[8] | 1 | #!/bin/ksh |
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| 2 | |
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| 3 | # $Date: 2010/06/25 18:48:26 $ |
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| 4 | # $Author: ssipsl $ |
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| 5 | # $Revision: 1.5 $ |
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| 6 | # IPSL (2006) |
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| 7 | # This software is governed by the CeCILL licence see ORCHIDEE/ORCHIDEE_CeCILL.LIC |
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| 8 | |
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| 9 | #D--------------------------------------------------------------------== |
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| 10 | #D--------------------------------------------------------------------== |
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| 11 | #D- |
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| 12 | #D- Job to launch FLUXNET spinup simulations |
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| 13 | #D- |
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| 14 | #D--------------------------------------------------------------------== |
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| 15 | #D--------------------------------------------------------------------== |
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| 16 | #D- |
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| 17 | # Job inspired from Sönke Zaehle "site_new.def" job |
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| 18 | # ################################################# |
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| 19 | |
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| 20 | |
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| 21 | |
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| 22 | MODIPSL=::modipsl:: |
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| 23 | libIGCM=${MODIPSL}/libIGCM |
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| 24 | |
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| 25 | # All SubJobs in SPINUP in ONE OR MORE YEARS run (must be used with libIGCM branches/AllPostFred). |
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| 26 | |
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| 27 | |
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| 28 | |
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| 29 | #D--------------------------------------------------------------------== |
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| 30 | #D- -1. User modification place |
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| 31 | #D--------------------------------------------------------------------== |
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| 32 | |
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| 33 | #D- Increased verbosity (1, 2, 3) |
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| 34 | #Verbosity=3 |
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| 35 | |
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| 36 | #D- |
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| 37 | # -------------------------------------------------------------------- |
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| 38 | #D- ! Optionnal features /!\ Use with care ! |
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| 39 | # -------------------------------------------------------------------- |
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| 40 | |
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| 41 | #D- Low level debug : to bypass lib test checks and stack construction |
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| 42 | #D- Default=true |
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| 43 | DEBUG_debug=false |
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| 44 | |
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| 45 | #D- Set DEBUG_sys to false to disable output calls of function |
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| 46 | #D- Default=true |
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| 47 | #DEBUG_sys=false |
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| 48 | |
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| 49 | #D- Turn in dry run mode ? (0,1,2,3) |
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| 50 | #D- Default=0 |
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| 51 | #DRYRUN=3 |
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| 52 | # YOU MUST COMPILE YOUR EXE FILES FOR DRYRUN MODE ! |
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| 53 | # ------------------------------------------------------------------------------------- |
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| 54 | # | DRYRUN= | Date computations, | sys_Get | Exe | sys_Put_Out; sys_Put_Rest | |
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| 55 | # | | Cp/Exe param files | | Chmod | | |
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| 56 | # | | Qsub | | | | |
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| 57 | # ------------------------------------------------------------------------------------- |
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| 58 | # | 0 | yes | yes | yes | yes | |
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| 59 | # ------------------------------------------------------------------------------------- |
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| 60 | # | 1 | yes | yes | yes | no | |
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| 61 | # ------------------------------------------------------------------------------------- |
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| 62 | # | 2 | yes | yes | no | no | |
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| 63 | # ------------------------------------------------------------------------------------- |
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| 64 | # | 3 | yes | no | no | no | |
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| 65 | # ------------------------------------------------------------------------------------- |
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| 66 | |
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| 67 | |
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| 68 | #D- |
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| 69 | #D--------------------------------------------------------------------== |
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| 70 | #D- 0. System Environment |
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| 71 | #D- - Define variables for Number of processors |
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| 72 | #D- - Define MPI variables |
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| 73 | #D- - Define batch scheduler variables |
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| 74 | #D- - Source IGCM Library |
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| 75 | #D- - Get RESOLution in .resol file (temporary) |
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| 76 | #D--------------------------------------------------------------------== |
