Changes between Version 24 and Version 25 of Users/ReferenceConfigurations/ORCA2_LIM3_PISCES

Timestamp:

2017-04-12T21:27:02+02:00 (7 years ago)

Author:

nicolasmartin

Comment:

--

Users/ReferenceConfigurations/ORCA2_LIM3_PISCES

@@ -3 +3 @@
 Last edition: '''[[Wikinfo(changed_ts)]]''' by '''[[Wikinfo(changed_by)]]'''
 
-[[PageOutline]]
+[[PageOutline(2-3)]]
 
 == Configuration Description
@@ -13 +13 @@
 The horizontal resolution available through the standard configuration is ORCA2. it is based on a 2 degrees Mercator mesh, (i.e. variation of meridian scale factor as cosinus of the latitude). In the northern hemisphere the mesh has two poles so that the ratio of anisotropy is nearly one everywhere. The mean grid spacing is about 2/3 of the nominal value: for example it is 1.3 degrees for ORCA2. Other resolutions (ORCA4, ORCA05 and ORCA025) are running or under development within specific projects. In the coarse resolution version (i.e. ORCA2 and ORCA4) the meridional grid spacing is increased near the equator to improve the equatorial dynamics. Figures in pdf format of mesh and bathymetry can be found and downloaded here. The sea-ice model runs on the same grid.
 
-The vertical domain spreads from the surface to a depth of 5000m. There are 31 levels, with 10 levels in the top 100m. The vertical mesh is deduced from a mathematical function of z ([https://forge.ipsl.jussieu.fr/nemo/attachment//wiki/Users/ReferenceConfigurations/ORCA2_LIM3_PISCES/ORCAgrid.Madec_Imbard_1996.pdf Madec and Imbard 1996] ). The ocean surface corresponds to the w-level k=1, and the ocean bottom to the w-level k=31. The last T-level (k=31) is thus always in the ground.The depths of the vertical levels and the associated scale factors can be viewed .Higher vertical resolution is used in ORCA025 and ORCA12 ( see [https://www.drakkar-ocean.eu DRAKKAR ] project).
+The vertical domain spreads from the surface to a depth of 5000m. There are 31 levels, with 10 levels in the top 100m. The vertical mesh is deduced from a mathematical function of z ([[AttachmentNum(1)]]). The ocean surface corresponds to the w-level k=1, and the ocean bottom to the w-level k=31. The last T-level (k=31) is thus always in the ground.The depths of the vertical levels and the associated scale factors can be viewed .Higher vertical resolution is used in ORCA025 and ORCA12 ( see [https://www.drakkar-ocean.eu DRAKKAR ] project).
 
 The time step depends on the resolution. It is 1h36' for ORCA2 so that there is 15 time steps in one day.
@@ -35 +35 @@
 - coupled to TOP passive tracer transport module and [http://www.geosci-model-dev.net/8/2465/2015/ PISCES] biogeochemichal model.
 
-== AGRIF demonstrator
+=== AGRIF demonstrator
 
 From the ORCA2_LIM3_PISCES configuration, a demonstrator using AGRIF nesting can be activated. It includes the global ORCA2_LIM3_PISCES configuration and a nested grid in the Agulhas region.[[BR]]
@@ -45 +45 @@
 - Using the ORCA2_LIM3_PISCES input files and namelist, AGRIF test configuration is ready to run
 
-=== Configuration Inputs
+== Configuration Inputs
 
 '''Caution! choose the one corresponding to your code version''':
@@ -59 +59 @@
 * 3.4 [http://prodn.idris.fr/thredds/catalog/ipsl_public/reee451/NEMO/catalog.html?dataset=DatasetScanipsl_public/reee451/NEMO/ORCA2_LIM_nemo_v3.4.tar ORCA2_LIM_nemo_v3.4.tar] and [http://prodn.idris.fr/thredds/catalog/ipsl_public/reee451/NEMO/catalog.html?dataset=DatasetScanipsl_public/reee451/NEMO/INPUTS_PISCES_v3.4.tar INPUTS_PISCES_v3.4.tar]
 
-=== ON-THE-FLY Interpolation
+=== On-The-Fly Interpolation
 
 NEMO allows to use the interpolation on the fly option allowing to interpolate input data during the run. If you want to use this option you need files giving informations on weights, which have been created.[[BR]]
-You can find here 2 weights files `bil_weights` for scalar field (bilinear interpolation) and `bic_weights` for vector field (bicubic interpolation) [http://prodn.idris.fr/thredds/catalog/ipsl_public/reee512/ORCA2_ONTHEFLY/WEIGHTS/catalog.html Weights ] files.[[BR]]
+You can find [http://prodn.idris.fr/thredds/catalog/ipsl_public/reee512/ORCA2_ONTHEFLY/WEIGHTS/catalog.html here] 2 weights files `bil_weights` for scalar field (bilinear interpolation) and `bic_weights` for vector field (bicubic interpolation).[[BR]]
 The data files used are [http://data1.gdfl.noaa.gov/nomads/forms/mom4/COREv2 COREII forcing] extrapolated on continents, ready to be used for on the fly option: [http://prodn.idris.fr/thredds/catalog/ipsl_public/reee512/ORCA2_ONTHEFLY/FILLED_FILES/catalog.html COREII ] forcing files extrapolated on continents[[BR]]
 
