enabled=".TRUE."/> <!-- real 6m files --> 24 73 25 <!-- 26 74 <file_group id="1y" output_freq="1y" output_level="10" enabled=".TRUE."/> <!-- real yearly files --> 75 <file_group id="2y" output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files --> 76 <file_group id="5y" output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files --> 77 <file_group id="10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files --> 78 79 </file_definition> 80 81 <!-- 27 82 ============================================================================================================ 28 83 = grid definition = = DO NOT CHANGE = … … 45 100 46 101 <grid_definition> 47 <grid id="grid_T_2D" > 48 <domain id="grid_T" /> 49 </grid> 50 <grid id="grid_T_3D" > 51 <domain id="grid_T" /> 52 <axis id="deptht" /> 53 </grid> 54 <grid id="grid_U_2D" > 55 <domain id="grid_U" /> 56 </grid> 57 <grid id="grid_U_3D" > 58 <domain id="grid_U" /> 59 <axis id="depthu" /> 60 </grid> 61 <grid id="grid_V_2D" > 62 <domain id="grid_V" /> 63 </grid> 64 <grid id="grid_V_3D" > 65 <domain id="grid_V" /> 66 <axis id="depthv" /> 67 </grid> 68 <grid id="grid_W_2D" > 69 <domain id="grid_W" /> 70 </grid> 71 <grid id="grid_W_3D" > 72 <domain id="grid_W" /> 73 <axis id="depthw" /> 74 </grid> 75 <grid id="scalarpoint" /> 76 102 <grid id="grid_T_2D" domain_ref="grid_T"/> 103 <grid id="grid_T_3D" domain_ref="grid_T" axis_ref="deptht"/> 104 <grid id="grid_U_2D" domain_ref="grid_U"/> 105 <grid id="grid_U_3D" domain_ref="grid_U" axis_ref="depthu"/> 106 <grid id="grid_V_2D" domain_ref="grid_V"/> 107 <grid id="grid_V_3D" domain_ref="grid_V" axis_ref="depthv"/> 108 <grid id="grid_W_2D" domain_ref="grid_W"/> 109 <grid id="grid_W_3D" domain_ref="grid_W" axis_ref="depthw"/> 77 110 </grid_definition> 78 111 … … 87 120 We must have buffer_size > jpi*jpj*jpk*8 (with jpi and jpj the subdomain size) 88 121 --> 89 <variable id="info_level" type="int">0</variable> 90 <variable id="using_server" type="bool">false</variable> 91 <variable id="using_oasis" type="bool">false</variable> 122 <variable id="buffer_size" type="integer">10000000</variable> 123 <variable id="buffer_server_factor_size" type="integer">2</variable> 124 <variable id="info_level" type="integer">0</variable> 125 <variable id="using_server" type="boolean">false</variable> 126 <variable id="using_oasis" type="boolean">false</variable> 92 127 <variable id="oasis_codes_id" type="string" >oceanx</variable> 93 128 -
branches/UKMO/dev_r5518_debug_isf_restart/NEMOGCM/CONFIG/GYRE_XIOS/EXP00/namelist_cfg
r6371 r6372 154 154 / 155 155 !----------------------------------------------------------------------- 156 &namobc ! open boundaries parameters ("key_obc") 157 !----------------------------------------------------------------------- 158 / 159 !----------------------------------------------------------------------- 156 160 &namagrif ! AGRIF zoom ("key_agrif") 157 161 !----------------------------------------------------------------------- -
branches/UKMO/dev_r5518_debug_isf_restart/NEMOGCM/CONFIG/GYRE_XIOS/cpp_GYRE_XIOS.fcm
r6371 r6372 1 bld::tool::fppkeys key_dynspg_flt key_ldfslp key_zdftke key_iomput key_mpp_mpi key_xios21 bld::tool::fppkeys key_dynspg_flt key_ldfslp key_zdftke key_iomput key_mpp_mpi -
branches/UKMO/dev_r5518_debug_isf_restart/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/1_namelist_cfg
r6371 r6372 6 6 !----------------------------------------------------------------------- 7 7 cn_exp = "Agulhas" ! experience name 8 nn_itend = 10950 ! last time step8 nn_itend = 480 ! last time step 9 9 nn_stock = 10950 ! frequency of creation of a restart file (modulo referenced to 1) 10 10 nn_write = 10950 ! frequency of write in the output file (modulo referenced to nn_it000) -
