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sette.sh in branches/2017/dev_r7881_ENHANCE09_RK3/NEMOGCM/SETTE – NEMO

source: branches/2017/dev_r7881_ENHANCE09_RK3/NEMOGCM/SETTE/sette.sh @ 8735

Last change on this file since 8735 was 8735, checked in by flavoni, 6 years ago

remove internal wave-induced mixing parametrisation, in agrif tests, ... because files 1_power.... needed
  • Property svn:executable set to *
File size: 55.8 KB
RevLine 
[3520]1#!/bin/bash
[3708]2############################################################
[3520]3# Author : Simona Flavoni for NEMO
[4245]4# Contact: sflod@locean-ipsl.upmc.fr
5# 2013   : A.C. Coward added options for testing with XIOS in dettached mode
[3520]6#
7# sette.sh   : principal script of SET TEsts for NEMO (SETTE)
8# ----------------------------------------------------------------------
9# NEMO/SETTE , NEMO Consortium (2010)
10# Software governed by the CeCILL licence     (NEMOGCM/NEMO_CeCILL.txt)
11# ----------------------------------------------------------------------
12#
13#############################################################
[7744]14#set -vx
[3520]15set -o posix
16#set -u
17#set -e
[4245]18# ===========
[3520]19# DESCRIPTION
20# ===========
21#
22# Variables to be checked by user:
23#
[4245]24# COMPILER          : name of compiler as defined in NEMOGCM/ARCH directory
25# BATCH_COMMAND_PAR :  name of the command for submitting parallel batch jobs
26# BATCH_COMMAND_SEQ :  name of the command for submitting sequential batch jobs 
27# INTERACT_FLAG     : flag to run in interactive mode "yes"
28#                           to run in batch mode "no"
29# MPIRUN_FLAG       : flag to run in parallel (MPI) "yes"
30#                           to run in sequential mode (NB_PROC = 1) "no"
31# USING_XIOS        : flag to control the activation of key_iomput
32#                      "yes" to compile using key_iomput and link to the external XIOS library
33#                      "no"  to compile without key_iomput and link to the old IOIPSL library
34# USING_MPMD        : flag to control the use of stand-alone IO servers
35#                     requires USING_XIOS="yes"
36#                      "yes" to run in MPMD (detached) mode with stand-alone IO servers
37#                      "no"  to run in SPMD (attached) mode without separate IO servers
38# NUM_XIOSERVERS    : number of stand-alone IO servers to employ
39#                     set to zero if USING_MPMD="no"
[3520]40#
41# Principal script is sette.sh, that calls
42#
[4245]43#  makenemo  : to create successive exectuables in ${CONFIG_NAME}/BLD/bin/nemo.exe
44#              and links to opa in ${CONFIG_NAME}/EXP00)
[3520]45#
46#  param.cfg : sets and loads following directories:
47#
[4245]48#   FORCING_DIR         : is the directory for forcing files (tarfile)
49#   INPUT_DIR           : is the directory for input files storing
50#   TMPDIR              : is the temporary directory (if needed)
[3520]51#   NEMO_VALIDATION_DIR : is the validation directory
52#
53#   (NOTE: this file is the same for all configrations to be tested with sette)
54#
[4245]55#   all_functions.sh : loads functions used by sette (note: new functions can be added here)
56#   set_namelist     : function declared in all_functions that sets namelist parameters
57#   post_test_tidyup : creates validation storage directory and copies required output files
[8367]58#                      (run.stat and ocean.output) in it after execution of test.
[3520]59#
[4245]60#  VALIDATION tree is:
[3520]61#
62#   NEMO_VALIDATION_DIR/WCONFIG_NAME/WCOMPILER_NAME/TEST_NAME/REVISION_NUMBER(or DATE)
63#
64#  prepare_exe_dir.sh : defines and creates directory where the test is executed
[4245]65#                       execution directory takes name of TEST_NAME defined for every test
66#                       in sette.sh. (each test in executed in its own directory)
[3520]67#
[4245]68#  prepare_job.sh     : to generate the script run_job.sh
[3520]69#
[4245]70#  fcm_job.sh         : run in batch (INTERACT_FLAG="no") or interactive (INTERACT_FLAG="yes")
71#                        see sette.sh and BATCH_TEMPLATE directory
[3520]72#
[4245]73#  NOTE: jobs requiring initial or forcing data need to have an input_CONFIG.cfg in which
74#        can be found paths to the input tar file)
75#  NOTE: if job is not launched for any reason you have the executable ready in ${EXE_DIR}
76#        directory
77#  NOTE: the changed namelists are left in ${EXE_DIR} directory whereas original namelists
78#        remain in ${NEW_CONF}/EXP00
[3520]79#
[4245]80#  NOTE: a log file, output.sette, is created in ${SETTE_DIR} with the echoes of
81#        executed commands
[3520]82#
[4245]83#  NOTE: if sette.sh is stopped in output.sette there is written the last command
84#        executed by sette.sh
[3520]85#
[4245]86# example use: ./sette.sh
87#########################################################################################
[3520]88#
[4245]89# Compiler among those in NEMOGCM/ARCH
[7743]90COMPILER=X64_ADA
91
[5398]92export BATCH_COMMAND_PAR="llsubmit"
[4245]93export BATCH_COMMAND_SEQ=$BATCH_COMMAND_PAR
[4990]94export INTERACT_FLAG="no"
[4245]95export MPIRUN_FLAG="yes"
96export USING_XIOS="yes"
[3520]97#
[4245]98export DEL_KEYS="key_iomput"
99if [ ${USING_XIOS} == "yes" ] 
100 then
101   export DEL_KEYS=""
102fi
[3520]103#
[4245]104# Settings which control the use of stand alone servers (only relevant if using xios)
[3520]105#
[4245]106export USING_MPMD="no"
107export NUM_XIOSERVERS=4
108export JOB_PREFIX=batch-mpmd
[3520]109#
[4245]110if [ ${USING_MPMD} == "no" ] 
111 then
112   export NUM_XIOSERVERS=0
113   export JOB_PREFIX=batch
114fi
[3520]115#
116#
[4245]117if [ ${USING_MPMD} == "yes" ] && [ ${USING_XIOS} == "no"]
118 then
119   echo "Incompatible choices. MPMD mode requires the XIOS server"
120   exit
121fi
[3520]122
123# Directory to run the tests
124SETTE_DIR=$(cd $(dirname "$0"); pwd)
[6460]125MAIN_DIR=$(dirname $SETTE_DIR)
[7715]126CONFIG_DIR0=${MAIN_DIR}/CONFIG
[3520]127TOOLS_DIR=${MAIN_DIR}/TOOLS
128COMPIL_DIR=${TOOLS_DIR}/COMPILE
129
130CMP_NAM=${1:-$COMPILER}
131# Copy job_batch_COMPILER file for specific compiler into job_batch_template
132cd ${SETTE_DIR}
[4245]133cp BATCH_TEMPLATE/${JOB_PREFIX}-${COMPILER} job_batch_template || exit
[4316]134# Description of configuration tested:
[7715]135# GYRE_PISCES       :  1 &  2
136# ORCA2_LIM3_PISCES :  3 &  4
137# ORCA2_OFF_PISCES  :  5 &  6
138# AMM12             :  7 &  8
[8367]139# SAS               :  9     fos SAS there is no run.stat so is useless to test REPRO
[7715]140# ISOMIP            : 10 & 11
141# ORCA2_LIM3_OBS    : 12
142# ORCA2_AGRIF_LIM3  : 13 & 14
143#                     15 & 16
[4147]144
[8735]145###for config in 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16
146for config in 13 15 16
[5836]147
[3520]148do
149
[7715]150# TESTS FOR GYRE_PISCES CONFIGURATION
[3520]151if [ ${config} -eq 1 ] ;  then
[7715]152    ## Restartability tests for GYRE_PISCES
[3520]153    export TEST_NAME="LONG"
[7715]154    cd ${CONFIG_DIR0}
155    . ./makenemo -m ${CMP_NAM} -n GYREPIS_LONG -r GYRE_PISCES -j 8 del_key ${DEL_KEYS}
[3520]156    cd ${SETTE_DIR}
[4252]157    . ./param.cfg
158    . ./all_functions.sh
159    . ./prepare_exe_dir.sh
[3520]160    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]161    NPROC=32
[4245]162    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[4147]163    cd ${EXE_DIR} 
[7715]164    set_namelist namelist_cfg cn_exp \"GYREPIS_LONG\"
[4147]165    set_namelist namelist_cfg nn_it000 1
166    set_namelist namelist_cfg nn_itend 120
167    set_namelist namelist_cfg nn_stock 60
168    set_namelist namelist_cfg ln_clobber .true.
