Changes between Version 40 and Version 41 of user/flavoni/libIGCM_v3.6

Timestamp:

2015-10-28T16:01:04+01:00 (9 years ago)

Author:

flavoni

Comment:

--

user/flavoni/libIGCM_v3.6

@@ -40 +40 @@
  ./model NEMO_v6
 }}}
-  
-  **  verify NEMOGCM revision in '''        modipsl/util/mod.def '''        file:  (fixed revision of NEMO: '''        5618'''        )
-
-  #-H- NEMO_v6  NEMOGCM for CMIP6 exercise [[BR]]       #-H- NEMO_v6  libIGCM tag libIGCM_v2.6[[BR]]       #-M- NEMO_v6  Christian.Ethe@ipsl.jussieu.fr[[BR]]       #-C- NEMO_v6  tags/libIGCM_v2.7                                                                      HEAD  10     libIGCM                        .   [[BR]]       #-C- NEMO_v6  '''       branches/2015/nemo_v3_6_STABLE/NEMOGCM'''                                   '''       5618'''           7           .                       modeles[[BR]]       #-C- NEMO_v6  trunk/ORCA1_LIM3_PISCES                                                                HEAD  17             .              modeles/NEMOGCM/CONFIG[[BR]]       #-C- NEMO_v6  CONFIG/UNIFORM/v6/NEMO_v6                                                   HEAD    8     NEMO_v6                 config
+  **  verify NEMOGCM revision in '''         modipsl/util/mod.def '''         file:  (fixed revision of NEMO: '''         5618'''         )
+
+  #-H- NEMO_v6  NEMOGCM for CMIP6 exercise [[BR]]        #-H- NEMO_v6  libIGCM tag libIGCM_v2.6[[BR]]        #-M- NEMO_v6  Christian.Ethe@ipsl.jussieu.fr[[BR]]        #-C- NEMO_v6  tags/libIGCM_v2.7                                                                      HEAD  10     libIGCM                        .   [[BR]]        #-C- NEMO_v6  '''        branches/2015/nemo_v3_6_STABLE/NEMOGCM'''                                    '''        5618'''            7           .                       modeles[[BR]]        #-C- NEMO_v6  trunk/ORCA1_LIM3_PISCES                                                                HEAD  17             .              modeles/NEMOGCM/CONFIG[[BR]]        #-C- NEMO_v6  CONFIG/UNIFORM/v6/NEMO_v6                                                   HEAD    8     NEMO_v6                 config
 
 (The OFFICIAL repository for the CONFIG '''ORCA1_LIM3_PISCES''' is the web site '''shaconemo''': https://forge.ipsl.jussieu.fr/shaconemo/wiki/README_ORCA1_LIM3_PISCES )
 
-  '''       NOTA BENE'''        : ORA1_LIM3_PISCES configuration is by default (in libIGCM) run with xios_server en detached mode --> so you need to download and compile xios:
+  '''        NOTA BENE'''         : ORA1_LIM3_PISCES configuration is by default (in libIGCM) run with xios_server en detached mode --> so you need to download and compile xios:
 
  * Download XIOS ('''branch 1.0 revision 703''')
 
-  (The documentation of xios is available here: http://forge.ipsl.jussieu.fr/ioserver/wiki/documentation        )
+  (The documentation of xios is available here: http://forge.ipsl.jussieu.fr/ioserver/wiki/documentation         )
 
  * Compile XIOS (on ADA machine):
@@ -63 +62 @@
 
 }}}
- 
-* Edit NEMOGCM/CONFIG/'''cfg.txt''' file, and add the following line: 
+ * Edit NEMOGCM/CONFIG/'''cfg.txt''' file, and add the following line:
 
 {{{
 ORCA1_LIM3_PISCES OPA_SRC LIM_SRC_3 NST_SRC TOP_SRC
 }}}
-
  * Compile ORCA1_LIM3_PISCES configuration  (Using ./makenemo -h to see help ( to see list of compilers availables, to see options,...))
 