branches/UKMO/dev_r5518_debug_isf_restart/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/iodef.xml
r6371 r6372 153 153 </context> 154 154 155 <context id="1_nemo" time_origin="1950-01-01 00:00:00" >156 157 <!-- $id$ -->158 159 <!--160 ============================================================================================================161 = definition of all existing variables =162 = DO NOT CHANGE =163 ============================================================================================================164 -->165 <field_definition src="./field_def.xml"/>166 <!--167 ============================================================================================================168 = output files definition =169 = Define your own files =170 = put the variables you want... =171 ============================================================================================================172 -->173 174 <file_definition type="multiple_file" name="@expname@_@freq@_@startdate@_@enddate@" sync_freq="10d" min_digits="4">175 176 <file_group id="1ts" output_freq="1ts" output_level="10" enabled=".TRUE."/> <!-- 1 time step files -->177 <file_group id="1h" output_freq="1h" output_level="10" enabled=".TRUE."/> <!-- 1h files -->178 <file_group id="2h" output_freq="2h" output_level="10" enabled=".TRUE."/> <!-- 2h files -->179 <file_group id="3h" output_freq="3h" output_level="10" enabled=".TRUE."/> <!-- 3h files -->180 <file_group id="4h" output_freq="4h" output_level="10" enabled=".TRUE."/> <!-- 4h files -->181 <file_group id="6h" output_freq="6h" output_level="10" enabled=".TRUE."/> <!-- 6h files -->182 <file_group id="1d" output_freq="1d" output_level="10" enabled=".TRUE."/> <!-- 1d files -->183 <file_group id="3d" output_freq="3d" output_level="10" enabled=".TRUE."/> <!-- 3d files -->184 185 <file_group id="5d" output_freq="5d" output_level="10" enabled=".TRUE." > <!-- 5d files -->186 187 <file id="file1" name_suffix="_grid_T" description="ocean T grid variables" >188 <field field_ref="sst" name="tos" long_name="sea_surface_temperature" />189 <field field_ref="sss" name="sos" long_name="sea_surface_salinity" />190 <field field_ref="ssh" name="zos" long_name="sea_surface_height_above_geoid" />191 <field field_ref="toce" name="thetao" long_name="sea_water_potential_temperature" />192 <field field_ref="soce" name="so" long_name="sea_water_salinity" />193 <field field_ref="sst2" name="tossq" long_name="square_of_sea_surface_temperature" />194 <field field_ref="ssh2" name="zossq" long_name="square_of_sea_surface_height_above_geoid" />195 <field field_ref="mldkz5" />196 <field field_ref="mldr10_1" />197 <field field_ref="empmr" name="wfo" long_name="water_flux_into_sea_water" />198 <field field_ref="qsr" name="rsntds" long_name="surface_net_downward_shortwave_flux" />199 <field field_ref="qt" name="tohfls" long_name="surface_net_downward_total_heat_flux" />200 <field field_ref="saltflx" name="sosflxdo" />201 <field field_ref="taum" name="taum" />202 <field field_ref="wspd" name="sowindsp" />203 <field field_ref="precip" name="soprecip" />204 </file>205 206 <file id="file3" name_suffix="_grid_U" description="ocean U grid variables" >207 <field field_ref="ssu" name="uos" long_name="sea_surface_x_velocity" />208 <field field_ref="uoce" name="uo" long_name="sea_water_x_velocity" />209 <field field_ref="utau" name="tauuo" long_name="surface_downward_x_stress" />210 <!