[7646]169    set_namelist namelist_cfg ln_linssh .true.
170    set_namelist namelist_cfg ln_read_cfg .false.
[4318]171    set_namelist namelist_cfg nn_fwb 0
[7646]172    set_namelist namelist_cfg jpni 4
173    set_namelist namelist_cfg jpnj 8
174    set_namelist namelist_cfg jpnij 32
[4245]175    if [ ${USING_MPMD} == "yes" ] ; then
176       set_xio_using_server iodef.xml true
177    else
178       set_xio_using_server iodef.xml false
179    fi
180    cd ${SETTE_DIR}
[7753]181    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]182
183    cd ${SETTE_DIR}
184    export TEST_NAME="SHORT"
[4252]185    . ./prepare_exe_dir.sh
[3520]186    cd ${EXE_DIR}
[7715]187    set_namelist namelist_cfg cn_exp \"GYREPIS_SHORT\"
[4147]188    set_namelist namelist_cfg nn_it000 61
189    set_namelist namelist_cfg nn_itend 120
190    set_namelist namelist_cfg nn_stock 60
191    set_namelist namelist_cfg ln_rstart .true.
192    set_namelist namelist_cfg nn_rstctl 2
193    set_namelist namelist_cfg ln_clobber .true.
[7646]194    set_namelist namelist_cfg ln_linssh .true.
195    set_namelist namelist_cfg ln_read_cfg .false.
[4316]196    set_namelist namelist_cfg nn_fwb 0
[7646]197    set_namelist namelist_cfg jpni 4
198    set_namelist namelist_cfg jpnj 8
199    set_namelist namelist_cfg jpnij 32
[7744]200    set_namelist namelist_top_cfg ln_rsttr .true.
201    set_namelist namelist_top_cfg nn_rsttr 2
[7715]202    set_namelist namelist_cfg cn_ocerst_in \"GYREPIS_LONG_00000060_restart\"
[7744]203    set_namelist namelist_top_cfg cn_trcrst_in \"GYREPIS_LONG_00000060_restart_trc\"
[4245]204    if [ ${USING_MPMD} == "yes" ] ; then
205       set_xio_using_server iodef.xml true
206    else
207       set_xio_using_server iodef.xml false
208    fi
[3537]209    for (( i=1; i<=$NPROC; i++)) ; do
210        L_NPROC=$(( $i - 1 ))
211        L_NPROC=`printf "%04d\n" ${L_NPROC}`
[7715]212        ln -sf ../LONG/GYREPIS_LONG_00000060_restart_${L_NPROC}.nc .
[7744]213        ln -sf ../LONG/GYREPIS_LONG_00000060_restart_trc_${L_NPROC}.nc .
[3537]214    done
[4245]215    if [ ${USING_MPMD} == "yes" ] ; then
216       set_xio_using_server iodef.xml true
217    else
218       set_xio_using_server iodef.xml false
219    fi
[3520]220    cd ${SETTE_DIR}
[7753]221    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]222    cd ${SETTE_DIR}
[3532]223    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]224fi
225
226if [ ${config} -eq 2 ] ;  then
[7715]227    ## Reproducibility tests for GYRE_PISCES
[7646]228    export TEST_NAME="REPRO_4_8"
[7715]229    cd ${CONFIG_DIR0}
230    . ./makenemo -m ${CMP_NAM} -n GYREPIS_32 -r GYRE_PISCES -j 8 del_key ${DEL_KEYS}
[3520]231    cd ${SETTE_DIR}
[4252]232    . ./param.cfg
233    . ./all_functions.sh
234    . ./prepare_exe_dir.sh
[3520]235    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]236    NPROC=32
[4245]237    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]238    cd ${EXE_DIR}
[7715]239    set_namelist namelist_cfg cn_exp \"GYREPIS_48\"
[4147]240    set_namelist namelist_cfg nn_it000 1
241    set_namelist namelist_cfg nn_itend 60
242    set_namelist namelist_cfg nn_fwb 0
243    set_namelist namelist_cfg ln_ctl .false.
244    set_namelist namelist_cfg ln_clobber .true.
[7646]245    set_namelist namelist_cfg ln_linssh .true.
246    set_namelist namelist_cfg ln_read_cfg .false.
247    set_namelist namelist_cfg jpni 4
248    set_namelist namelist_cfg jpnj 8
249    set_namelist namelist_cfg jpnij 32
[4245]250    if [ ${USING_MPMD} == "yes" ] ; then
251       set_xio_using_server iodef.xml true
252    else
253       set_xio_using_server iodef.xml false
254    fi
[3520]255    cd ${SETTE_DIR}
[7753]256    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]257    cd ${SETTE_DIR}
258    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
259
260    cd ${SETTE_DIR}
[7646]261    export TEST_NAME="REPRO_8_4"
[4252]262    . ./prepare_exe_dir.sh
[3680]263    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]264    NPROC=32
[4245]265    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]266    cd ${EXE_DIR}
[7715]267    set_namelist namelist_cfg cn_exp \"GYREPIS_84\"
[4147]268    set_namelist namelist_cfg nn_it000 1
269    set_namelist namelist_cfg nn_itend 60
270    set_namelist namelist_cfg nn_fwb 0
271    set_namelist namelist_cfg ln_ctl .false.
272    set_namelist namelist_cfg ln_clobber .true.
[7646]273    set_namelist namelist_cfg ln_linssh .true.
274    set_namelist namelist_cfg ln_read_cfg .false.
275    set_namelist namelist_cfg jpni 8
276    set_namelist namelist_cfg jpnj 4
277    set_namelist namelist_cfg jpnij 32
[4245]278    if [ ${USING_MPMD} == "yes" ] ; then
279       set_xio_using_server iodef.xml true
280    else
281       set_xio_using_server iodef.xml false
282    fi
[3520]283    cd ${SETTE_DIR}
[7753]284    . ./prepare_job.sh input_GYRE.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]285    cd ${SETTE_DIR}
286    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3532]287
[3520]288fi
289
[7715]290# TESTS FOR ORCA2_LIM3_PISCES CONFIGURATION
[3520]291if [ ${config} -eq 3 ] ;  then
[7646]292    ## Restartability tests for ORCA2_LIM3_PISCES
293    export TEST_NAME="LONG"
[7715]294    cd ${CONFIG_DIR0}
[7646]295    . ./makenemo -m ${CMP_NAM} -n ORCA2LIM3PIS_LONG -r ORCA2_LIM3_PISCES -j 8 del_key ${DEL_KEYS}
296    cd ${SETTE_DIR}
297    . ./param.cfg
298    . ./all_functions.sh
299    . ./prepare_exe_dir.sh
300    JOB_FILE=${EXE_DIR}/run_job.sh
301    NPROC=32
302    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
303    cd ${EXE_DIR}
304    set_namelist namelist_cfg cn_exp \"O2L3P_LONG\"
305    set_namelist namelist_cfg nn_it000 1
306    set_namelist namelist_cfg nn_itend 150
307    set_namelist namelist_cfg nn_stock 75
308    set_namelist namelist_cfg ln_clobber .true.
309    set_namelist namelist_cfg ln_read_cfg .true.
310    set_namelist namelist_cfg ln_linssh .false.
311    set_namelist namelist_cfg nn_fwb 0
312    set_namelist namelist_cfg jpni 4
313    set_namelist namelist_cfg jpnj 8
314    set_namelist namelist_cfg jpnij 32
[8586]315    set_namelist namelist_ice_cfg ln_icediachk .true.
316##    set_namelist namelist_ice_cfg ln_icediahsb .true.
[4147]317    set_namelist namelist_top_cfg ln_trcdta .false.
[3520]318    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
319    # if not you need input files, and for tests is not necessary
[4147]320    set_namelist namelist_pisces_cfg ln_presatm .false.
321    set_namelist namelist_pisces_cfg ln_varpar .false.
322    set_namelist namelist_pisces_cfg ln_dust .false.
323    set_namelist namelist_pisces_cfg ln_solub .false.
