Changes between Initial Version and Version 1 of Developers/Validation/trunk_perfs/do_trunk_perfs/step_by_step

Timestamp:

2020-11-23T16:52:52+01:00 (3 years ago)

Author:

smasson

Comment:

--

Developers/Validation/trunk_perfs/do_trunk_perfs/step_by_step

@@ +1 @@
+== Change namelist_*ref ==
+
+{{{#!sh
+# change cfgs/SHARED/namelist_ref (no IO without XIOS, remove run.stat, meshmask, add timing)
+sed -e "s/nn_stock *=.*/nn_stock = -1 /" \
+    -e "s/nn_write *=.*/nn_write = -1 /" \
+    -e "s/runstat *=.*/runstat = .false. /" \
+    -e "s/ln_meshmask *=.*/ln_meshmask = .false. /" \
+    -e "s/ln_timing *=.*/ln_timing = .true. /" \
+    cfgs/SHARED/namelist_ref > tmp$$
+mv tmp$$ cfgs/SHARED/namelist_ref
+
+# change cfgs/SHARED/namelist_ice_ref (add an init file)
+sed -e "s/nn_iceini_file *=.*/nn_iceini_file = 1 /" \
+    cfgs/SHARED/namelist_ice_ref > tmp$$
+mv tmp$$ cfgs/SHARED/namelist_ice_ref
+
+# change cfgs/SHARED/namelist_pisces_ref (as in sette)
+sed -e "s/ln_varpar *=.*/ln_varpar = .false. /" \
+    -e "s/ln_pisdmp *=.*/ln_pisdmp = .false. /" \
+    cfgs/SHARED/namelist_pisces_ref > tmp$$
+mv tmp$$ cfgs/SHARED/namelist_pisces_ref
+}}}
+
+== Change ORCA2_ICE_PISCES namelist_*cfg and file_def_nemo-*.xml ==
+
+{{{#!sh
+# change namelist_cfg (suppress icebergs!!)
+ff=cfgs/ORCA2_ICE_PISCES/EXPREF/namelist_cfg
+sed -e "s/ln_icebergs *=.*/ln_icebergs = .false. /" $ff > tmp$$
+mv tmp$$ $ff
+
+# change namelist_top_cfg (as in sette)
+ff=cfgs/ORCA2_ICE_PISCES/EXPREF/namelist_top_cfg
+sed -e "s/ln_trcdta *=.*/ln_trcdta = .false. /" $ff > tmp$$
+mv tmp$$ $ff
+
+# change namelist_pisces_cfg (as in sette)
+ff=cfgs/ORCA2_ICE_PISCES/EXPREF/namelist_pisces_cfg
+sed -e "s/ln_ironsed *=.*/ln_ironsed = .false. /" \
+    -e "s/ln_ironice *=.*/ln_ironice = .false. /" \
+    -e "s/ln_hydrofe *=.*/ln_hydrofe = .false. /" \
+    $ff > tmp$$
+mv tmp$$ $ff
+
+# change file_def_nemo-oce.xml (suppress diag)
+ff=cfgs/ORCA2_ICE_PISCES/EXPREF/file_def_nemo-oce.xml
+sed -e '/file_group id="1m"/,/<\/file_group>/d' $ff > tmp$$
+mv tmp$$ $ff
+
+# change file_def_nemo-ice.xml (suppress diag)
+ff=cfgs/ORCA2_ICE_PISCES/EXPREF/file_def_nemo-ice.xml
+sed -e '/name_suffix="_SBC_scalar"/,/<\/file>/d' $ff > tmp$$
+mv tmp$$ $ff
+
+# change file_def_nemo-pisces.xml (suppress diag)
+ff=cfgs/ORCA2_ICE_PISCES/EXPREF/file_def_nemo-pisces.xml
+sed -e '/file_group id="1y"/,/<\/file_group>/d' $ff > tmp$$
+mv tmp$$ $ff
+}}}
+
+== Compile the configurations code  ==
+
+I propose to start with 
+ - ORCA2, ORCA2_ICE, ORCA2_ICE_PISCES.
+ - one run with XIOS attached (XIOSAT) and one run without XIOS (NOXIOS)
+
+There is the modules smasson uses on jean-zay [attachment:modules_jeanzay.sh] and irene [attachment:modules_irene.sh]
+
+{{{#!sh
+machine=... # for example X64_IRENE, X64_JEANZAY
+# ORCA2_ICE_PISCES
+./makenemo -m $machine -n ORCA2_ICE_PISCES_XIOSAT -r ORCA2_ICE_PISCES -j 8
+./makenemo -m $machine -n ORCA2_ICE_PISCES_NOXIOS -r ORCA2_ICE_PISCES -j 8 del_key "key_iomput"
+# ORCA2_ICE
+./makenemo -m $machine -n ORCA2_ICE_XIOSAT -r ORCA2_ICE_PISCES -j 8 del_key "key_top"
+./makenemo -m $machine -n ORCA2_ICE_NOXIOS -r ORCA2_ICE_PISCES -j 8 del_key "key_top key_iomput"
+# ORCA2
+./makenemo -m $machine -n ORCA2_XIOSAT -r ORCA2_ICE_PISCES -j 8 del_key "key_top key_si3"
+./makenemo -m $machine -n ORCA2_NOXIOS -r ORCA2_ICE_PISCES -j 8 del_key "key_top key_si3 key_iomput"
+}}}
+
+== Some cleaning...  ==
+
+{{{#!sh
+# no pisces lines in context_nemo.xml if not a PISCES directory
+for ff in $( ls -1 cfgs/ORCA2_*/EXP00/context_nemo.xml |  grep -v "_PISCES" )
+do
+    sed -e '/pisces/d' $ff > tmp$$
+    mv tmp$$ $ff
+done
+# no ice lines in context_nemo.xml if not a ICE directory
+for ff in $( ls -1 cfgs/ORCA2_*/EXP00/context_nemo.xml |  grep -v "_ICE" )
+do
+    sed -e '/ice/d' $ff > tmp$$
+    mv tmp$$ $ff
+done
+
+# optional additional cleaning...
+#
+#no pisces files if not a PISCES directory
+rm -f $( ls -1 cfgs/ORCA2_*/EXP00/*pisces* | grep -v "_PISCES" )
+#no top files if not a PISCES directory
+rm -f $( ls -1 cfgs/ORCA2_*/EXP00/*top* | grep -v "_PISCES" )
+#no ice files if not a ICE directory
+rm -f $( ls -1 cfgs/ORCA2_*/EXP00/*ice* | grep -v "_ICE" )
+}}}