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| 77 | |
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| 78 | #D--------------------------------------------------------------------== |
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| 79 | |
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| 80 | . ${libIGCM}/libIGCM_debug/libIGCM_debug.ksh |
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| 81 | ( ${DEBUG_debug} ) && IGCM_debug_Check |
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| 82 | . ${libIGCM}/libIGCM_card/libIGCM_card.ksh |
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| 83 | ( ${DEBUG_debug} ) && IGCM_card_Check |
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| 84 | . ${libIGCM}/libIGCM_date/libIGCM_date.ksh |
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| 85 | ( ${DEBUG_debug} ) && IGCM_date_Check |
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| 86 | #------- |
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| 87 | . ${libIGCM}/libIGCM_sys/libIGCM_sys.ksh |
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| 88 | |
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| 89 | #set -vx |
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| 90 | R_BC=${R_IN}/BC |
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| 91 | |
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| 92 | . ${SUBMIT_DIR}/fluxnet.ksh |
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| 93 | |
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| 94 | FLUXNET_initialize |
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| 95 | |
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| 96 | |
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| 97 | # Launch ATLAS syncho : we have to wait for the last job ! |
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| 98 | |
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| 99 | # ATLAS fix parameters : |
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| 100 | # Atlas Name : |
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| 101 | AtlasCfg=${fluxnet_SPINUP_AtlasCfg} |
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| 102 | #atlas_FLUXNET.cfg |
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| 103 | |
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| 104 | # observation_file |
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| 105 | observation_file_path=${fluxnet_SPINUP_observation_file_path} |
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| 106 | |
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| 107 | # old history file |
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| 108 | reference_file_path=${fluxnet_SPINUP_reference_file_path} |
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| 109 | |
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| 110 | # Modulo for SpinUp years |
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| 111 | Modulo=${fluxnet_SPINUP_Modulo} |
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| 112 | |
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| 113 | ATLAS_ARGS="${AtlasCfg} ${observation_file_path} ${reference_file_path} ${Modulo}" |
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| 114 | |
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| 115 | isite=1 |
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| 116 | index=0 |
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| 117 | while [ ${isite} -le ${NumSites} ] ; do |
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| 118 | |
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| 119 | site=${fluxnet_FLUXNET_Sites[$index]} |
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| 120 | echo $site |
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| 121 | |
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| 122 | # We test if the END step was moved in SpinUp/SPIN/Output directory. |
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| 123 | # Then we are sure the last historical SpinUp step has finished (HIST)... |
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| 124 | |
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| 125 | # Define name of the END SubJob (FIN) in SpinUp |
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| 126 | if [ ${fluxnet_SPINUP_duree_final} -gt 0 ] ; then |
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| 127 | BeforeLastJob=${site}${config_UserChoices_JobName}FIN |
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| 128 | else |
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| 129 | echo "We must have an \"duree_final\" non zero to get historical run and post-treatment" |
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| 130 | exit 1 |
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| 131 | fi |
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| 132 | |
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| 133 | # Wait for the end of the last job : |
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| 134 | ((isleep=0)) |
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| 135 | while [ ! -d ${R_OUT}/${config_UserChoices_TagName}/${site}${config_UserChoices_JobName}/SPIN/Output/${BeforeLastJob} ] ; do |
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| 136 | ls -la ${R_OUT}/${config_UserChoices_TagName}/${site}${config_UserChoices_JobName}/SPIN/Output/${BeforeLastJob} |
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| 137 | sleep 20 |
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| 138 | ((isleep=isleep+1)) |
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| 139 | if [ isleep -gt 200 ] ; then |
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| 140 | break ; |
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| 141 | fi |
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| 142 | done |
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| 143 | |
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| 144 | TIME_YEAR=${fluxnet_FLUXNET_Sites[ $(( index + ColumnLength )) ]} |
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| 145 | YEAR=${fluxnet_FLUXNET_Sites[ $(( index + ColumnYear )) ]} |
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| 146 | |
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| 147 | # Launch post-treatment for SPINUP ! |
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| 148 | echo "****" |
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| 149 | echo "Launch post-treatment for SPINUP for site ${site} !" |
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| 150 | nohup ${SUBMIT_DIR}/post_FLUXNET ${MODIPSL} ${site} ${TIME_YEAR} ${YEAR} ${ATLAS_ARGS} > ${SUBMIT_DIR}/out_post_${site} 2>&1 & |
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| 151 | echo "****" |
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| 152 | |
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| 153 | (( isite=isite+1 )) |
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| 154 | (( index=index+NumInfosBySite )) |
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| 155 | done |
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| 156 | |
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| 157 | IGCM_sys_RmRunDir -Rf ${RUN_DIR_PATH} |
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