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Changeset 6467 for branches/2015/nemo_v3_6_STABLE/NEMOGCM – NEMO

Ignore:
Timestamp:
2016-04-12T10:47:46+02:00 (8 years ago)
Author:
jpaul
Message:

see ticket #1711

Location:
branches/2015/nemo_v3_6_STABLE/NEMOGCM/TOOLS/SIREN
Files:
1 added
1 deleted
8 edited

Legend:

Unmodified
Added
Removed
  • branches/2015/nemo_v3_6_STABLE/NEMOGCM/TOOLS/SIREN/README

    r5037 r6467  
    1 This is a first release of SIREN. 
    21 
    3 To create SIREN documentation, go to ./src and run doxygen  
     2To create SIREN documentation, run doxygen in TOOLS/SIREN directory 
    43(http://www.stack.nl/~dimitri/doxygen/index.html version 1.8.3.1 or upper) 
    54then 
    6    open ../doc/index.html  
     5   open ./TOOLS/SIREN/doc/html/index.html in your web browser  
    76or  
    8    run ../doc/latex/gmake and open refman.pdf  
    9  
    10  
    11 templates of namelists could be find in templates directory. 
    12 read documentation for more information. 
    13  
    14  1- program to create coordinate file : 
    15  
    16    ./create_coord create_coord.nam 
    17  
    18  
    19  Variables are extracted from the input coordinates coarse grid and 
    20  interpolated to create fine coordinates files. 
    21  
    22  2- program to create bathymetry file: 
    23  
    24  ./create_bathy create_bathy.nam 
    25  
    26  Bathymetry could be extracted from fine grid Bathymetry file, or 
    27  interpolated from coarse grid Bathymetry file. 
    28  
    29  3- program to merge bathymetry file at boundaries : 
    30  
    31  ./merge_bathy merge_bathy.nam 
    32  
    33  Coarse grid Bathymetry is interpolated on fine grid. 
    34  Then fine Bathymetry and refined coarse bathymetry are merged at 
    35  boundaries. 
    36  
    37  4- program to create restart file : 
    38  
    39  ./create_restart create_restart.nam 
    40  
    41  Variables are read from restart file, or standard output. 
    42  Then theses variables are interpolated on fine grid. 
    43  Finally table are split over new decomposition. 
    44  
    45  5- program to create boundary files (OBC) : 
    46  
    47  ./create_boundary create_boundary.nam 
    48  
    49  Variables are read from standard output. 
    50  Then theses variables are interpolated on fine grid boundaries. 
     7   run ./TOOLS/SIREN/doc/latex/gmake and open ./TOOLS/SIREN/doc/latex/refman.pdf  
  • branches/2015/nemo_v3_6_STABLE/NEMOGCM/TOOLS/SIREN/src/docsrc/1_install.md

    r6392 r6467  
    2020  <b> 
    2121  - @ref index 
    22   - @ref md_docsrc_2_quickstart 
    23   - @ref md_docsrc_3_support_bug 
    24   - @ref md_docsrc_4_codingRules 
    25   - @ref md_docsrc_5_changeLog 
     22  - @ref md_src_docsrc_2_quickstart 
     23  - @ref md_src_docsrc_3_support_bug 
     24  - @ref md_src_docsrc_4_codingRules 
     25  - @ref md_src_docsrc_5_changeLog 
    2626  - @ref todo 
    2727  </b> 
  • branches/2015/nemo_v3_6_STABLE/NEMOGCM/TOOLS/SIREN/src/docsrc/2_quickstart.md

    r6392 r6467  
    3535Here after we briefly describe how to use each programs, 
    3636and so how to create your own regional configuration. 
    37 @note A set of GLORYS files (global reanalysis on *ORCA025* 
    38 grid), as well as examples of namelists are available in dods repository.<br/> 
    39 You could create and forced a first release of your own regional configuration, 
    40 with those files.  
     37@note As demonstrator for a first start a set of GLORYS files (global reanalysis on *ORCA025* grid), as well as examples of namelists are available [here](https://cloud.mercator-ocean.fr/public.php?service=files&t=877fb1b6e4f589340fc0df1ea6a53228). 
     38 
    4139<!-- ######################################################################  --> 
    4240# Create coordinates file # {#coord} 
     
    121119example: ORCA05</dd> 
    122120</dl> 
    123 @sa For more information see @ref md_docsrc_6_perio 
     121@sa For more information see @ref md_src_docsrc_6_perio 
    124122</dd> 
    125123</dl> 
     
    592590   <b> 
    593591   - @ref index 
    594    - @ref md_docsrc_1_install 
    595    - @ref md_docsrc_2_quickstart 
    596    - @ref md_docsrc_3_support_bug 
    597    - @ref md_docsrc_4_codingRules 
    598    - @ref md_docsrc_5_changeLog 
     592   - @ref md_src_docsrc_1_install 
     593   - @ref md_src_docsrc_2_quickstart 
     594   - @ref md_src_docsrc_3_support_bug 
     595   - @ref md_src_docsrc_4_codingRules 
     596   - @ref md_src_docsrc_5_changeLog 
    599597   - @ref todo 
    600598   </b> 
  • branches/2015/nemo_v3_6_STABLE/NEMOGCM/TOOLS/SIREN/src/docsrc/3_support_bug.md