324    set_namelist namelist_pisces_cfg ln_river .false.
325    set_namelist namelist_pisces_cfg ln_ndepo .false.
326    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]327    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]328    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[4245]329    if [ ${USING_MPMD} == "yes" ] ; then
330       set_xio_using_server iodef.xml true
331    else
332       set_xio_using_server iodef.xml false
333    fi
[3520]334    cd ${SETTE_DIR}
[7753]335    . ./prepare_job.sh input_ORCA2_LIM3_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3532]336   
337    cd ${SETTE_DIR}
[3520]338    export TEST_NAME="SHORT"
[4252]339    . ./prepare_exe_dir.sh
[3520]340    cd ${EXE_DIR}
[7646]341    set_namelist namelist_cfg cn_exp \"O2L3P_SHORT\"
[4147]342    set_namelist namelist_cfg nn_it000 76
343    set_namelist namelist_cfg nn_itend 150
344    set_namelist namelist_cfg nn_stock 75
345    set_namelist namelist_cfg ln_rstart .true.
346    set_namelist namelist_cfg nn_rstctl 2
347    set_namelist namelist_cfg ln_clobber .true.
[7646]348    set_namelist namelist_cfg ln_read_cfg .true.
349    set_namelist namelist_cfg ln_linssh .false.
[7715]350    set_namelist namelist_cfg ln_icebergs .true.
[4316]351    set_namelist namelist_cfg nn_fwb 0
[7646]352    set_namelist namelist_cfg jpni 4
353    set_namelist namelist_cfg jpnj 8
354    set_namelist namelist_cfg jpnij 32
[8586]355    set_namelist namelist_ice_cfg ln_icediachk .true.
356##    set_namelist namelist_ice_cfg ln_icediahsb .true.
[4147]357    set_namelist namelist_top_cfg ln_rsttr .true.
358    set_namelist namelist_top_cfg nn_rsttr 2
[7646]359    set_namelist namelist_cfg cn_ocerst_in \"O2L3P_LONG_00000075_restart\"
360    set_namelist namelist_ice_cfg cn_icerst_in \"O2L3P_LONG_00000075_restart_ice\"
361    set_namelist namelist_top_cfg cn_trcrst_in \"O2L3P_LONG_00000075_restart_trc\"
[3520]362    # put ln_ironsed, ln_river, ln_ndepo, ln_dust
363    # if not you need input files, and for tests is not necessary
[4147]364    set_namelist namelist_pisces_cfg ln_presatm .false.
365    set_namelist namelist_pisces_cfg ln_varpar .false.
366    set_namelist namelist_pisces_cfg ln_dust .false.
367    set_namelist namelist_pisces_cfg ln_solub .false.
368    set_namelist namelist_pisces_cfg ln_river .false.
369    set_namelist namelist_pisces_cfg ln_ndepo .false.
370    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]371    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]372    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]373    # put ln_pisdmp to false : no restoring to global mean value
[4147]374    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[3537]375    for (( i=1; i<=$NPROC; i++)) ; do
376        L_NPROC=$(( $i - 1 ))
377        L_NPROC=`printf "%04d\n" ${L_NPROC}`
[7646]378        ln -sf ../LONG/O2L3P_LONG_00000075_restart_${L_NPROC}.nc .
379        ln -sf ../LONG/O2L3P_LONG_00000075_restart_trc_${L_NPROC}.nc .
380        ln -sf ../LONG/O2L3P_LONG_00000075_restart_ice_${L_NPROC}.nc .
[7715]381        ln -sf ../LONG/O2L3P_LONG_icebergs_00000075_restart_${L_NPROC}.nc O2L3P_LONG_00000075_restart_icebergs_${L_NPROC}.nc
[3537]382    done
[4245]383    if [ ${USING_MPMD} == "yes" ] ; then
384       set_xio_using_server iodef.xml true
385    else
386       set_xio_using_server iodef.xml false
387    fi
[3520]388    cd ${SETTE_DIR}
[7753]389    . ./prepare_job.sh input_ORCA2_LIM3_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]390    cd ${SETTE_DIR}
[3532]391    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]392fi
393
[7715]394if [ ${config} -eq 4 ] ;  then
[7646]395    ## Reproducibility tests for ORCA2_LIM3_PISCES
396    export TEST_NAME="REPRO_4_8"
[7715]397    cd ${CONFIG_DIR0}
[7646]398    . ./makenemo -m ${CMP_NAM} -n ORCA2LIM3PIS_32 -r ORCA2_LIM3_PISCES -j 8 del_key ${DEL_KEYS}
[3520]399    cd ${SETTE_DIR}
[4252]400    . ./param.cfg
401    . ./all_functions.sh
402    . ./prepare_exe_dir.sh
[3520]403    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]404    NPROC=32
[4245]405    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]406    cd ${EXE_DIR}
[4147]407    set_namelist namelist_cfg nn_it000 1
408    set_namelist namelist_cfg nn_itend 75
409    set_namelist namelist_cfg nn_fwb 0
410    set_namelist namelist_cfg ln_ctl .false.
411    set_namelist namelist_cfg ln_clobber .true.
[7646]412    set_namelist namelist_cfg ln_read_cfg .true.
413    set_namelist namelist_cfg ln_linssh .false.
[7715]414    set_namelist namelist_cfg ln_icebergs .true.
[4147]415    set_namelist namelist_cfg jpni 4
[7646]416    set_namelist namelist_cfg jpnj 8
417    set_namelist namelist_cfg jpnij 32
[8586]418    set_namelist namelist_ice_cfg ln_icediachk .true.
419    set_namelist namelist_ice_cfg ln_icediahsb .true.
[4147]420    set_namelist namelist_top_cfg ln_trcdta .false.
[3520]421    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
422    # if not you need input files, and for tests is not necessary
[4147]423    set_namelist namelist_pisces_cfg ln_presatm .false.
424    set_namelist namelist_pisces_cfg ln_varpar .false.
425    set_namelist namelist_pisces_cfg ln_dust .false.
426    set_namelist namelist_pisces_cfg ln_solub .false.
427    set_namelist namelist_pisces_cfg ln_river .false.
428    set_namelist namelist_pisces_cfg ln_ndepo .false.
429    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]430    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]431    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]432    # put ln_pisdmp to false : no restoring to global mean value
[4147]433    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]434    if [ ${USING_MPMD} == "yes" ] ; then
435       set_xio_using_server iodef.xml true
436    else
437       set_xio_using_server iodef.xml false
438    fi
[3520]439    cd ${SETTE_DIR}
[7753]440    . ./prepare_job.sh input_ORCA2_LIM3_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]441    cd ${SETTE_DIR}
[3532]442    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]443
444    cd ${SETTE_DIR}
[7646]445    export TEST_NAME="REPRO_8_4"
[4252]446    . ./prepare_exe_dir.sh
[3680]447    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]448    NPROC=32
[4245]449    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]450    cd ${EXE_DIR}
[4147]451    set_namelist namelist_cfg nn_it000 1
452    set_namelist namelist_cfg nn_itend 75
453    set_namelist namelist_cfg ln_clobber .true.
[7646]454    set_namelist namelist_cfg ln_read_cfg .true.
[7715]455    set_namelist namelist_cfg ln_linssh .false.
456    set_namelist namelist_cfg ln_icebergs .true.
[4316]457    set_namelist namelist_cfg nn_fwb 0
[7646]458    set_namelist namelist_cfg jpni 8
459    set_namelist namelist_cfg jpnj 4
460    set_namelist namelist_cfg jpnij 32
[8586]461    set_namelist namelist_ice_cfg ln_icediachk .true.
462    set_namelist namelist_ice_cfg ln_icediahsb .true.
[4147]463    set_namelist namelist_top_cfg ln_trcdta .false.
[3520]464    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
465    # if not you need input files, and for tests is not necessary
[4147]466    set_namelist namelist_pisces_cfg ln_presatm .false.
467    set_namelist namelist_pisces_cfg ln_varpar .false.
468    set_namelist namelist_pisces_cfg ln_dust .false.
469    set_namelist namelist_pisces_cfg ln_solub .false.
470    set_namelist namelist_pisces_cfg ln_river .false.
471    set_namelist namelist_pisces_cfg ln_ndepo .false.
