[3443] | 1 | MODULE p4zlys |
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| 2 | !!====================================================================== |
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| 3 | !! *** MODULE p4zlys *** |
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| 4 | !! TOP : PISCES |
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| 5 | !!====================================================================== |
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| 6 | !! History : - ! 1988-07 (E. MAIER-REIMER) Original code |
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| 7 | !! - ! 1998 (O. Aumont) additions |
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| 8 | !! - ! 1999 (C. Le Quere) modifications |
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| 9 | !! 1.0 ! 2004 (O. Aumont) modifications |
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| 10 | !! 2.0 ! 2007-12 (C. Ethe, G. Madec) F90 |
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| 11 | !! ! 2011-02 (J. Simeon, J. Orr) Calcon salinity dependence |
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| 12 | !! 3.4 ! 2011-06 (O. Aumont, C. Ethe) Improvment of calcite dissolution |
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| 13 | !!---------------------------------------------------------------------- |
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| 14 | #if defined key_pisces |
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| 15 | !!---------------------------------------------------------------------- |
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| 16 | !! 'key_pisces' PISCES bio-model |
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| 17 | !!---------------------------------------------------------------------- |
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| 18 | !! p4z_lys : Compute the CaCO3 dissolution |
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| 19 | !! p4z_lys_init : Read the namelist parameters |
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| 20 | !!---------------------------------------------------------------------- |
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| 21 | USE oce_trc ! shared variables between ocean and passive tracers |
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| 22 | USE trc ! passive tracers common variables |
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| 23 | USE sms_pisces ! PISCES Source Minus Sink variables |
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| 24 | USE prtctl_trc ! print control for debugging |
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| 25 | USE iom ! I/O manager |
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| 26 | |
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| 27 | IMPLICIT NONE |
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| 28 | PRIVATE |
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| 29 | |
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| 30 | PUBLIC p4z_lys ! called in trcsms_pisces.F90 |
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| 31 | PUBLIC p4z_lys_init ! called in trcsms_pisces.F90 |
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| 32 | |
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| 33 | !! * Shared module variables |
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[4147] | 34 | REAL(wp), PUBLIC :: kdca !: diss. rate constant calcite |
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| 35 | REAL(wp), PUBLIC :: nca !: order of reaction for calcite dissolution |
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[3443] | 36 | |
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| 37 | !! * Module variables |
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| 38 | REAL(wp) :: calcon = 1.03E-2 !: mean calcite concentration [Ca2+] in sea water [mole/kg solution] |
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| 39 | |
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| 40 | INTEGER :: rmtss !: number of seconds per month |
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| 41 | |
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| 42 | !!---------------------------------------------------------------------- |
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| 43 | !! NEMO/TOP 3.3 , NEMO Consortium (2010) |
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| 44 | !! $Id: p4zlys.F90 3321 2012-03-05 17:10:55Z cetlod $ |
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| 45 | !! Software governed by the CeCILL licence (NEMOGCM/NEMO_CeCILL.txt) |
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| 46 | !!---------------------------------------------------------------------- |
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| 47 | |
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| 48 | CONTAINS |
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| 49 | |
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[5385] | 50 | SUBROUTINE p4z_lys( kt, knt ) |
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[3443] | 51 | !!--------------------------------------------------------------------- |
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| 52 | !! *** ROUTINE p4z_lys *** |
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| 53 | !! |
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| 54 | !! ** Purpose : CALCULATES DEGREE OF CACO3 SATURATION IN THE WATER |
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| 55 | !! COLUMN, DISSOLUTION/PRECIPITATION OF CACO3 AND LOSS |
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| 56 | !! OF CACO3 TO THE CACO3 SEDIMENT POOL. |