-- variables available with MLE211 <field field_ref="psiu_mle" name="psiu_mle" long_name="MLE_streamfunction_along_i-axis" />212 -->213 </file>214 215 <file id="file4" name_suffix="_grid_V" description="ocean V grid variables" >216 <field field_ref="ssv" name="vos" long_name="sea_surface_y_velocity" />217 <field field_ref="voce" name="vo" long_name="sea_water_y_velocity" />218 <field field_ref="vtau" name="tauvo" long_name="surface_downward_y_stress" />219 <!-- variables available with MLE220 <field field_ref="psiv_mle" name="psiv_mle" long_name="MLE_streamfunction_along_j-axis" />221 -->222 </file>223 224 <file id="file5" name_suffix="_grid_W" description="ocean W grid variables" >225 <field field_ref="woce" name="wo" long_name="ocean vertical velocity" />226 <field field_ref="avt" name="difvho" long_name="ocean_vertical_heat_diffusivity" />227 </file>228 <!--229 <file id="file6" name_suffix="_icemod" description="ice variables" >230 <field field_ref="ice_pres" />231 <field field_ref="snowthic_cea" name="snd" long_name="surface_snow_thickness" />232 <field field_ref="icethic_cea" name="sit" long_name="sea_ice_thickness" />233 <field field_ref="iceprod_cea" name="sip" long_name="sea_ice_thickness" />234 <field field_ref="ist_ipa" />235 <field field_ref="uice_ipa" />236 <field field_ref="vice_ipa" />237 <field field_ref="utau_ice" />238 <field field_ref="vtau_ice" />239 <field field_ref="qsr_io_cea" />240 <field field_ref="qns_io_cea" />241 <field field_ref="snowpre" />242 </file>243 244 <file id="file8" name_suffix="_Tides" description="tidal harmonics" >245 <field field_ref="M2x" name="M2x" long_name="M2 Elevation harmonic real part" />246 <field field_ref="M2y" name="M2y" long_name="M2 Elevation harmonic imaginary part" />247 <field field_ref="M2x_u" name="M2x_u" long_name="M2 current barotrope along i-axis harmonic real part " />248 <field field_ref="M2y_u" name="M2y_u" long_name="M2 current barotrope along i-axis harmonic imaginary part " />249 <field field_ref="M2x_v" name="M2x_v" long_name="M2 current barotrope along j-axis harmonic real part " />250 <field field_ref="M2y_v" name="M2y_v" long_name="M2 current barotrope along j-axis harmonic imaginary part " />251 </file>252 -->253 </file_group>254 255 256 <file_group id="1m" output_freq="1mo" output_level="10" enabled=".TRUE."/> <!-- real monthly files -->257 258 259 <file_group id="2m" output_freq="2mo" output_level="10" enabled=".TRUE."/> <!-- real 2m files -->260 <file_group id="3m" output_freq="3mo" output_level="10" enabled=".TRUE."/> <!-- real 3m files -->261 <file_group id="4m" output_freq="4mo" output_level="10" enabled=".TRUE."/> <!-- real 4m files -->262 <file_group id="6m" output_freq="6mo" output_level="10" enabled=".TRUE."/> <!-- real 6m files -->263 264 <file_group id="1y" output_freq="1y" output_level="10" enabled=".TRUE."/> <!-- real yearly files -->265 <file_group id="2y" output_freq="2y" output_level="10" enabled=".TRUE."/> <!-- real 2y files -->266 <file_group id="5y" output_freq="5y" output_level="10" enabled=".TRUE."/> <!-- real 5y files -->267 <file_group id="10y" output_freq="10y" output_level="10" enabled=".TRUE."/> <!-- real 10y files -->268 269 </file_definition>270 271 <!--272 ============================================================================================================273 = grid definition = = DO NOT CHANGE =274 ============================================================================================================275 -->276 277 <axis_definition>278 <axis id="deptht" long_name="Vertical T levels" unit="m" positive="down" />279 <axis id="depthu" long_name="Vertical U levels" unit="m" positive="down" />280 <axis id="depthv" long_name="Vertical V levels" unit="m" positive="down" />281 <axis id="depthw" long_name="Vertical W levels" unit="m" positive="down" />282 <axis