Changes between Version 38 and Version 39 of DevelopmentActivities/ORCHIDEE-CNP/howtoSPINAL

Timestamp:

2017-04-06T10:07:59+02:00 (7 years ago)

Author:

dgoll

Comment:

--

DevelopmentActivities/ORCHIDEE-CNP/howtoSPINAL

@@ -24 +24 @@
 (/home/surface3/common/CNP_files/revXX/soils_param.nc, .), \
 (/home/surface3/common/CNP_files/revXX/soils_param_usda_new.nc.nc, .), \
-}}}
-
+(/home/surface3/common/CNP_files/deposition/deposition_1850.nc,  deposition.nc), \
+}}}
+
+REMARK: Although the file with N deposition is used in sechiba we must add the file to the stomate.card. 
+This is needed to ensure it is copied when we restart from a simulation with impose_cn. In that case, the N deposition variable will not be present in the sechiba_restart_out.nc but the libIGCM assumes all sechiba variables are present.
+
+WARNING (obelix): The double entry of deposition will cause a stop on obelix, as the "cp" option are set to not overwrite files.
+The issue is not solved yet; but I asked Fabienne & Josefine how the cp option in libIGCM can be changed, so that you can overwrite files - or an alternative solution.)
 
 == You want account for inter-annual variability of deposition ? ==
@@ -31 +37 @@
 {{{
 List=       (${R_IN}/SRF/routing.nc, .),     \
-(/home/surface3/common/CNP_files/rev01/soils_param.nc, .), \
+(/home/surface3/common/CNP_files/revXX/soils_param.nc, .), \
 (/home/surface3/common/CNP_files/revXX/soils_param_usda_new.nc.nc, .), \
             (${R_IN}/SRF/cartepente2d_15min.nc, .), \
@@ -43 +49 @@
 {{{
 ListNonDel= (${R_IN}/SRF/reftemp.nc, .),\
-(/home/surface3/common/CNP_files/rev00/lithology.nc, .), \
+(/home/surface3/common/CNP_files/revXX/lithology.nc, .), \
 (/home/users/dgoll/ORC_data/N_deposition/LMDzINCA_DEP_2000.nc, .), \
-(/home/surface3/common/CNP_files/rev00/deposition_${CyclicYear}.nc, .)
-}}}
-
-REMARK: Although the file with N deposition is used in sechiba we add the file to the stomate.card. 
-This is needed to ensure it is copied when we restart from a simulation with impose_cn. In that case, the N deposition variable will not be present in the sechiba_restart_out.nc but the libIGCM assumes all sechiba variables are present.
-
-WARNING: The double entry of deposition will cause a stop on obelix, as the "cp" option are set to not overwrite files (issue not solved yet; please ask Fabienne or Josefine how the cp option in libIGCM can be changed, so that you can overwrite files)
+(/home/surface3/common/CNP_files/revXX/deposition_${CyclicYear}.nc, .)
+}}}
+
+
 
 == 1.3 adjust the libIGCM  ==