472    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]473    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]474    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]475    # put ln_pisdmp to false : no restoring to global mean value
[4147]476    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]477    if [ ${USING_MPMD} == "yes" ] ; then
478       set_xio_using_server iodef.xml true
479    else
480       set_xio_using_server iodef.xml false
481    fi
[3520]482    cd ${SETTE_DIR}
[7753]483    . ./prepare_job.sh input_ORCA2_LIM3_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]484    cd ${SETTE_DIR}
485    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
486fi
487
488# TESTS FOR ORCA2_OFF_PISCES CONFIGURATION
[7715]489if [ ${config} -eq 5 ] ;  then
[3520]490    ## Restartability tests for ORCA2_OFF_PISCES
491    export TEST_NAME="LONG"
[7715]492    cd ${CONFIG_DIR0}
[7646]493    . ./makenemo -m ${CMP_NAM} -n ORCA2OFFPIS_LONG -r ORCA2_OFF_PISCES -j 8 del_key ${DEL_KEYS}
[3520]494    cd ${SETTE_DIR}
[4252]495    . ./param.cfg
496    . ./all_functions.sh
497    . ./prepare_exe_dir.sh
[3520]498    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]499    NPROC=32
[4245]500    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]501    cd ${EXE_DIR}
[4147]502    set_namelist namelist_cfg cn_exp \"OFFP_LONG\"
503    set_namelist namelist_cfg nn_it000 1
504    set_namelist namelist_cfg nn_itend 40
505    set_namelist namelist_cfg nn_stock 20
506    set_namelist namelist_cfg ln_clobber .true.
[7646]507    set_namelist namelist_cfg ln_read_cfg .true.
508    set_namelist namelist_cfg ln_linssh .true.
509    set_namelist namelist_cfg jpni 4
510    set_namelist namelist_cfg jpnj 8
511    set_namelist namelist_cfg jpnij 32
[4147]512    set_namelist namelist_top_cfg ln_trcdta .false.
[3520]513    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
514    # if not you need input files, and for tests is not necessary
[4147]515    set_namelist namelist_pisces_cfg ln_presatm .false.
516    set_namelist namelist_pisces_cfg ln_varpar .false.
517    set_namelist namelist_pisces_cfg ln_dust .false.
518    set_namelist namelist_pisces_cfg ln_solub .false.
519    set_namelist namelist_pisces_cfg ln_river .false.
520    set_namelist namelist_pisces_cfg ln_ndepo .false.
521    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]522    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]523    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]524    # put ln_pisdmp to false : no restoring to global mean value
[4147]525    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]526    if [ ${USING_MPMD} == "yes" ] ; then
527       set_xio_using_server iodef.xml true
528    else
529       set_xio_using_server iodef.xml false
530    fi
[3520]531    cd ${SETTE_DIR}
[7753]532    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]533   
534    cd ${SETTE_DIR}
535    export TEST_NAME="SHORT"
[4252]536    . ./prepare_exe_dir.sh
[3520]537    cd ${EXE_DIR}
[4147]538    set_namelist namelist_cfg cn_exp \"OFFP_SHORT\"
539    set_namelist namelist_cfg nn_it000 21
540    set_namelist namelist_cfg nn_itend 40
541    set_namelist namelist_cfg nn_stock 20
542    set_namelist namelist_cfg ln_clobber .true.
[7646]543    set_namelist namelist_cfg ln_read_cfg .true.
544    set_namelist namelist_cfg ln_linssh .true.
545    set_namelist namelist_cfg jpni 4
546    set_namelist namelist_cfg jpnj 8
547    set_namelist namelist_cfg jpnij 32
[4147]548    set_namelist namelist_top_cfg ln_rsttr .true.
549    set_namelist namelist_top_cfg nn_rsttr 2
550    set_namelist namelist_top_cfg cn_trcrst_in \"OFFP_LONG_00000020_restart_trc\"
[3537]551    for (( i=1; i<=$NPROC; i++)) ; do
552        L_NPROC=$(( $i - 1 ))
553        L_NPROC=`printf "%04d\n" ${L_NPROC}`
[3555]554        ln -sf ../LONG/OFFP_LONG_00000020_restart_trc_${L_NPROC}.nc .
[3537]555    done
[3520]556    # put ln_ironsed, ln_river, ln_ndepo, ln_dust
557    # if not you need input files, and for tests is not necessary
[4147]558    set_namelist namelist_pisces_cfg ln_presatm .false.
559    set_namelist namelist_pisces_cfg ln_varpar .false.
560    set_namelist namelist_pisces_cfg ln_dust .false.
561    set_namelist namelist_pisces_cfg ln_solub .false.
562    set_namelist namelist_pisces_cfg ln_river .false.
563    set_namelist namelist_pisces_cfg ln_ndepo .false.
564    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]565    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]566    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]567    # put ln_pisdmp to false : no restoring to global mean value
[4147]568    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]569    if [ ${USING_MPMD} == "yes" ] ; then
570       set_xio_using_server iodef.xml true
571    else
572       set_xio_using_server iodef.xml false
573    fi
[3520]574    cd ${SETTE_DIR}
[7753]575    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME}  ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]576    cd ${SETTE_DIR}
577    . ./fcm_job.sh $NPROC  ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
578fi
579
[7715]580if [ ${config} -eq 6 ] ;  then
[3680]581    ## Reproducibility tests for ORCA2_OFF_PISCES
[7646]582    export TEST_NAME="REPRO_4_8"
[7715]583    cd ${CONFIG_DIR0}
[7646]584    . ./makenemo -m ${CMP_NAM} -n ORCA2OFFPIS_32 -r ORCA2_OFF_PISCES -j 8 del_key ${DEL_KEYS}
[3520]585    cd ${SETTE_DIR}
[4252]586    . ./param.cfg
587    . ./all_functions.sh
588    . ./prepare_exe_dir.sh
[3520]589    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]590    NPROC=32
[4245]591    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]592    cd ${EXE_DIR}
[4147]593    set_namelist namelist_cfg nn_it000 1
594    set_namelist namelist_cfg nn_itend 40
595    set_namelist namelist_cfg ln_ctl .false.
596    set_namelist namelist_cfg ln_clobber .true.
[7646]597    set_namelist namelist_cfg ln_read_cfg .true.
598    set_namelist namelist_cfg ln_linssh .true.
[4147]599    set_namelist namelist_cfg jpni 4
[7646]600    set_namelist namelist_cfg jpnj 8
601    set_namelist namelist_cfg jpnij 32
[4147]602    set_namelist namelist_top_cfg ln_trcdta .false.
[3520]603    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
604    # if not you need input files, and for tests is not necessary
[4147]605    set_namelist namelist_pisces_cfg ln_presatm .false.
606    set_namelist namelist_pisces_cfg ln_varpar .false.
607    set_namelist namelist_pisces_cfg ln_dust .false.
608    set_namelist namelist_pisces_cfg ln_solub .false.
609    set_namelist namelist_pisces_cfg ln_river .false.
610    set_namelist namelist_pisces_cfg ln_ndepo .false.
611    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]612    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]613    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]614    # put ln_pisdmp to false : no restoring to global mean value
[4147]615    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]616    if [ ${USING_MPMD} == "yes" ] ; then
617       set_xio_using_server iodef.xml true
618    else
619       set_xio_using_server iodef.xml false
620    fi
[3520]621    cd ${SETTE_DIR}
[7753]622    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]623    cd ${SETTE_DIR}
[3532]624    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]625
626    cd ${SETTE_DIR}
[7646]627    export TEST_NAME="REPRO_8_4"
[4252]628    . ./prepare_exe_dir.sh
[3680]629    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]630    NPROC=32
[4245]631    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]632    cd ${EXE_DIR}
[4147]633    set_namelist namelist_cfg nn_it000 1
634    set_namelist namelist_cfg nn_itend 40
635    set_namelist namelist_cfg ln_ctl .false.
636    set_namelist namelist_cfg ln_clobber .true.
[7646]637    set_namelist namelist_cfg ln_read_cfg .true.
638    set_namelist namelist_cfg ln_linssh .true.
639    set_namelist namelist_cfg jpni 8
640    set_namelist namelist_cfg jpnj 4
641    set_namelist namelist_cfg jpnij 32
[4147]642    set_namelist namelist_top_cfg ln_trcdta .false.
[3520]643    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
644    # if not you need input files, and for tests is not necessary
[4147]645    set_namelist namelist_pisces_cfg ln_presatm .false.