    r6392 r6467  
    2020   <b> 
    2121   - @ref index 
    22    - @ref md_docsrc_1_install 
    23    - @ref md_docsrc_2_quickstart 
    24    - @ref md_docsrc_3_support_bug 
    25    - @ref md_docsrc_4_codingRules 
    26    - @ref md_docsrc_5_changeLog 
     22   - @ref md_src_docsrc_1_install 
     23   - @ref md_src_docsrc_2_quickstart 
     24   - @ref md_src_docsrc_3_support_bug 
     25   - @ref md_src_docsrc_4_codingRules 
     26   - @ref md_src_docsrc_5_changeLog 
    2727   - @ref todo 
    2828   </b> 
  • branches/2015/nemo_v3_6_STABLE/NEMOGCM/TOOLS/SIREN/src/docsrc/4_codingRules.md

    r6392 r6467  
    1515_GET_COMMAND_ARGUMENT_.<br/> 
    1616There exist no equivalent for those Fortran 03 intrinsec functions in Fortran 
    17 95.<br/> At least none convenient for compilers tested (see @ref md_docsrc_1_install).  
     1795.<br/> At least none convenient for compilers tested (see @ref md_src_docsrc_1_install).  
    1818 
    1919#  Free Form Source {#free} 
     
    9393   <b> 
    9494   - @ref index 
    95    - @ref md_docsrc_1_install 
    96    - @ref md_docsrc_2_quickstart 
    97    - @ref md_docsrc_3_support_bug 
    98    - @ref md_docsrc_5_changeLog 
     95   - @ref md_src_docsrc_1_install 
     96   - @ref md_src_docsrc_2_quickstart 
     97   - @ref md_src_docsrc_3_support_bug 
     98   - @ref md_src_docsrc_5_changeLog 
    9999   - @ref todo 
    100100   </b> 
  • branches/2015/nemo_v3_6_STABLE/NEMOGCM/TOOLS/SIREN/src/docsrc/5_changeLog.md

    r6392 r6467  
    33@tableofcontents 
    44 
    5 # Release $Revision$ 
    6 Initial release (2016-03-17) 
     5# Release 
     6Initial release (2016-04-11) 
    77 
    88## Changes 
     
    1313   <b> 
    1414   - @ref index 
    15    - @ref md_docsrc_1_install 
    16    - @ref md_docsrc_2_quickstart 
    17    - @ref md_docsrc_3_support_bug 
    18    - @ref md_docsrc_4_codingRules 
     15   - @ref md_src_docsrc_1_install 
     16   - @ref md_src_docsrc_2_quickstart 
     17   - @ref md_src_docsrc_3_support_bug 
     18   - @ref md_src_docsrc_4_codingRules 
    1919   - @ref todo 
    2020   </b> 
  • branches/2015/nemo_v3_6_STABLE/NEMOGCM/TOOLS/SIREN/src/docsrc/6_perio.md

    r6392 r6467  
    1010<dd>first and last rows are closed, whilst the first column is set to the value of the last-but-one column and the last column to the value of the second one.</dd>   
    1111@image html perio1_20.png  
    12 @image latex perio1_20.png 
     12@centered @image latex perio1_20.png  
    1313<dt>symmetric boundary condition across the equator. (in_perio=2)</dt> 
    1414<dd>last row, and first and last columns are closed. </dd>  
    1515@image html perio2_20.png  
    16 @image latex perio2_20.png 
     16@image latex perio2_20.png  
    1717<dt>North fold boundary with a T -point pivot (in_perio=3)</dt> 
    1818<dd>first row, and first and last columns are closed. </dd>  
  • branches/2015/nemo_v3_6_STABLE/NEMOGCM/TOOLS/SIREN/src/docsrc/main.dox

    r6392 r6467  
    22 @mainpage About  
    33 
    4  SIREN is a software to create regional configuration with [NEMO](http://www.nemo-ocean.eu).<br/>  
    5  Actually SIREN create input files needed for a basic NEMO configuration.<br/> 
     4 SIREN is a software to set up regional configuration with [NEMO](http://www.nemo-ocean.eu).<br/>  
     5 Actually SIREN creates the input files you need to run a NEMO regional configuration.<br/> 
     6  
     7 SIREN allows you to create your own regional configuration embedded in a wider one.<br/> 
    68 
    7  SIREN allows you to create your own regional configuration embedded in a wider one.<br/> 
    8  In order to help you, a set of GLORYS files (global reanalysis on ORCA025 grid), as well as examples 
    9  of namelists are available in dods repository. 
     9 To know how to install SIREN see @ref md_src_docsrc_1_install. 
    1010 
    11  @note This software was created, and is maintain by the Configuration Manager Working Group, composed 
    12  of NEMO system team members. 
    13   
    14  To know how to install SIREN see @ref md_docsrc_1_install. 
    15  
    16  You could find a tutorial for a quick start with SIREN in @ref md_docsrc_2_quickstart.<br/> 
     11 You could find a tutorial for a quick start with SIREN in @ref md_src_docsrc_2_quickstart.<br/> 
    1712 For more information about how to use each component of SIREN 
    1813 - see create_coord.f90 to create fine grid coordinate file 
     
    2419<HR> 
    2520   <b> 
    26    - @ref md_docsrc_1_install 
    27    - @ref md_docsrc_2_quickstart 
    28    - @ref md_docsrc_3_support_bug 
    29    - @ref md_docsrc_4_codingRules 
    30    - @ref md_docsrc_5_changeLog 
     21   - @ref md_src_docsrc_1_install 
     22   - @ref md_src_docsrc_2_quickstart 
     23   - @ref md_src_docsrc_3_support_bug 
     24   - @ref md_src_docsrc_4_codingRules 
     25   - @ref md_src_docsrc_5_changeLog 
    3126   - @ref todo 
    3227   </b> 
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