[5799] | 1 | ## (Super)Computer configuration template |
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[8826] | 2 | ##-------------------------------------------------------------------------------- |
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[5283] | 3 | |
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[8826] | 4 | ## Copy/Rename it and fill in according to your environment. |
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[5286] | 5 | |
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[8826] | 6 | ## Rules for completion: |
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| 7 | ##o Undefined variables (XXX= ) are mandatory |
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| 8 | ##o Empty variables (XXX='') are optional, default value |
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[5286] | 9 | |
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[8826] | 10 | ## Look into other configuration file for examples. |
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| 11 | |
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| 12 | ## Most of the settings can be changed "on-the-fly" from the console to avoid |
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| 13 | ##+ the creation of several configuration files. |
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| 14 | ##+ See `./trusting.sh -h` |
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| 15 | |
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| 16 | ##-------------------------------------------------------------------------------- |
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| 17 | |
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| 18 | |
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[5799] | 19 | ## Default settings |
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[5788] | 20 | ##--------------------------------------------------- |
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[8818] | 21 | # (Super)Computer environment (${TRUST_IO_XIOS} is already defined in the user configuration file) |
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[8826] | 22 | TRUST_JOB_ENV='' |
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| 23 | ${TRUST_IO_XIOS}/arch/arch-${TRUST_MAIN_HPCC} |
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[8808] | 24 | ## If `module` is available, ${TRUST_JOB_ENV}.env will be sourced |
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| 25 | ## If not (scheduled jobs), it will be ${TRUST_JOB_ENV}.path or finally ${TRUST_JOB_ENV} |
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[5283] | 26 | |
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[5929] | 27 | ## Comparison command with restart files as argument (think to append $PATH by any way) |
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[8808] | 28 | ='cdo diffn' |
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[5283] | 29 | |
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[8826] | 30 | TRUST_COMPILE_NPROC= ## Number of compiling processes |
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| 31 | TRUST_JOB_TIMEOUT= ## Timeout for computation (s) |
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[5761] | 32 | |
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| 33 | |
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[5929] | 34 | ## (Super)computer environment |
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[5799] | 35 | ##--------------------------------------------------- |
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[8808] | 36 | ## Job commands will almost always be used with `eval ${TRUST_JOB_XXX}` because |
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[5929] | 37 | ## they will certainly need job ID number as argument for working |
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[8808] | 38 | TRUST_JOB_SCRIPT= ## Submission script contained ./batch folder, will be copied to testing folder |
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| 39 | TRUST_JOB_SUBMIT= ## Submit a job and get his ID on the fly (assigned to ${TRUST_JOB_ID}) |
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| 40 | ## ex: `llsubmit ${TRUST_JOB_SCRIPT} | grep -oe '\<[0-9]*\>'` |
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| 41 | TRUST_JOB_STATE= ## Test state of the submitted job (true -> pending/running or false -> completed/crashed) |
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| 42 | ## ex: "llq | grep \${TRUST_JOB_ID}" |
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| 43 | TRUST_JOB_KILL= ## Kill the submitted job |
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| 44 | ## ex: "llcancel \${TRUST_JOB_ID}" |
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[5799] | 45 | |
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[5929] | 46 | ## Computational performances of job (respectively elapsed time, max physical & virtual memory) |
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[8808] | 47 | TRUST_JOB_TIME='' ## ex: "grep IdrisMemMPI NEMO_CI_\${TRUST_JOB_ID} | cut -d, -f1 | awk '{print \$(NF-1),\$NF}" |
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| 48 | TRUST_JOB_RAM_P='' ## ex: "grep IdrisMemMPI NEMO_CI_\${TRUST_JOB_ID} | cut -d, -f3 | awk '{print \$3 ,\$4 }" |
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| 49 | TRUST_JOB_RAM_V='' ## ex: "grep IdrisMemMPI NEMO_CI_\${TRUST_JOB_ID} | cut -d, -f2 | awk '{print \$3 ,\$4 }" |
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[5799] | 50 | |
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[8808] | 51 | TRUST_JOB_INFO='' ## Get job informations to fill in a logfile during computation |
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| 52 | ## ex: "llq -x \${TRUST_JOB_ID}" |
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[5799] | 53 | |
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[8808] | 54 | ## Compiler (use with `${TRUST_COMPILE_FORTRAN} --version`) |
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| 55 | TRUST_COMPILE_FORTRAN='' ## ex: 'ifort'|'gfortran'|'pgfortran'|... |
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[5799] | 56 | |
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[5929] | 57 | ## Software/libraries (string pattern to match just before the release number in $PATH) |
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| 58 | ## Respectively CDO (Climate Data Operators) / MPI libraries / NetCDF libraries |
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[8818] | 59 | TRUST_IO_CDO='' ## ex: 'cdo/'|'netcdf-utils-' |
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[8808] | 60 | TRUST_COMPILE_MPI='' ## ex: 'intel/impi/'|'bullxmpi/' |
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| 61 | TRUST_COMPILE_NETCDF='' ## ex: 'netcdf/'|'netcdf-' |
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