id="nfloat" long_name="Float number" unit="-" />283 <axis id="icbcla" long_name="Iceberg class" unit="-" />284 </axis_definition>285 286 <domain_definition src="./domain_def.xml"/>287 288 <grid_definition>289 <grid id="grid_T_2D" domain_ref="grid_T"/>290 <grid id="grid_T_3D" domain_ref="grid_T" axis_ref="deptht"/>291 <grid id="grid_U_2D" domain_ref="grid_U"/>292 <grid id="grid_U_3D" domain_ref="grid_U" axis_ref="depthu"/>293 <grid id="grid_V_2D" domain_ref="grid_V"/>294 <grid id="grid_V_3D" domain_ref="grid_V" axis_ref="depthv"/>295 <grid id="grid_W_2D" domain_ref="grid_W"/>296 <grid id="grid_W_3D" domain_ref="grid_W" axis_ref="depthw"/>297 </grid_definition>298 </context>299 155 300 156 <context id="xios"> -
branches/UKMO/dev_r5518_debug_isf_restart/NEMOGCM/CONFIG/ORCA2_LIM/EXP00/namelist_cfg
r6371 r6372 165 165 / 166 166 !----------------------------------------------------------------------- 167 &namzdf_tmx_new ! new tidal mixing parameterization ("key_zdftmx_new")168 !-----------------------------------------------------------------------169 /170 !-----------------------------------------------------------------------171 167 &namsol ! elliptic solver / island / free surface 172 168 !----------------------------------------------------------------------- -
branches/UKMO/dev_r5518_debug_isf_restart/NEMOGCM/CONFIG/ORCA2_LIM3/EXP00/iodef.xml
r6371 r6372 61 61 <file id="file2" name_suffix="_SBC" description="surface fluxes variables" > <!-- time step automaticaly defined based on nn_fsbc --> 62 62 <field field_ref="empmr" name="wfo" /> 63 <field field_ref="emp_oce" name="emp_oce" long_name="Evap minus Precip over ocean" />64 <field field_ref="emp_ice" name="emp_ice" long_name="Evap minus Precip over ice" />65 63 <field field_ref="qsr_oce" name="qsr_oce" /> 66 64 <field field_ref="qns_oce" name="qns_oce" /> -
branches/UKMO/dev_r5518_debug_isf_restart/NEMOGCM/CONFIG/ORCA2_LIM3/EXP00/namelist_cfg
r6371 r6372 168 168 / 169 169 !----------------------------------------------------------------------- 170 &namzdf_tmx_new ! new tidal mixing parameterization ("key_zdftmx_new")171 !-----------------------------------------------------------------------172 /173 !-----------------------------------------------------------------------174 170 &namsol ! elliptic solver / island / free surface 175 171 !----------------------------------------------------------------------- -
branches/UKMO/dev_r5518_debug_isf_restart/NEMOGCM/CONFIG/ORCA2_LIM_CFC_C14b/EXP00/1_namelist_cfg
r6371 r6372 5 5 !! namsbc_cpl, namtra_qsr, namsbc_rnf, 6 6 !! namsbc_apr, namsbc_ssr, namsbc_alb) 7 !! 4 - lateral boundary (namlbc, namcla, nam agrif, nambdy, nambdy_tide)7 !! 4 - lateral boundary (namlbc, namcla, namobc, namagrif, nambdy, nambdy_tide) 8 8 !! 5 - bottom boundary (nambfr, nambbc, nambbl) 9 9 !! 6 - Tracer (nameos, namtra_adv, namtra_ldf, namtra_dmp) … … 303 303 !! namlbc lateral momentum boundary condition 304 304 !! namcla cross land advection 305 !! namobc open boundaries parameters ("key_obc") 305 306 !! namagrif agrif nested grid ( read by child model only ) ("key_agrif") 306 307 !! nambdy Unstructured open boundaries ("key_bdy") … … 318 319 !----------------------------------------------------------------------- 319 320 nn_cla = 0 ! advection between 2 ocean pts separates by land 321 / 322 !----------------------------------------------------------------------- 323 &namobc ! open boundaries parameters ("key_obc") 324 !