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| 57 | !! |
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| 58 | !! ** Method : - ??? |
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| 59 | !!--------------------------------------------------------------------- |
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| 60 | ! |
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[5385] | 61 | INTEGER, INTENT(in) :: kt, knt ! ocean time step |
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[3443] | 62 | INTEGER :: ji, jj, jk, jn |
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| 63 | REAL(wp) :: zalk, zdic, zph, zah2 |
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| 64 | REAL(wp) :: zdispot, zfact, zcalcon, zalka, zaldi |
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| 65 | REAL(wp) :: zomegaca, zexcess, zexcess0 |
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| 66 | CHARACTER (len=25) :: charout |
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[6943] | 67 | REAL(wp), POINTER, DIMENSION(:,:,:) :: zco3, zco3sat, zcaldiss |
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[3443] | 68 | !!--------------------------------------------------------------------- |
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| 69 | ! |
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| 70 | IF( nn_timing == 1 ) CALL timing_start('p4z_lys') |
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| 71 | ! |
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[6943] | 72 | CALL wrk_alloc( jpi, jpj, jpk, zco3, zco3sat, zcaldiss ) |
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[3443] | 73 | ! |
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| 74 | zco3 (:,:,:) = 0. |
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| 75 | zcaldiss(:,:,:) = 0. |
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| 76 | ! ------------------------------------------- |
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| 77 | ! COMPUTE [CO3--] and [H+] CONCENTRATIONS |
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| 78 | ! ------------------------------------------- |
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| 79 | |
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| 80 | DO jn = 1, 5 ! BEGIN OF ITERATION |
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| 81 | ! |
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| 82 | !CDIR NOVERRCHK |
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| 83 | DO jk = 1, jpkm1 |
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| 84 | !CDIR NOVERRCHK |
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| 85 | DO jj = 1, jpj |
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| 86 | !CDIR NOVERRCHK |
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| 87 | DO ji = 1, jpi |
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| 88 | zfact = rhop(ji,jj,jk) / 1000. + rtrn |
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| 89 | zph = hi(ji,jj,jk) * tmask(ji,jj,jk) / zfact + ( 1.-tmask(ji,jj,jk) ) * 1.e-9 ! [H+] |
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[5385] | 90 | zdic = trb(ji,jj,jk,jpdic) / zfact |
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| 91 | zalka = trb(ji,jj,jk,jptal) / zfact |
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[3443] | 92 | ! CALCULATE [ALK]([CO3--], [HCO3-]) |
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[6287] | 93 | zalk = zalka - ( akw3(ji,jj,jk) / zph - zph / ( aphscale(ji,jj,jk) + rtrn ) & |
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| 94 | & + borat(ji,jj,jk) / ( 1. + zph / akb3(ji,jj,jk) ) ) |
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[3443] | 95 | ! CALCULATE [H+] and [CO3--] |
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| 96 | zaldi = zdic - zalk |
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| 97 | zah2 = SQRT( zaldi * zaldi + 4.* ( zalk * ak23(ji,jj,jk) / ak13(ji,jj,jk) ) * ( zdic + zaldi ) ) |
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| 98 | zah2 = 0.5 * ak13(ji,jj,jk) / zalk * ( zaldi + zah2 ) |
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| 99 | ! |
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| 100 | zco3(ji,jj,jk) = zalk / ( 2. + zah2 / ak23(ji,jj,jk) ) * zfact |
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| 101 | hi(ji,jj,jk) = zah2 * zfact |
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| 102 | END DO |
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| 103 | END DO |
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| 104 | END DO |
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| 105 | ! |
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| 106 | END DO |
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| 107 | |
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| 108 | ! --------------------------------------------------------- |
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| 109 | ! CALCULATE DEGREE OF CACO3 SATURATION AND CORRESPONDING |
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| 110 | ! DISSOLOUTION AND PRECIPITATION OF CACO3 (BE AWARE OF |
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| 111 | ! MGCO3) |
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| 112 | ! --------------------------------------------------------- |
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| 113 | |
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| 114 | DO jk = 1, jpkm1 |
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| 115 | DO jj = 1, jpj |
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| 116 | DO ji = 1, jpi |
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| 117 | |