646    set_namelist namelist_pisces_cfg ln_varpar .false.
647    set_namelist namelist_pisces_cfg ln_dust .false.
648    set_namelist namelist_pisces_cfg ln_solub .false.
649    set_namelist namelist_pisces_cfg ln_river .false.
650    set_namelist namelist_pisces_cfg ln_ndepo .false.
651    set_namelist namelist_pisces_cfg ln_ironsed .false.
[7646]652    set_namelist namelist_pisces_cfg ln_ironice .false.
[4147]653    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[3680]654    # put ln_pisdmp to false : no restoring to global mean value
[4147]655    set_namelist namelist_pisces_cfg ln_pisdmp .false.
[4245]656    if [ ${USING_MPMD} == "yes" ] ; then
657       set_xio_using_server iodef.xml true
658    else
659       set_xio_using_server iodef.xml false
660    fi
[3520]661    cd ${SETTE_DIR}
[7753]662    . ./prepare_job.sh input_ORCA2_OFF_PISCES.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]663    cd ${SETTE_DIR}
664    . ./fcm_job.sh $NPROC  ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
665fi
666
[3680]667# TESTS FOR AMM12 CONFIGURATION
[7715]668if [ ${config} -eq 7 ] ;  then
[3532]669    ## Restartability tests for AMM12
670    export TEST_NAME="LONG"
[7715]671    cd ${CONFIG_DIR0}
[8367]672    . ./makenemo -m ${CMP_NAM} -n AMM12_LONG -r AMM12 -j 8 del_key ${DEL_KEYS}
[3520]673    cd ${SETTE_DIR}
[4252]674    . ./param.cfg
675    . ./all_functions.sh
676    . ./prepare_exe_dir.sh
[3520]677    JOB_FILE=${EXE_DIR}/run_job.sh
678    NPROC=32
[4245]679    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]680    cd ${EXE_DIR}
[4147]681    set_namelist namelist_cfg nn_it000 1
[4252]682    set_namelist namelist_cfg nn_itend 576
683    set_namelist namelist_cfg nn_stock 288
[4147]684    set_namelist namelist_cfg nn_fwb 0
685    set_namelist namelist_cfg ln_ctl .false.
686    set_namelist namelist_cfg ln_clobber .true.
[7646]687    set_namelist namelist_cfg ln_read_cfg .true.
688    set_namelist namelist_cfg ln_linssh .false.
689    set_namelist namelist_cfg jpni 4
690    set_namelist namelist_cfg jpnj 8
[4147]691    set_namelist namelist_cfg jpnij 32
[4245]692    if [ ${USING_MPMD} == "yes" ] ; then
693       set_xio_using_server iodef.xml true
694    else
695       set_xio_using_server iodef.xml false
696    fi
[3520]697    cd ${SETTE_DIR}
[7753]698    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]699
700    cd ${SETTE_DIR}
[3532]701    export TEST_NAME="SHORT"
[4379]702    . ./prepare_exe_dir.sh
[3520]703    cd ${EXE_DIR}
[4252]704    set_namelist namelist_cfg nn_it000 289
705    set_namelist namelist_cfg nn_itend 576
[4147]706    set_namelist namelist_cfg nn_fwb 0
707    set_namelist namelist_cfg ln_ctl .false.
708    set_namelist namelist_cfg ln_clobber .true.
[7646]709    set_namelist namelist_cfg ln_read_cfg .true.
710    set_namelist namelist_cfg ln_linssh .false.
711    set_namelist namelist_cfg jpni 4
712    set_namelist namelist_cfg jpnj 8
[4147]713    set_namelist namelist_cfg jpnij 32
714    set_namelist namelist_cfg ln_rstart .true.
715    set_namelist namelist_cfg nn_rstctl 2
[4252]716    set_namelist namelist_cfg cn_ocerst_in \"AMM12_00000288_restart_oce_out\"
717    set_namelist namelist_cfg nn_date0 20120102
[3537]718    for (( i=1; i<=$NPROC; i++)) ; do
719        L_NPROC=$(( $i - 1 ))
720        L_NPROC=`printf "%04d\n" ${L_NPROC}`
[4252]721        ln -sf ../LONG/AMM12_00000288_restart_oce_out_${L_NPROC}.nc .
[3537]722    done
[4245]723    if [ ${USING_MPMD} == "yes" ] ; then
724       set_xio_using_server iodef.xml true
725    else
726       set_xio_using_server iodef.xml false
727    fi
[3520]728    cd ${SETTE_DIR}
[7753]729    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]730    cd ${SETTE_DIR}
[3532]731    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]732fi
733
[7715]734if [ ${config} -eq 8 ] ;  then
[3680]735## Reproducibility tests for AMM12
736    export TEST_NAME="REPRO_8_4"
[7715]737    cd ${CONFIG_DIR0}
[7646]738    . ./makenemo -m ${CMP_NAM} -n AMM12_32 -r AMM12 -j 8 del_key ${DEL_KEYS}
[3520]739    cd ${SETTE_DIR}
[4252]740    . ./param.cfg
741    . ./all_functions.sh
742    . ./prepare_exe_dir.sh
[3520]743    JOB_FILE=${EXE_DIR}/run_job.sh
744    NPROC=32
[4245]745    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]746    cd ${EXE_DIR}
[4147]747    set_namelist namelist_cfg nn_it000 1
748    set_namelist namelist_cfg nn_itend 576
749    set_namelist namelist_cfg nn_fwb 0
750    set_namelist namelist_cfg ln_ctl .false.
751    set_namelist namelist_cfg ln_clobber .true.
[7646]752    set_namelist namelist_cfg ln_read_cfg .true.
753    set_namelist namelist_cfg ln_linssh .false.
[4147]754    set_namelist namelist_cfg jpni 8
755    set_namelist namelist_cfg jpnj 4
756    set_namelist namelist_cfg jpnij 32
[4245]757    if [ ${USING_MPMD} == "yes" ] ; then
758       set_xio_using_server iodef.xml true
759    else
760       set_xio_using_server iodef.xml false
761    fi
[3520]762    cd ${SETTE_DIR}
[7753]763    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]764    cd ${SETTE_DIR}
765    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
766
767    cd ${SETTE_DIR}
[3680]768    export TEST_NAME="REPRO_4_8"
[4252]769    . ./prepare_exe_dir.sh
[5478]770    JOB_FILE=${EXE_DIR}/run_job.sh
771    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[3520]772    cd ${EXE_DIR}
[4147]773    set_namelist namelist_cfg nn_it000 1
774    set_namelist namelist_cfg nn_itend 576
775    set_namelist namelist_cfg nn_fwb 0
776    set_namelist namelist_cfg ln_ctl .false.
777    set_namelist namelist_cfg ln_clobber .true.
[7646]778    set_namelist namelist_cfg ln_read_cfg .true.
779    set_namelist namelist_cfg ln_linssh .false.
[4147]780    set_namelist namelist_cfg jpni 4
781    set_namelist namelist_cfg jpnj 8
782    set_namelist namelist_cfg jpnij 32
[4245]783    if [ ${USING_MPMD} == "yes" ] ; then
784       set_xio_using_server iodef.xml true
785    else
786       set_xio_using_server iodef.xml false
787    fi
[3520]788    cd ${SETTE_DIR}
[7753]789    . ./prepare_job.sh input_AMM12.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[3520]790    cd ${SETTE_DIR}
[3532]791    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
[3520]792fi
793
794
[7646]795# TESTS FOR ORCA2_SAS_LIM3 CONFIGURATION
[7715]796if [ ${config} -eq 9 ] ;  then
[4147]797    ## Restartability tests for SAS
798    export TEST_NAME="LONG"
[7715]799    cd ${CONFIG_DIR0}
[7646]800    . ./makenemo -m ${CMP_NAM} -n SAS_LONG -r ORCA2_SAS_LIM3 -j 8 del_key ${DEL_KEYS}
[4147]801    cd ${SETTE_DIR}
[4252]802    . ./param.cfg
803    . ./all_functions.sh
804    . ./prepare_exe_dir.sh
[4147]805    JOB_FILE=${EXE_DIR}/run_job.sh
806    NPROC=32
[7646]807    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
[4147]808    cd ${EXE_DIR}
809    set_namelist namelist_cfg cn_exp \"SAS\"
810    set_namelist namelist_cfg nn_it000 1
811    set_namelist namelist_cfg nn_itend 100
812    set_namelist namelist_cfg nn_stock 50
813    set_namelist namelist_cfg ln_ctl .false.