----------------------------------------------------------------------- 325 ln_obc_clim = .false. ! climatological obc data files (T) or not (F) 326 ln_vol_cst = .true. ! impose the total volume conservation (T) or not (F) 327 ln_obc_fla = .false. ! Flather open boundary condition 328 nn_obcdta = 1 ! = 0 the obc data are equal to the initial state 329 ! = 1 the obc data are read in 'obc.dta' files 330 cn_obcdta = 'annual' ! set to annual if obc datafile hold 1 year of data 331 ! set to monthly if obc datafile hold 1 month of data 332 rn_dpein = 1. ! damping time scale for inflow at east open boundary 333 rn_dpwin = 1. ! - - - west - - 334 rn_dpnin = 1. ! - - - north - - 335 rn_dpsin = 1. ! - - - south - - 336 rn_dpeob = 3000. ! time relaxation (days) for the east open boundary 337 rn_dpwob = 15. ! - - - west - - 338 rn_dpnob = 3000. ! - - - north - - 339 rn_dpsob = 15. ! - - - south - - 340 rn_volemp = 1. ! = 0 the total volume change with the surface flux (E-P-R) 341 ! = 1 the total volume remains constant 320 342 / 321 343 !----------------------------------------------------------------------- -
branches/UKMO/dev_r5518_debug_isf_restart/NEMOGCM/CONFIG/ORCA2_LIM_CFC_C14b/EXP00/namelist_cfg
r6371 r6372 136 136 / 137 137 !----------------------------------------------------------------------- 138 &namobc ! open boundaries parameters ("key_obc") 139 !----------------------------------------------------------------------- 140 / 141 !----------------------------------------------------------------------- 138 142 &namagrif ! AGRIF zoom ("key_agrif") 139 143 !----------------------------------------------------------------------- -
branches/UKMO/dev_r5518_debug_isf_restart/NEMOGCM/CONFIG/ORCA2_LIM_PISCES/EXP00/namelist_cfg
r6371 r6372 165 165 / 166 166 !----------------------------------------------------------------------- 167 &namzdf_tmx_new ! new tidal mixing parameterization ("key_zdftmx_new")168 !-----------------------------------------------------------------------169 /170 !-----------------------------------------------------------------------171 167 &namsol ! elliptic solver / island / free surface 172 168 !----------------------------------------------------------------------- -
branches/UKMO/dev_r5518_debug_isf_restart/NEMOGCM/CONFIG/SHARED/field_def.xml
r6371 r6372 23 23 <field_group id="grid_T" grid_ref="grid_T_2D" > 24 24 <field id="e3t" long_name="T-cell thickness" standard_name="cell_thickness" unit="m" grid_ref="grid_T_3D"/> 25 <field id="e3t_0" long_name="Initial T-cell thickness" standard_name="ref_cell_thickness" unit="m" grid_ref="grid_T_3D"/>26 25 27 26 <field id="toce" long_name="temperature" standard_name="sea_water_potential_temperature" unit="degC" grid_ref="grid_T_3D"/> … … 60 59 <field id="alpha" long_name="thermal expansion" unit="degC-1" grid_ref="grid_T_3D" /> 61 60 <field id="beta" long_name="haline contraction" unit="1e3" grid_ref="grid_T_3D" /> 61 <field id="bn2" long_name="squared Brunt-Vaisala frequency" unit="s-1" grid_ref="grid_T_3D" /> 62 62 <field id="rhop" long_name="potential density (sigma0)" standard_name="sea_water_sigma_theta" unit="kg/m3" grid_ref="grid_T_3D" /> 63 63 … … 174 174 <field_group id="SBC" grid_ref="grid_T_2D" > <!-- time step automaticaly defined based on nn_fsbc --> 175 175 <field id="empmr" long_name="Net Upward Water Flux" standard_name="water_flux_out_of_sea_ice_and_sea_water" unit="kg/m2/s" /> 176 <field id="emp_oce" long_name="Evap minus Precip over ocean" standard_name="evap_minus_precip_over_sea_water" unit="kg/m2/s" />177 <field id="emp_ice" long_name="Evap minus Precip over ice" standard_name="evap_minus_precip_over_sea_ice" unit="kg/m2/s" />178 176 <field id="saltflx" long_name="Downward salt flux" unit="1e-3/m2/s" /> 179 177 <field id="fmmflx" long_name="Water flux due to freezing/melting" unit="kg/m2/s" /> … … 277 275 <field id="micesalt" long_name="Mean