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| 118 | ! DEVIATION OF [CO3--] FROM SATURATION VALUE |
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| 119 | ! Salinity dependance in zomegaca and divide by rhop/1000 to have good units |
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| 120 | zcalcon = calcon * ( tsn(ji,jj,jk,jp_sal) / 35._wp ) |
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| 121 | zfact = rhop(ji,jj,jk) / 1000._wp |
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[6943] | 122 | zomegaca = ( zcalcon * zco3(ji,jj,jk) ) / ( aksp(ji,jj,jk) * zfact + rtrn ) |
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| 123 | zco3sat(ji,jj,jk) = aksp(ji,jj,jk) * zfact / ( zcalcon + rtrn ) |
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[3443] | 124 | |
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| 125 | ! SET DEGREE OF UNDER-/SUPERSATURATION |
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| 126 | excess(ji,jj,jk) = 1._wp - zomegaca |
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| 127 | zexcess0 = MAX( 0., excess(ji,jj,jk) ) |
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| 128 | zexcess = zexcess0**nca |
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| 129 | |
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| 130 | ! AMOUNT CACO3 (12C) THAT RE-ENTERS SOLUTION |
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| 131 | ! (ACCORDING TO THIS FORMULATION ALSO SOME PARTICULATE |
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| 132 | ! CACO3 GETS DISSOLVED EVEN IN THE CASE OF OVERSATURATION) |
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[5385] | 133 | zdispot = kdca * zexcess * trb(ji,jj,jk,jpcal) |
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[3443] | 134 | # if defined key_degrad |
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| 135 | zdispot = zdispot * facvol(ji,jj,jk) |
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| 136 | # endif |
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| 137 | ! CHANGE OF [CO3--] , [ALK], PARTICULATE [CACO3], |
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| 138 | ! AND [SUM(CO2)] DUE TO CACO3 DISSOLUTION/PRECIPITATION |
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[5385] | 139 | zcaldiss(ji,jj,jk) = zdispot * rfact2 / rmtss ! calcite dissolution |
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| 140 | zco3(ji,jj,jk) = zco3(ji,jj,jk) + zcaldiss(ji,jj,jk) |
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[3443] | 141 | ! |
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| 142 | tra(ji,jj,jk,jptal) = tra(ji,jj,jk,jptal) + 2. * zcaldiss(ji,jj,jk) |
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| 143 | tra(ji,jj,jk,jpcal) = tra(ji,jj,jk,jpcal) - zcaldiss(ji,jj,jk) |
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| 144 | tra(ji,jj,jk,jpdic) = tra(ji,jj,jk,jpdic) + zcaldiss(ji,jj,jk) |
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| 145 | END DO |
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| 146 | END DO |
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| 147 | END DO |
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| 148 | ! |
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[4996] | 149 | |
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[5385] | 150 | IF( lk_iomput .AND. knt == nrdttrc ) THEN |
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[4996] | 151 | IF( iom_use( "PH" ) ) CALL iom_put( "PH" , -1. * LOG10( hi(:,:,:) ) * tmask(:,:,:) ) |
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[6943] | 152 | IF( iom_use( "CO3" ) ) CALL iom_put( "CO3" , zco3(:,:,:) * 1.e+3 * tmask(:,:,:) ) |
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| 153 | IF( iom_use( "CO3sat" ) ) CALL iom_put( "CO3sat", zco3sat(:,:,:) * 1.e+3 * tmask(:,:,:) ) |
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| 154 | IF( iom_use( "DCAL" ) ) CALL iom_put( "DCAL" , zcaldiss(:,:,:) * 1.e+3 * rfact2r * tmask(:,:,:) ) |
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[4996] | 155 | ELSE |
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[6204] | 156 | IF( ln_diatrc ) THEN |
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| 157 | trc3d(:,:,:,jp_pcs0_3d ) = -1. * LOG10( hi(:,:,:) ) * tmask(:,:,:) |
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| 158 | trc3d(:,:,:,jp_pcs0_3d + 1) = zco3(:,:,:) * tmask(:,:,:) |
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[6943] | 159 | trc3d(:,:,:,jp_pcs0_3d + 2) = zco3sat(:,:,:) * tmask(:,:,:) |
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[6204] | 160 | ENDIF |
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[3443] | 161 | ENDIF |
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| 162 | ! |
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| 163 | IF(ln_ctl) THEN ! print mean trends (used for debugging) |
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| 164 | WRITE(charout, FMT="('lys ')") |
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| 165 | CALL prt_ctl_trc_info(charout) |
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| 166 | CALL prt_ctl_trc(tab4d=tra, mask=tmask, clinfo=ctrcnm) |
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| 167 | ENDIF |
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| 168 | ! |
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[6943] | 169 | CALL wrk_dealloc( jpi, jpj, jpk, zco3, zco3sat, zcaldiss ) |
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[3443] | 170 | ! |
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| 171 | IF( nn_timing == 1 ) CALL timing_stop('p4z_lys') |
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| 172 | ! |
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| 173 | END SUBROUTINE p4z_lys |