-=== Configuration Outputs
+== Configuration Outputs
 
 To compare with your experiments, Outputs and Restarts files are available for ORCA2_LIM3_PISCES and its previous versions ORCA2_LIM2, for different releases:
 
-==== v3_6 STABLE r5618
+=== v3_6 STABLE r5618
 
-To download this version:
-{{{
+- To checkout this version
+{{{#!sh
 svn --username "mylogin" co -r 5618 http://forge.ipsl.jussieu.fr/nemo/svn/branches/2015/nemo_v3_6_STABLE/NEMOGCM
 }}}
-   -Climatological reference (3000 years) :[[BR]]
-       -download [http://prodn.idris.fr/thredds/catalog/ipsl_public/rgzi002/ORCA2_LIM3_PISCES/OR2L3P-V1/catalog.html output], [http://prodn.idris.fr/thredds/catalog/ipsl_public/rgzi002/ORCA2_LIM3_PISCES/OR2L3P-V1/RESTART/catalog.html restart] files from the DODS server of IDRIS [[BR]]
-       -list of cpp keys : 
+- Climatological reference (3000 years)
+  - [http://prodn.idris.fr/thredds/catalog/ipsl_public/rgzi002/ORCA2_LIM3_PISCES/OR2L3P-V1/catalog.html output], [http://prodn.idris.fr/thredds/catalog/ipsl_public/rgzi002/ORCA2_LIM3_PISCES/OR2L3P-V1/RESTART/catalog.html restart] files
+  - list of CPP keys
 {{{
-bld::tool:: fppkeys key_trabbl key_lim3 key_vvl key_dynspg_ts key_diaeiv key_ldfslp key_traldf_c2d key_traldf_eiv key_dynldf_c3d 
-key_zdftke key_zdfddm key_zdftmx key_iomput key_mpp_mpi key_top key_pisces
+bld::tool:: fppkeys key_trabbl key_lim3 key_vvl key_dynspg_ts key_diaeiv key_ldfslp key_traldf_c2d key_traldf_eiv key_dynldf_c3d key_zdftke key_zdfddm key_zdftmx key_iomput key_mpp_mpi key_top key_pisces
 }}}
-       -forcing COREII  [[BR]] 
-       -all details (plots, time series, namelist, namelist_ice, iodef.xml file and cpp keys) of run of reference are available from the [http://prodn.idris.fr/thredds/catalog/ipsl_public/rgzi002/ORCA2_LIM3_PISCES/OR2L3P-V1/NAMELISTS/catalog.html here]
+  - forcing COREII
+  - all details (plots, time series, namelists, XML files and CPP keys) of run of reference are available from the [http://prodn.idris.fr/thredds/catalog/ipsl_public/rgzi002/ORCA2_LIM3_PISCES/OR2L3P-V1/NAMELISTS/catalog.html here]
 
-==== Preliminary version of v3_6 r4334
-To download this version:
-{{{
+=== Preliminary version of v3_6 r4334
+
+- To checkout this version
+{{{#!sh
 svn --username "mylogin" co -r 4334 http://forge.ipsl.jussieu.fr/nemo/svn/branches/2013/dev_MERGE_2013/NEMOGCM
 }}}
-    -Climatological reference (500 years) :[[BR]] 
-        -download [http://prodn.idris.fr/thredds/catalog/ipsl_public/romr009/reference_trunk_v36_Output/catalog.html output], [http://prodn.idris.fr/thredds/catalog/ipsl_public/romr009/reference_trunk_v36_Restart/catalog.html restart] files from the DODS server[[BR]] 
-        -list of cpp keys :        
+- Climatological reference (500 years)
+  - [http://prodn.idris.fr/thredds/catalog/ipsl_public/romr009/reference_trunk_v36_Output/catalog.html output], [http://prodn.idris.fr/thredds/catalog/ipsl_public/romr009/reference_trunk_v36_Restart/catalog.html restart] files
+  - list of CPP keys
 {{{
 bld::tool::fppkeys key_trabbl key_lim2 key_dynspg_flt key_diaeiv key_ldfslp key_traldf_c2d key_traldf_eiv key_dynldf_c3d 
 key_zdftke key_zdfddm key_zdftmx key_top key_pisces key_iomput key_mpp_mpi key_nosignedzero
 }}}
-        -forcing COREII  [[BR]] 
-        -all details (plots, time series, namelist, namelist_ice, iodef.xml file and cpp keys) of run of reference are available from the [http://prodn.idris.fr/thredds/catalog/ipsl_public/romr009/reference_trunk_v36/catalog.html here]
+  - forcing COREII
+  - all details (plots, time series, namelists, XML files and CPP keys) of run of reference are available from the [http://prodn.idris.fr/thredds/catalog/ipsl_public/romr009/reference_trunk_v36/catalog.html here]
 