ice salinity" unit="1e-3" /> 278 276 <field id="miceage" long_name="Mean ice age" unit="years" /> 279 <field id="alb_ice" long_name="Mean albedo over sea ice" unit="" />280 <field id="albedo" long_name="Mean albedo over sea ice and ocean" unit="" />281 277 282 278 <field id="iceage_cat" long_name="Ice age for categories" unit="days" axis_ref="ncatice" /> … … 329 325 <field id="vfxsub" long_name="snw sublimation" unit="m/day" /> 330 326 <field id="vfxspr" long_name="snw precipitation on ice" unit="m/day" /> 331 <field id="vfxthin" long_name="daily thermo ice prod. for thin ice(<20cm) + open water" unit="m/day" />332 327 333 328 <field id="afxtot" long_name="area tendency (total)" unit="day-1" /> … … 371 366 <field_group id="grid_U" grid_ref="grid_U_2D"> 372 367 <field id="e3u" long_name="U-cell thickness" standard_name="cell_thickness" unit="m" grid_ref="grid_U_3D" /> 373 <field id="e3u_0" long_name="Initial U-cell thickness" standard_name="ref_cell_thickness" unit="m" grid_ref="grid_U_3D"/>374 368 <field id="utau" long_name="Wind Stress along i-axis" standard_name="surface_downward_x_stress" unit="N/m2" /> 375 369 <field id="uoce" long_name="ocean current along i-axis" standard_name="sea_water_x_velocity" unit="m/s" grid_ref="grid_U_3D" /> … … 407 401 <field_group id="grid_V" grid_ref="grid_V_2D"> 408 402 <field id="e3v" long_name="V-cell thickness" standard_name="cell_thickness" unit="m" grid_ref="grid_V_3D" /> 409 <field id="e3v_0" long_name="Initial V-cell thickness" standard_name="ref_cell_thickness" unit="m" grid_ref="grid_V_3D"/>410 403 <field id="vtau" long_name="Wind Stress along j-axis" standard_name="surface_downward_y_stress" unit="N/m2" /> 411 404 <field id="voce" long_name="ocean current along j-axis" standard_name="sea_water_y_velocity" unit="m/s" grid_ref="grid_V_3D" /> … … 462 455 <!-- avt_tide: available with key_zdftmx --> 463 456 <field id="av_tide" long_name="tidal vertical diffusivity" standard_name="ocean_vertical_tracer_diffusivity_due_to_tides" unit="m2/s" /> 464 465 <!-- variables available with key_zdftmx_new -->466 <field id="av_ratio" long_name="S over T diffusivity ratio" standard_name="salinity_over_temperature_diffusivity_ratio" unit="1" />467 <field id="av_wave" long_name="wave-induced vertical diffusivity" standard_name="ocean_vertical_tracer_diffusivity_due_to_internal_waves" unit="m2/s" />468 <field id="bn2" long_name="squared Brunt-Vaisala frequency" standard_name="squared_brunt_vaisala_frequency" unit="s-1" />469 <field id="bflx_tmx" long_name="wave-induced buoyancy flux" standard_name="buoyancy_flux_due_to_internal_waves" unit="W/kg" />470 <field id="pcmap_tmx" long_name="power consumed by wave-driven mixing" standard_name="vertically_integrated_power_consumption_by_wave_driven_mixing" unit="W/m2" grid_ref="grid_W_2D" />471 <field id="emix_tmx" long_name="power density available for mixing" standard_name="power_available_for_mixing_from_breaking_internal_waves" unit="W/kg" />472 457 473 458 <!-- variables available with key_diaar5 --> … … 865 850 <field id="Totlig" long_name="Total ligand concentation" unit="nmol/m3" grid_ref="grid_T_3D" /> 866 851 <field id="Biron" long_name="Bioavailable iron" unit="nmol/m3" grid_ref="grid_T_3D" /> 867 <field id="Sdenit" long_name="Nitrate reduction in the sediments" unit="molN/m2/s" /> 868 <field id="SedCal" long_name="Calcite burial in the sediments" unit="molC/m2/s" /> 869 <field id="SedSi" long_name="Silicon burial in the sediments" unit="molSi/m2/s" /> 870 <field id="SedC" long_name="Organic C burial in the sediments" unit="molC/m2/s" /> 852 <field id="Sdenit" long_name="Nitrate reduction in the sediments" unit="mol/m2/s" /> 871 853 <field id="Ironice" long_name="Iron input/uptake due to sea ice" unit="mol/m2/s" /> 872 854 <field id="HYDR" long_name="Iron input from hydrothemal vents" unit="mol/m2/s" grid_ref="grid_T_3D" /> -