814    set_namelist namelist_cfg ln_clobber .true.
[7646]815    set_namelist namelist_cfg ln_read_cfg .true.
816    set_namelist namelist_cfg ln_linssh .true.
[4316]817    set_namelist namelist_cfg nn_fwb 0
[7646]818    set_namelist namelist_cfg jpni 4
819    set_namelist namelist_cfg jpnj 8
[4147]820    set_namelist namelist_cfg jpnij 32
[8586]821    set_namelist namelist_ice_cfg ln_icediachk .true.
[4245]822    if [ ${USING_MPMD} == "yes" ] ; then
823       set_xio_using_server iodef.xml true
824    else
825       set_xio_using_server iodef.xml false
826    fi
[4147]827    cd ${SETTE_DIR}
[7753]828    . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[4147]829
830    cd ${SETTE_DIR}
831    export TEST_NAME="SHORT"
[4252]832    . ./prepare_exe_dir.sh
[4147]833    cd ${EXE_DIR}
834    set_namelist namelist_cfg cn_exp \"SAS\"
835    set_namelist namelist_cfg nn_it000 51
836    set_namelist namelist_cfg nn_itend 100
837    set_namelist namelist_cfg ln_ctl .false.
838    set_namelist namelist_cfg ln_clobber .true.
[7646]839    set_namelist namelist_cfg ln_read_cfg .true.
840    set_namelist namelist_cfg ln_linssh .true.
[4316]841    set_namelist namelist_cfg nn_fwb 0
[7646]842    set_namelist namelist_cfg jpni 4
843    set_namelist namelist_cfg jpnj 8
[4147]844    set_namelist namelist_cfg jpnij 32
[7646]845    set_namelist namelist_cfg ln_rstart .true.
[4147]846    set_namelist namelist_cfg nn_rstctl 2
[8586]847    set_namelist namelist_ice_cfg ln_icediachk .true.
[7646]848    set_namelist namelist_ice_cfg cn_icerst_in \"SAS_00000050_restart_ice\"
[4245]849    if [ ${USING_MPMD} == "yes" ] ; then
850       set_xio_using_server iodef.xml true
851    else
852       set_xio_using_server iodef.xml false
853    fi
[7646]854    for (( i=1; i<=$NPROC; i++)) ; do
855        L_NPROC=$(( $i - 1 ))
856        L_NPROC=`printf "%04d\n" ${L_NPROC}`
857        ln -sf ../LONG/SAS_00000050_restart_ice_${L_NPROC}.nc .
858    done
[4147]859    cd ${SETTE_DIR}
[7753]860    . ./prepare_job.sh input_SAS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[4147]861    cd ${SETTE_DIR}
862    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
863fi
864
[7646]865# TESTS FOR ISOMIP CONFIGURATION
[7715]866if [ ${config} -eq 10 ] ;  then
[4990]867    ## Restartability tests for ISOMIP
868    export TEST_NAME="LONG"
[7715]869    cd ${CONFIG_DIR0}
870    . ./makenemo -m ${CMP_NAM} -n ISOMIP_LONG -r ISOMIP -a TEST_CASES -j 8 del_key ${DEL_KEYS}
[4990]871    cd ${SETTE_DIR}
872    . ./param.cfg
873    . ./all_functions.sh
874    . ./prepare_exe_dir.sh
875    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]876    NPROC=32
[4990]877    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
878    cd ${EXE_DIR}
879    set_namelist namelist_cfg cn_exp \"ISOMIP_LONG\"
880    set_namelist namelist_cfg nn_it000 1
881    set_namelist namelist_cfg nn_itend 96
882    set_namelist namelist_cfg nn_stock 48
883    set_namelist namelist_cfg ln_clobber .true.
[7715]884    set_namelist namelist_cfg ln_read_cfg .false.
[7646]885    set_namelist namelist_cfg jpni 4
886    set_namelist namelist_cfg jpnj 8
887    set_namelist namelist_cfg jpnij 32
[4990]888    if [ ${USING_MPMD} == "yes" ] ; then
889       set_xio_using_server iodef.xml true
890    else
891       set_xio_using_server iodef.xml false
892    fi
893    cd ${SETTE_DIR}
[7753]894    . ./prepare_job.sh input_ISOMIP.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[4147]895
[4990]896    cd ${SETTE_DIR}
897    export TEST_NAME="SHORT"
898    . ./prepare_exe_dir.sh
899    cd ${EXE_DIR}
900    set_namelist namelist_cfg cn_exp \"ISOMIP_SHORT\"
901    set_namelist namelist_cfg nn_it000 49
902    set_namelist namelist_cfg nn_itend 96
903    set_namelist namelist_cfg nn_stock 48
904    set_namelist namelist_cfg ln_rstart .true.
905    set_namelist namelist_cfg nn_rstctl 2
906    set_namelist namelist_cfg ln_clobber .true.
[7715]907    set_namelist namelist_cfg ln_read_cfg .false.
[7646]908    set_namelist namelist_cfg jpni 4
909    set_namelist namelist_cfg jpnj 8
910    set_namelist namelist_cfg jpnij 32
[4990]911    set_namelist namelist_cfg cn_ocerst_in \"ISOMIP_LONG_00000048_restart\"
912    if [ ${USING_MPMD} == "yes" ] ; then
913       set_xio_using_server iodef.xml true
914    else
915       set_xio_using_server iodef.xml false
916    fi
917    for (( i=1; i<=$NPROC; i++)) ; do
918        L_NPROC=$(( $i - 1 ))
919        L_NPROC=`printf "%04d\n" ${L_NPROC}`
920        ln -sf ../LONG/ISOMIP_LONG_00000048_restart_${L_NPROC}.nc .
921    done
922    if [ ${USING_MPMD} == "yes" ] ; then
923       set_xio_using_server iodef.xml true
924    else
925       set_xio_using_server iodef.xml false
926    fi
927    cd ${SETTE_DIR}
[7753]928    . ./prepare_job.sh input_ISOMIP.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[4990]929    cd ${SETTE_DIR}
930    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
931fi
[7715]932if [ ${config} -eq 11 ] ;  then
[4990]933    ## Reproducibility tests for ISOMIP
[7646]934    export TEST_NAME="REPRO_4_8"
[7715]935    cd ${CONFIG_DIR0}
936    . ./makenemo -m ${CMP_NAM} -n ISOMIP_32 -r ISOMIP -a TEST_CASES -j 8 del_key ${DEL_KEYS}
[4990]937    cd ${SETTE_DIR}
938    . ./param.cfg
939    . ./all_functions.sh
940    . ./prepare_exe_dir.sh
941    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]942    NPROC=32
[4990]943    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
944    cd ${EXE_DIR}
945    set_namelist namelist_cfg cn_exp \"ISOMIP_14\"
946    set_namelist namelist_cfg nn_it000 1
947    set_namelist namelist_cfg nn_itend 48
948    set_namelist namelist_cfg ln_ctl .false.
949    set_namelist namelist_cfg ln_clobber .true.
[7715]950    set_namelist namelist_cfg ln_read_cfg .false.
[7646]951    set_namelist namelist_cfg jpni 4
952    set_namelist namelist_cfg jpnj 8
953    set_namelist namelist_cfg jpnij 32
[4990]954    if [ ${USING_MPMD} == "yes" ] ; then
955       set_xio_using_server iodef.xml true
956    else
957       set_xio_using_server iodef.xml false
958    fi
959    cd ${SETTE_DIR}
[7753]960    . ./prepare_job.sh input_ISOMIP.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[4990]961    cd ${SETTE_DIR}
962    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
963
964    cd ${SETTE_DIR}
[7646]965    export TEST_NAME="REPRO_8_4"
[4990]966    . ./prepare_exe_dir.sh
967    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]968    NPROC=32
[4990]969    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
970    cd ${EXE_DIR}
971    set_namelist namelist_cfg cn_exp \"ISOMIP_22\"
972    set_namelist namelist_cfg nn_it000 1
973    set_namelist namelist_cfg nn_itend 48
974    set_namelist namelist_cfg ln_ctl .false.
975    set_namelist namelist_cfg ln_clobber .true.
[7715]976    set_namelist namelist_cfg ln_read_cfg .false.
