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Users/SetupNewConfiguration/AGRIF-nesting-tool (diff) – NEMO

Changes between Version 8 and Version 9 of Users/SetupNewConfiguration/AGRIF-nesting-tool


Ignore:
Timestamp:
2017-03-10T12:15:23+01:00 (7 years ago)
Author:
cbricaud
Comment:

--

Legend:

Unmodified
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  • Users/SetupNewConfiguration/AGRIF-nesting-tool

    v8 v9  
    136136 
    137137 
     138== 3. Running the model== 
     139=Input data : = 
     140data needed to run with OPA are of two types : the namelists and the forcing files (already created thanks to nesting tools). Concerning namelists one need to provide one namelist by grid, the naming convention is the same than the one for forcing files.[[BR]] 
     141 
     142 
     143{{{ 
     144#elisha 
     145 
     146 
     147cp namelist 1_namelist 
     148cp namelist_ice 1_namelist_ice  (if LIM is included in the configuration) 
     149vi 1_namelist 
     150 
     151}}} 
     152 
     153Then user should edit those namelists in order to modify the number and the duration of time steps in order that those number match the coarse grid values, taking into account refinement in time. Some other coefficients linked with the horizontal resolution of the grid can be tuned (mostly concerning diffusion and viscosity) indeed each grid has his own set of coefficients.  
     154 
     155|| ||   Coarse Grid'namelist' || Fine Grid '1_namelist' 
     156||nitend||      52500   || 157500 || 
     157||rdt||         1800    || 600 || 
     158 
     159 
     160''Most important namelist variables to edit. Example for a 1:3 time refinement ratio''[[BR]] 
     161 
     162User has now to gather in a directory every forcing files, namelists as well as opa executable and AGRIF_FixedGrids.in file. The simulation is ready to be carried out.[[BR]] 
     163 
     164When using online interpolation, the forcing part of 1_namelist will look like (here with core forcing):[[BR]] 
     165 
     166 
     167     
     168{{{ 
     169!----------------------------------------------------------------------- 
     170    &namsbc_core ! namsbc_core CORE bulk formulea 
     171    !----------------------------------------------------------------------- 
     172    ! ! file name ! frequency (hours) ! variable ! time interpol. ! clim ! 'yearly' or ! weights ! rotation ! 
     173    ! ! ! (if <0 months) ! name ! (logical) ! (T/F) ! 'monthly' ! filename ! pairing ! 
     174    sn_wndi = 'u10_core' , -1. , 'u10' , .true. , .true. , 'yearly' ,'bicubic_weights.nc' , '' 
     175    sn_wndj = 'v10_core' , -1. , 'v10' , .true. , .true. , 'yearly' ,'bicubic_weights.nc' , '' 
     176    sn_qsr = 'qsw_core' , -1. , 'swdn' , .true. , .true. , 'yearly' ,'bilinear_weights.nc', '' 
     177    sn_qlw = 'qlw_core' , -1. , 'lwdn' , .true. , .true. , 'yearly' ,'bilinear_weights.nc', '' 
     178    sn_tair = 't2_core' , -1. , 't2' , .true. , .true. , 'yearly' ,'bilinear_weights.nc', '' 
     179    sn_humi = 'q2_core' , -1. , 'q2' , .true. , .true. , 'yearly' ,'bilinear_weights.nc', '' 
     180    sn_prec = 'precip_core' , -1. , 'precip' , .true. , .true. , 'yearly' ,'bilinear_weights.nc', '' 
     181    sn_snow = 'snow_core' , -1. , 'snow' , .true. , .true. , 'yearly' ,'bilinear_weights.nc', '' 
     182}}} 
     183 
     184 
     185And we need only a weight file called 1_bicubic_weights.nc in the running directory, while core forcing files corresponds to the coarse grid input files.[[BR]] 
     186 
     187 
     188=Output data :=  
     189output files are NetCDF or DIMG (key_dimgout activated) files giving the diagnostics at points T,U,V,W of the Arakawa C grid. For fine grids output files, the naming convention is exactly the same than the one mentioned above namely a different prefix for each grid of the hierarchy. The output files contain the both ghostcells, mentioned before, at the boundaries, so depending the visualization tool used, user can have the value zero at the boundaries of child grids. Note that the text file called ocean.ouput containing all the information printed during the run is also created for fine grids. 
     190 
     191==Development Team== 
     192 
     193 
     194||Organization  ||Name  ||Developments  ||contact|| 
     195||LMC/IMAG,Grenoble     ||Laurent Debreu        ||MPI implementation,Numerical implementation,2 way grid nesting ||     Laurent.Debreu@imag.fr|| 
     196||LMC/IMAG,Grenoble     ||Cyril Mazauric        ||Installation environment,Portability on various platforms,Test of performance,Computation issues||    Cyril.Mazauric@imag.fr|| 
     197||LMC/IMAG,Grenoble     ||Florian Lemarié       ||Nesting tools,New AGRIF interpolation schemes (PPM/ENO),Numerical issues      ||Florian.Lemarie@imag.fr|| 
     198 
     199==Support== 
     200 
     201??? 
     202 
     203 
     204==Known Users== 
     205 
     206||Organization  ||Name  ||Region of interest    ||configuration|| 
     207||LEGI Grenoble FRANCE  ||Jean-Marc Molines     ||Gulf of Mexico        ||NATL3/NATL4|| 
     208||CICESE Ensenada MEXICO        ||Julio Scheinbob,Julio Candela, Julien Jouanno||       Gulf of Mexico ||       NATL3|| 
     209||DFO St Johns CANADA   ||Andry Ratsimandresy,Fraser Davidson   ||Newfoundland, Labrador sea||  NOOFS based on ORCA025|| 
     210||LPO Brest     ||Virginie Thierry||    Bay of Biscay||         NATL4|| 
     211||NOCS Southampton      ||Steve Alderson        ||||||            
     212||IFM-GEOMAR Kiel       ||Arne Biastoch ||      South Africa || ORCA025|| 
     213||Mercator OCean || Jerome Chanut || North Atlantic || CREG025, CREG12 || 
     214 
     215 
     216==References :== 
    138217  
    139  
     218  -[http://www-ljk.imag.fr/MOISE/AGRIF/ AGRIF ] web page - (Laurent Debreu, LMC-IMAG) 
     219 
     220  -Nesting Tool:[[BR]] 
     221 
     222 
     223    [http://www.croco-ocean.org/ CROCO] Matlab Toolbox - (Pierrick Penven, Patrick Marchesiello - IRD) 
     224    [http://oceans11.lanl.gov/trac/SCRIP SCRIP ] package - (Los Alamos National Laboratory) 
     225 
     226 
     227