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| 174 | |
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| 175 | SUBROUTINE p4z_lys_init |
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| 176 | |
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| 177 | !!---------------------------------------------------------------------- |
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| 178 | !! *** ROUTINE p4z_lys_init *** |
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| 179 | !! |
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| 180 | !! ** Purpose : Initialization of CaCO3 dissolution parameters |
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| 181 | !! |
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| 182 | !! ** Method : Read the nampiscal namelist and check the parameters |
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| 183 | !! called at the first timestep (nittrc000) |
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| 184 | !! |
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| 185 | !! ** input : Namelist nampiscal |
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| 186 | !! |
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| 187 | !!---------------------------------------------------------------------- |
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| 188 | INTEGER :: ji, jj, jk |
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[4147] | 189 | INTEGER :: ios ! Local integer output status for namelist read |
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[3443] | 190 | REAL(wp) :: zcaralk, zbicarb, zco3 |
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| 191 | REAL(wp) :: ztmas, ztmas1 |
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| 192 | |
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| 193 | NAMELIST/nampiscal/ kdca, nca |
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| 194 | !!---------------------------------------------------------------------- |
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| 195 | |
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[4147] | 196 | REWIND( numnatp_ref ) ! Namelist nampiscal in reference namelist : Pisces CaCO3 dissolution |
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| 197 | READ ( numnatp_ref, nampiscal, IOSTAT = ios, ERR = 901) |
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| 198 | 901 IF( ios /= 0 ) CALL ctl_nam ( ios , 'nampiscal in reference namelist', lwp ) |
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[3443] | 199 | |
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[4147] | 200 | REWIND( numnatp_cfg ) ! Namelist nampiscal in configuration namelist : Pisces CaCO3 dissolution |
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| 201 | READ ( numnatp_cfg, nampiscal, IOSTAT = ios, ERR = 902 ) |
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| 202 | 902 IF( ios /= 0 ) CALL ctl_nam ( ios , 'nampiscal in configuration namelist', lwp ) |
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[4624] | 203 | IF(lwm) WRITE ( numonp, nampiscal ) |
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[4147] | 204 | |
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[3443] | 205 | IF(lwp) THEN ! control print |
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| 206 | WRITE(numout,*) ' ' |
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| 207 | WRITE(numout,*) ' Namelist parameters for CaCO3 dissolution, nampiscal' |
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| 208 | WRITE(numout,*) ' ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~' |
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| 209 | WRITE(numout,*) ' diss. rate constant calcite (per month) kdca =', kdca |
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| 210 | WRITE(numout,*) ' order of reaction for calcite dissolution nca =', nca |
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| 211 | ENDIF |
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| 212 | |
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| 213 | ! Number of seconds per month |
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| 214 | rmtss = nyear_len(1) * rday / raamo |
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| 215 | ! |
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| 216 | END SUBROUTINE p4z_lys_init |
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| 217 | |
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| 218 | #else |
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| 219 | !!====================================================================== |
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| 220 | !! Dummy module : No PISCES bio-model |
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| 221 | !!====================================================================== |
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| 222 | CONTAINS |
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| 223 | SUBROUTINE p4z_lys( kt ) ! Empty routine |
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| 224 | INTEGER, INTENT( in ) :: kt |
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| 225 | WRITE(*,*) 'p4z_lys: You should not have seen this print! error?', kt |
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| 226 | END SUBROUTINE p4z_lys |
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| 227 | #endif |
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| 228 | !!====================================================================== |
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[6204] | 229 | END MODULE p4zlys |
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