[7646]977    set_namelist namelist_cfg jpni 8
978    set_namelist namelist_cfg jpnj 4
979    set_namelist namelist_cfg jpnij 32
[4990]980    if [ ${USING_MPMD} == "yes" ] ; then
981       set_xio_using_server iodef.xml true
982    else
983       set_xio_using_server iodef.xml false
984    fi
985    cd ${SETTE_DIR}
[7753]986    . ./prepare_job.sh input_ISOMIP.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[4990]987    cd ${SETTE_DIR}
988    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
989
990fi
991
992## Test assimilation interface code, OBS and ASM for reproducibility
993## Restartability not tested (ASM code not restartable while increments are being applied)
[7715]994if [ ${config} -eq 12 ] ; then
995   ## Reproducibility tests for ORCA2_LIM3_OBS
[7646]996    export TEST_NAME="REPRO_4_8"
[7715]997    cd ${CONFIG_DIR0}
[7756]998    . ./makenemo -m ${CMP_NAM} -n ORCA2_LIM3_OBS -r ORCA2_LIM3_PISCES -d "OPA_SRC LIM_SRC_3"  -j 8 add_key "key_asminc" del_key "key_top"
[4990]999    cd ${SETTE_DIR}
1000    . ./param.cfg
1001    . ./all_functions.sh
1002    . ./prepare_exe_dir.sh
1003    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]1004    NPROC=32
[4990]1005    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1006    cd ${EXE_DIR}
1007    set_namelist namelist_cfg nn_it000 1
1008    set_namelist namelist_cfg nn_itend 75
1009    set_namelist namelist_cfg nn_fwb 0
1010    set_namelist namelist_cfg ln_ctl .false.
1011    set_namelist namelist_cfg ln_clobber .true.
[7646]1012    set_namelist namelist_cfg ln_read_cfg .true.
1013    set_namelist namelist_cfg ln_linssh .false.
[7722]1014    set_namelist namelist_cfg ln_icebergs .false.
[4990]1015    set_namelist namelist_cfg jpni 4
[7646]1016    set_namelist namelist_cfg jpnj 8
1017    set_namelist namelist_cfg jpnij 32
[6140]1018    set_namelist namelist_cfg ln_diaobs .true.
[4990]1019    set_namelist namelist_cfg ln_t3d .true.
1020    set_namelist namelist_cfg ln_s3d .true.
1021    set_namelist namelist_cfg ln_sst .true.
1022    set_namelist namelist_cfg ln_sla .true.
[6140]1023    set_namelist namelist_cfg ln_sic .true.
1024    set_namelist namelist_cfg ln_vel3d .true.
[4990]1025    set_namelist namelist_cfg ln_bkgwri .true.
1026    set_namelist namelist_cfg ln_trainc .true.
1027    set_namelist namelist_cfg ln_dyninc .true.
1028    set_namelist namelist_cfg ln_sshinc .true.
1029    set_namelist namelist_cfg ln_asmiau .true.
[7722]1030    #remove all useless options for pisces (due to ORCA2_LIM3_PISCES reference configuration)
1031    set_namelist namelist_top_cfg ln_trcdta .false.
1032    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
1033    # if not you need input files, and for tests is not necessary
1034    set_namelist namelist_pisces_cfg ln_presatm .false.
1035    set_namelist namelist_pisces_cfg ln_varpar .false.
1036    set_namelist namelist_pisces_cfg ln_dust .false.
1037    set_namelist namelist_pisces_cfg ln_solub .false.
1038    set_namelist namelist_pisces_cfg ln_river .false.
1039    set_namelist namelist_pisces_cfg ln_ndepo .false.
1040    set_namelist namelist_pisces_cfg ln_ironsed .false.
1041    set_namelist namelist_pisces_cfg ln_ironice .false.
1042    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[4990]1043    if [ ${USING_MPMD} == "yes" ] ; then
1044       set_xio_using_server iodef.xml true
1045    else
1046       set_xio_using_server iodef.xml false
1047    fi
1048    cd ${SETTE_DIR}
[7753]1049    . ./prepare_job.sh input_ORCA2_LIM3_OBS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[4990]1050    cd ${SETTE_DIR}
1051    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1052
1053   cd ${SETTE_DIR}
[7646]1054    export TEST_NAME="REPRO_8_4"
[4990]1055    . ./prepare_exe_dir.sh
1056    JOB_FILE=${EXE_DIR}/run_job.sh
[7646]1057    NPROC=32
[4990]1058    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1059    cd ${EXE_DIR}
1060    set_namelist namelist_cfg nn_it000 1
1061    set_namelist namelist_cfg nn_itend 75
1062    set_namelist namelist_cfg nn_fwb 0
1063    set_namelist namelist_cfg ln_ctl .false.
1064    set_namelist namelist_cfg ln_clobber .true.
[7646]1065    set_namelist namelist_cfg ln_read_cfg .true.
1066    set_namelist namelist_cfg ln_linssh .false.
[7722]1067    set_namelist namelist_cfg ln_icebergs .false.
[7646]1068    set_namelist namelist_cfg jpni 8
1069    set_namelist namelist_cfg jpnj 4
1070    set_namelist namelist_cfg jpnij 32
[6140]1071    set_namelist namelist_cfg ln_diaobs .true.
[4990]1072    set_namelist namelist_cfg ln_t3d .true.
1073    set_namelist namelist_cfg ln_s3d .true.
1074    set_namelist namelist_cfg ln_sst .true.
1075    set_namelist namelist_cfg ln_sla .true.
[6140]1076    set_namelist namelist_cfg ln_sic .true.
1077    set_namelist namelist_cfg ln_vel3d .true.
[4990]1078    set_namelist namelist_cfg ln_bkgwri .true.
1079    set_namelist namelist_cfg ln_trainc .true.
1080    set_namelist namelist_cfg ln_dyninc .true.
1081    set_namelist namelist_cfg ln_sshinc .true.
1082    set_namelist namelist_cfg ln_asmiau .true.
[7722]1083    #remove all useless options for pisces (due to ORCA2_LIM3_PISCES reference configuration)
1084    set_namelist namelist_top_cfg ln_trcdta .false.
1085    # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false
1086    # if not you need input files, and for tests is not necessary
1087    set_namelist namelist_pisces_cfg ln_presatm .false.
1088    set_namelist namelist_pisces_cfg ln_varpar .false.
1089    set_namelist namelist_pisces_cfg ln_dust .false.
1090    set_namelist namelist_pisces_cfg ln_solub .false.
1091    set_namelist namelist_pisces_cfg ln_river .false.
1092    set_namelist namelist_pisces_cfg ln_ndepo .false.
1093    set_namelist namelist_pisces_cfg ln_ironsed .false.
1094    set_namelist namelist_pisces_cfg ln_ironice .false.
1095    set_namelist namelist_pisces_cfg ln_hydrofe .false.
[4990]1096    if [ ${USING_MPMD} == "yes" ] ; then
1097       set_xio_using_server iodef.xml true
1098    else
1099       set_xio_using_server iodef.xml false
1100    fi
1101    cd ${SETTE_DIR}
[7753]1102    . ./prepare_job.sh input_ORCA2_LIM3_OBS.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[4990]1103    cd ${SETTE_DIR}
1104    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1105fi
[7715]1106# TEST FOR ORCA2_LIM3_AGRIF : simple test of running AGRIF (no restartability neither reproducibility tests)
1107if [ ${config} -eq 13 ] ;  then
1108    ## ORCA2_LIM3 with Agulhas AGRIF zoom in MPI
[4245]1109    export TEST_NAME="SHORT"
[7715]1110    cd ${CONFIG_DIR0}
[8688]1111    . ./makenemo -m ${CMP_NAM} -n ORCA2AGUL_1_2 -r ORCA2_LIM3_PISCES -d "OPA_SRC LIM_SRC_3 NST_SRC" -j 8 add_key "key_agrif" del_key "key_top"
[4245]1112    cd ${SETTE_DIR}
[4252]1113    . ./param.cfg
1114    . ./all_functions.sh
1115    . ./prepare_exe_dir.sh
[4245]1116    JOB_FILE=${EXE_DIR}/run_job.sh
1117    NPROC=2
1118    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1119    cd ${EXE_DIR}
1120    set_namelist namelist_cfg nn_it000 1
1121    set_namelist namelist_cfg nn_itend 75
1122    set_namelist namelist_cfg ln_ctl .false.