branches/UKMO/dev_r5518_debug_isf_restart/NEMOGCM/CONFIG/SHARED/namelist_ice_lim3_ref
r6371 r6372 21 21 cn_icerst_outdir = "." ! directory in which to write output ice restarts 22 22 ln_limdyn = .true. ! ice dynamics (T) or thermodynamics only (F) 23 rn_amax_n = 0.999 ! maximum tolerated ice concentration NH 24 rn_amax_s = 0.999 ! maximum tolerated ice concentration SH 23 rn_amax = 0.999 ! maximum tolerated ice concentration 25 24 ln_limdiahsb = .false. ! check the heat and salt budgets (T) or not (F) 26 25 ln_limdiaout = .true. ! output the heat and salt budgets (T) or not (F) … … 86 85 rn_hnewice = 0.1 ! thickness for new ice formation in open water (m) 87 86 ln_frazil = .false. ! use frazil ice collection thickness as a function of wind (T) or not (F) 88 rn_maxfrazb = 1.0 ! maximum fraction of frazil ice collecting at the ice base87 rn_maxfrazb = 0.0 ! maximum fraction of frazil ice collecting at the ice base 89 88 rn_vfrazb = 0.417 ! thresold drift speed for frazil ice collecting at the ice bottom (m/s) 90 89 rn_Cfrazb = 5.0 ! squeezing coefficient for frazil ice collecting at the ice bottom -
branches/UKMO/dev_r5518_debug_isf_restart/NEMOGCM/CONFIG/SHARED/namelist_ref
r6371 r6372 5 5 !! namsbc_cpl, namtra_qsr, namsbc_rnf, 6 6 !! namsbc_apr, namsbc_ssr, namsbc_alb) 7 !! 4 - lateral boundary (namlbc, namcla, nam agrif, nambdy, nambdy_tide)7 !! 4 - lateral boundary (namlbc, namcla, namobc, namagrif, nambdy, nambdy_tide) 8 8 !! 5 - bottom boundary (nambfr, nambbc, nambbl) 9 9 !! 6 - Tracer (nameos, namtra_adv, namtra_ldf, namtra_dmp) 10 10 !! 7 - dynamics (namdyn_adv, namdyn_vor, namdyn_hpg, namdyn_spg, namdyn_ldf) 11 !! 8 - Verical physics (namzdf, namzdf_ric, namzdf_tke, namzdf_kpp, namzdf_ddm, namzdf_tmx , namzdf_tmx_new)11 !! 8 - Verical physics (namzdf, namzdf_ric, namzdf_tke, namzdf_kpp, namzdf_ddm, namzdf_tmx) 12 12 !! 9 - diagnostics (namnc4, namtrd, namspr, namflo, namhsb, namsto) 13 13 !! 10 - miscellaneous (namsol, nammpp, namctl) … … 413 413 ln_qsr_2bd = .false. ! 2 bands light penetration 414 414 ln_qsr_bio = .false. ! bio-model light penetration 415 nn_chldta = 1 ! RGB : 2D Chl data (=1), 3D Chl data (=2) or cst value (=0)415 nn_chldta = 1 ! RGB : Chl data (=1) or cst value (=0) 416 416 rn_abs = 0.58 ! RGB & 2 bands: fraction of light (rn_si1) 417 417 rn_si0 = 0.35 ! RGB & 2 bands: shortess depth of extinction … … 505 505 &namsbc_alb ! albedo parameters 506 506 !----------------------------------------------------------------------- 507 nn_ice_alb = 0 ! parameterization of ice/snow albedo 508 ! 0: Shine & Henderson-Sellers (JGR 1985) 509 ! 1: "home made" based on Brandt et al. (J. Climate 2005) 510 ! and Grenfell & Perovich (JGR 2004) 511 rn_albice = 0.53 ! albedo of bare puddled ice (values from 0.49 to 0.58) 512 ! 0.53 (default) => if nn_ice_alb=0 513 ! 0.50 (default) => if nn_ice_alb=1 507 rn_cloud = 0.06 ! cloud correction to snow and ice albedo 508 rn_albice = 0.53 ! albedo of melting ice in the arctic and antarctic 509 rn_alphd = 0.80 ! coefficients for linear interpolation used to 510 rn_alphc = 0.65 ! compute albedo between two extremes values 511 rn_alphdi = 0.72 ! (Pyane, 1972) 514 512 / 515 513 !----------------------------------------------------------------------- … … 553 551 !! namlbc lateral momentum boundary condition 554 552 !! namcla cross land advection 553 !! namobc open boundaries parameters ("key_obc") 555 554 !! namagrif agrif nested grid ( read by child model only ) ("key_agrif") 556 555 !! nambdy Unstructured open boundaries ("key_bdy") … … 569 568 !