-==== For developers only :( intermediate v3_5) r3856
+=== For developers only :( intermediate v3_5) r3856
 
-    -Climatological reference (500 years) :[[BR]] 
-        -download [http://prodn.idris.fr/thredds/catalog/ipsl_public/rfry154/reference_trunk_v35_Output/catalog.html output], [http://prodn.idris.fr/thredds/catalog/ipsl_public/rfry154/reference_trunk_v35_Restart/catalog.html restart] files from the DODS server[[BR]]
-        -list of cpp keys :         
+- Climatological reference (500 years) :[[BR]] 
+  - [http://prodn.idris.fr/thredds/catalog/ipsl_public/rfry154/reference_trunk_v35_Output/catalog.html output], [http://prodn.idris.fr/thredds/catalog/ipsl_public/rfry154/reference_trunk_v35_Restart/catalog.html restart] files
+  - list of cpp keys
 {{{
 bld::tool::fppkeys fppkeys key_trabbl key_orca_r2 key_lim2 key_dynspg_flt key_diaeiv key_ldfslp key_traldf_c2d key_traldf_eiv key_dynldf_c3d 
 key_zdftke key_zdfddm key_zdftmx key_top key_pisces key_iomput key_mpp_mpi
 }}}
-        -forcing COREII  [[BR]] 
-        -all details (plots, time series, namelist, namelist_ice, iodef.xml file and cpp keys) of run of reference are available from the [http://prodn.idris.fr/thredds/catalog/ipsl_public/romr009/reference_trunk_v35/catalog.html here]
+  - forcing COREII
+  - all details (plots, time series, namelists, XML files and CPP keys) of run of reference are available from the [http://prodn.idris.fr/thredds/catalog/ipsl_public/romr009/reference_trunk_v35/catalog.html here]
 
-==== nemo 3_4_STABLE r4636
+=== nemo 3_4_STABLE r4636
 
-To download this version:
-{{{
+- To download this version:
+{{{#!sh
 svn --username "mylogin" co -r 4636 http://forge.ipsl.jussieu.fr/nemo/svn/branches/2012/dev_v3_4_STABLE_2012
 }}}
-    -Climatological reference (300 years) :[[BR]] 
-        download [http://prodn.idris.fr/thredds/catalog/ipsl_public/reee451/reference_trunk_v34_Output/catalog.html output],[http://prodn.idris.fr/thredds/catalog/ipsl_public/reee451/reference_trunk_v34_Restart/catalog.html restart] files from the DODS server[[BR]] 
-        -list of cpp keys :           
+- Climatological reference (300 years) :[[BR]] 
+  - [http://prodn.idris.fr/thredds/catalog/ipsl_public/reee451/reference_trunk_v34_Output/catalog.html output],[http://prodn.idris.fr/thredds/catalog/ipsl_public/reee451/reference_trunk_v34_Restart/catalog.html restart] files
+  - list of CPP keys :           
 {{{
-bld::tool::fppkeys fppkeys key_trabbl key_orca_r2 key_lim2 key_dynspg_flt key_diaeiv key_ldfslp key_traldf_c2d key_traldf_eiv key_dynldf_c3d 
-key_zdftke key_zdfddm key_top key_pisces key_iomput key_mpp_mpi
+bld::tool::fppkeys fppkeys key_trabbl key_orca_r2 key_lim2 key_dynspg_flt key_diaeiv key_ldfslp key_traldf_c2d key_traldf_eiv key_dynldf_c3d key_zdftke key_zdfddm key_top key_pisces key_iomput key_mpp_mpi
 }}}
-        -forcing COREII[[BR]] 
-        -all details (plots, time series, namelist, namelist_ice, iodef.xml file and cpp keys) of run of reference are available from the [http://prodn.idris.fr/thredds/catalog/ipsl_public/romr009/reference_dev_v34_stable/catalog.html here]
+  - forcing COREII
+  - all details (plots, time series, namelists, XML files and CPP keys) of run of reference are available from the [http://prodn.idris.fr/thredds/catalog/ipsl_public/romr009/reference_dev_v34_stable/catalog.html here]