@@ -88 +85 @@
 
 }}}
+  '''NOTA: YOU CAN WANT TO USE MORE THAN ONE EXECUTABLE''':
+  so you can do, for example,
+{{{
+ln -s ../modeles/NEMOGCM/CONFIG/ORCA1_LIM3_PISCES/BLD/bin/nemo.exe nemo_orca1_lim3_pisces.exe
+}}}
+  JUST BECAREFUL to use '''SAME''' executable '''name''' in config.card
+
  * This is the structure of config in modipsl:
- 
+
 {{{
  modipsl/config/NEMO_v6/
@@ -125 +129 @@
                                                opa9.card
 }}}
-
  * To create submission directory you have to copy config.card file in config/NEMO-v6 directory:
 
@@ -132 +135 @@
  cp EXPERIMENTS/ORCA1_LIM3_PISCES/clim/config.card . 
 }}}
-
- * Editing at this point modipsl/config/NEMO_v6/config.card   (according to iodef.xml file)'''
+ * Editing at this point modipsl/config/NEMO_v6/config.card   (according to iodef.xml file)
 
 {{{
@@ -140 +142 @@
 
 }}}
-  
  * Create Job :
 
@@ -153 +154 @@
 
 }}}
-* '''LOOK AT alla parameters of the Job you've created ''':
+ * '''LOOK AT alla parameters of the Job you've created ''':
+
 By default is 1h, but for ORCA1-LIM3-PISCES is 1:45 for 1 year
+
 {{{
 vi modipsl/config/NEMO_v6/EXP00/Job_EXP00
  # @ wall_clock_limit = 1:00:00
 }}}
-
 '''SPECIAL INFORMATIONS FOR RUN ORCA2-LIM3-PISCES'''
 
-ORCA2-LIM3-PISCES does not exists between reference configurations in v3_6_STABLE NEMOGCM/CONFIGURATION
-so you've to:
-
-* Create configuration ORCA2_LIM3_PISCES without compile it (with -j0):
- 
+ORCA2-LIM3-PISCES does not exists between reference configurations in v3_6_STABLE NEMOGCM/CONFIGURATION so you've to:
+
+ * Create configuration ORCA2_LIM3_PISCES without compile it (with -j0):
+
 {{{
 ./makenemo -n ORCA2_LIM3_PISCES -r ORCA2_LIM_PISCES -j0
 }}}
-
-* Edit cfg.txt file by changing ORCA2_LIM3_PISCES definition :
- 
+ * Edit cfg.txt file by changing ORCA2_LIM3_PISCES definition :
+
 {{{
 vi cfg.txt 
 ORCA2_LIM3_PISCES OPA_SRC '''LIM_SRC_3''' NST_SRC TOP_SRC
 }}}
-
-* Clean the configuration ORCA2_LIM3_PISCES just created :
- 
+ * Clean the configuration ORCA2_LIM3_PISCES just created :
+
 {{{
 ./makenemo -n ORCA2_LIM3_PISCES clean
 }}}
-
-* Change cpp keys:
- 
+ * Change cpp keys:
+
 {{{
 vi ORCA2_LIM3_PISCES/cpp_ORCA2_LIM3_PISCES.fcm 
 bld::tool::fppkeys key_trabbl '''key_lim3''' key_dynspg_flt key_diaeiv key_ldfslp key_traldf_c2d key_traldf_eiv key_dynldf_c3d key_zdftke key_zdfddm key_zdftmx key_top key_pisces key_iomput key_mpp_mpi
 }}}
-
-* And finally compile the ORCA2_LIM3_PISCES configuration :
- 
+ * And finally compile the ORCA2_LIM3_PISCES configuration :
+
 {{{
 ./makenemo -n ORCA2_LIM3_PISCES -j 8 -m X64_ADA
 }}}
-
- 
-######## OLD VERSION
+ ######## OLD VERSION
 
 you can chek:
+
  * Editing at this point modipsl/config/NEMO_v6/EXPERIMENTS/ORCA1_LIM3_PISCES/clim/COMP/'''xios.card'''
  * Editing at this point modipsl/config/NEMO_v6/EXPERIMENTS/ORCA1_LIM3_PISCES/clim/COMP/'''opa9.card'''
@@ -206 +202 @@
  * Editing at this point modipsl/config/NEMO_v6/EXPERIMENTS/ORCA1_LIM3_PISCES/clim/COMP/'''pisces.card'''
 
-
 see : [https://forge.ipsl.jussieu.fr/nemo/wiki/libIGCM/setupsimupage setupsimupage]