----------------------------------------------------------------------- 570 569 nn_cla = 0 ! advection between 2 ocean pts separates by land 570 / 571 !----------------------------------------------------------------------- 572 &namobc ! open boundaries parameters ("key_obc") 573 !----------------------------------------------------------------------- 574 ln_obc_clim = .false. ! climatological obc data files (T) or not (F) 575 ln_vol_cst = .true. ! impose the total volume conservation (T) or not (F) 576 ln_obc_fla = .false. ! Flather open boundary condition 577 nn_obcdta = 1 ! = 0 the obc data are equal to the initial state 578 ! = 1 the obc data are read in 'obc.dta' files 579 cn_obcdta = 'annual' ! set to annual if obc datafile hold 1 year of data 580 ! set to monthly if obc datafile hold 1 month of data 581 rn_dpein = 1. ! damping time scale for inflow at east open boundary 582 rn_dpwin = 1. ! - - - west - - 583 rn_dpnin = 1. ! - - - north - - 584 rn_dpsin = 1. ! - - - south - - 585 rn_dpeob = 3000. ! time relaxation (days) for the east open boundary 586 rn_dpwob = 15. ! - - - west - - 587 rn_dpnob = 3000. ! - - - north - - 588 rn_dpsob = 15. ! - - - south - - 589 rn_volemp = 1. ! = 0 the total volume change with the surface flux (E-P-R) 590 ! = 1 the total volume remains constant 571 591 / 572 592 !----------------------------------------------------------------------- … … 883 903 !! Tracers & Dynamics vertical physics namelists 884 904 !!====================================================================== 885 !! namzdf vertical physics 886 !! namzdf_ric richardson number dependent vertical mixing ("key_zdfric") 887 !! namzdf_tke TKE dependent vertical mixing ("key_zdftke") 888 !! namzdf_kpp KPP dependent vertical mixing ("key_zdfkpp") 889 !! namzdf_ddm double diffusive mixing parameterization ("key_zdfddm") 890 !! namzdf_tmx tidal mixing parameterization ("key_zdftmx") 891 !! namzdf_tmx_new new tidal mixing parameterization ("key_zdftmx_new") 905 !! namzdf vertical physics 906 !! namzdf_ric richardson number dependent vertical mixing ("key_zdfric") 907 !! namzdf_tke TKE dependent vertical mixing ("key_zdftke") 908 !! namzdf_kpp KPP dependent vertical mixing ("key_zdfkpp") 909 !! namzdf_ddm double diffusive mixing parameterization ("key_zdfddm") 910 !! namzdf_tmx tidal mixing parameterization ("key_zdftmx") 892 911 !!====================================================================== 893 912 ! … … 996 1015 rn_tfe_itf = 1. ! ITF tidal dissipation efficiency 997 1016 / 998 !----------------------------------------------------------------------- 999 &namzdf_tmx_new ! new tidal mixing parameterization ("key_zdftmx_new") 1000 !----------------------------------------------------------------------- 1001 nn_zpyc = 1 ! pycnocline-intensified dissipation scales as N (=1) or N^2 (=2) 1002 ln_mevar = .true. ! variable (T) or constant (F) mixing efficiency 1003 ln_tsdiff = .true. ! account for differential T/S mixing (T) or not (F) 1004 / 1017 1005 1018 !!====================================================================== 1006 1019 !! *** Miscellaneous namelists *** -
branches/UKMO/dev_r5518_debug_isf_restart/NEMOGCM/CONFIG/SHARED/namelist_top_ref
r6371 r6372 62 62 rn_ahtrc_0 = 2000. ! horizontal eddy diffusivity for tracers [m2/s] 63 63 rn_ahtrb_0 = 0. ! background eddy diffusivity for ldf_iso [m2/s] 64 rn_fact_lap = 1. ! enhanced zonal eddy diffusivity65 64 / 66 65 !-----------------------------------------------------------------------
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