1123    set_namelist namelist_cfg ln_clobber .true.
[7646]1124    set_namelist namelist_cfg ln_read_cfg .true.
1125    set_namelist namelist_cfg ln_linssh .true.
1126    set_namelist namelist_cfg ln_hpg_sco .false.
1127    set_namelist namelist_cfg ln_hpg_zps .true.
[4316]1128    set_namelist namelist_cfg nn_fwb 0
[4245]1129    set_namelist namelist_cfg jpni 1
1130    set_namelist namelist_cfg jpnj 2
1131    set_namelist namelist_cfg jpnij 2
1132    set_namelist 1_namelist_cfg nn_it000 1
1133    set_namelist 1_namelist_cfg nn_itend 150
[8367]1134    set_namelist 1_namelist_cfg nn_fsbc 1
[4245]1135    set_namelist 1_namelist_cfg ln_ctl .false.
1136    set_namelist 1_namelist_cfg ln_clobber .true.
[7646]1137    set_namelist 1_namelist_cfg ln_read_cfg .true.
1138    set_namelist 1_namelist_cfg ln_linssh .true.
[8735]1139    set_namelist 1_namelist_cfg ln_zdfiwm .false.
[7646]1140    set_namelist 1_namelist_cfg ln_hpg_sco .false.
1141    set_namelist 1_namelist_cfg ln_hpg_zps .true.
[4245]1142    if [ ${USING_MPMD} == "yes" ] ; then
1143       set_xio_using_server iodef.xml true
1144    else
1145       set_xio_using_server iodef.xml false
1146    fi
1147    cd ${SETTE_DIR}
[7753]1148    . ./prepare_job.sh input_ORCA2_LIM3_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[4245]1149    cd ${SETTE_DIR}
1150    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1151fi
1152
[5589]1153# test code corruption with AGRIF
[7715]1154# Compile and run with or without AGRIF ORCA2_LIM3
1155if [ ${config} -eq 14 ] ;  then
[7646]1156    # First run same as 15 but without zoom
[5589]1157    export TEST_NAME="SHORT_NOZOOM"
[7715]1158    cd ${CONFIG_DIR0}
[8688]1159    . ./makenemo -m ${CMP_NAM} -n ORCA2AGUL_2_2 -r ORCA2_LIM3_PISCES -d "OPA_SRC LIM_SRC_3 NST_SRC" -j 8 add_key "key_agrif" del_key "key_top"
[5589]1160    cd ${SETTE_DIR}
1161    . ./param.cfg
1162    . ./all_functions.sh
1163    . ./prepare_exe_dir.sh
1164    JOB_FILE=${EXE_DIR}/run_job.sh
1165    NPROC=4
1166    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1167    cd ${EXE_DIR}
1168    set_namelist namelist_cfg nn_it000 1
1169    set_namelist namelist_cfg nn_itend 75
1170    set_namelist namelist_cfg ln_ctl .false.
1171    set_namelist namelist_cfg ln_clobber .true.
[7646]1172    set_namelist namelist_cfg ln_read_cfg .true.
1173    set_namelist namelist_cfg ln_linssh .true.
1174    set_namelist namelist_cfg ln_hpg_sco .false.
1175    set_namelist namelist_cfg ln_hpg_zps .true.
[5589]1176    set_namelist namelist_cfg nn_fwb 0
1177    set_namelist namelist_cfg jpni 2
1178    set_namelist namelist_cfg jpnj 2
1179    set_namelist namelist_cfg jpnij 4
1180#
1181#   Set the number of fine grids to zero:   
1182    sed -i "1s/.*/0/" ${EXE_DIR}/AGRIF_FixedGrids.in
1183
1184    if [ ${USING_MPMD} == "yes" ] ; then
1185       set_xio_using_server iodef.xml true
1186    else
1187       set_xio_using_server iodef.xml false
1188    fi
1189    cd ${SETTE_DIR}
[7753]1190    . ./prepare_job.sh input_ORCA2_LIM3_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[5589]1191    cd ${SETTE_DIR}
1192    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1193
1194    export TEST_NAME="SHORT_NOAGRIF"
[7715]1195    cd ${CONFIG_DIR0}
[8688]1196    . ./makenemo -m ${CMP_NAM} -n ORCA2AGUL_2_2_NAG -r ORCA2_LIM3_PISCES -d "OPA_SRC LIM_SRC_3 NST_SRC" -j 8 del_key "key_top"
[5589]1197    cd ${SETTE_DIR}
1198    . ./param.cfg
1199    . ./all_functions.sh
1200    . ./prepare_exe_dir.sh
1201    JOB_FILE=${EXE_DIR}/run_job.sh
1202    NPROC=4
1203    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1204    cd ${EXE_DIR}
1205    set_namelist namelist_cfg nn_it000 1
1206    set_namelist namelist_cfg nn_itend 75
1207    set_namelist namelist_cfg ln_ctl .false.
1208    set_namelist namelist_cfg ln_clobber .true.
[7646]1209    set_namelist namelist_cfg ln_read_cfg .true.
1210    set_namelist namelist_cfg ln_linssh .true.
1211    set_namelist namelist_cfg ln_hpg_sco .false.
1212    set_namelist namelist_cfg ln_hpg_zps .true.
[5589]1213    set_namelist namelist_cfg nn_fwb 0
1214    set_namelist namelist_cfg jpni 2
1215    set_namelist namelist_cfg jpnj 2
1216    set_namelist namelist_cfg jpnij 4
1217#
1218    if [ ${USING_MPMD} == "yes" ] ; then
1219       set_xio_using_server iodef.xml true
1220    else
1221       set_xio_using_server iodef.xml false
1222    fi
1223    cd ${SETTE_DIR}
[7753]1224    . ./prepare_job.sh input_ORCA2_LIM3_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[5589]1225    cd ${SETTE_DIR}
1226    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1227
1228fi
1229
[7715]1230## Restartability tests for ORCA2_LIM3_AGRIF
1231if [ ${config} -eq 15 ] ;  then
[5589]1232    export TEST_NAME="LONG"
[7715]1233    cd ${CONFIG_DIR0}
[8688]1234    . ./makenemo -m ${CMP_NAM} -n ORCA2AGUL_LONG -r ORCA2_LIM3_PISCES -d "OPA_SRC LIM_SRC_3 NST_SRC" -j 8 add_key "key_agrif" del_key "key_top"
[5589]1235    cd ${SETTE_DIR}
1236    . ./param.cfg
1237    . ./all_functions.sh
1238    . ./prepare_exe_dir.sh
1239    JOB_FILE=${EXE_DIR}/run_job.sh
1240    NPROC=4
1241    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1242    cd ${EXE_DIR}
1243    set_namelist namelist_cfg cn_exp \"O2LP_LONG\"
1244    set_namelist namelist_cfg nn_it000 1
1245    set_namelist namelist_cfg nn_itend 150
1246    set_namelist namelist_cfg nn_stock 75
1247    set_namelist namelist_cfg ln_clobber .true.
[7646]1248    set_namelist namelist_cfg ln_read_cfg .true.
1249    set_namelist namelist_cfg ln_linssh .true.
1250    set_namelist namelist_cfg ln_hpg_sco .false.
1251    set_namelist namelist_cfg ln_hpg_zps .true.
[5589]1252    set_namelist namelist_cfg nn_fwb 0
1253    set_namelist namelist_cfg jpni 2
1254    set_namelist namelist_cfg jpnj 2
1255    set_namelist namelist_cfg jpnij 4
1256    set_namelist 1_namelist_cfg cn_exp \"O2LP_LONG\"
1257    set_namelist 1_namelist_cfg nn_it000 1
1258    set_namelist 1_namelist_cfg nn_itend 300
1259    set_namelist 1_namelist_cfg nn_stock 150
[8367]1260    set_namelist 1_namelist_cfg nn_fsbc 1
[5589]1261    set_namelist 1_namelist_cfg ln_ctl .false.
1262    set_namelist 1_namelist_cfg ln_clobber .true.
[7646]1263    set_namelist 1_namelist_cfg ln_read_cfg .true.
1264    set_namelist 1_namelist_cfg ln_linssh .true.
[8735]1265    set_namelist 1_namelist_cfg ln_zdfiwm .false.
[7646]1266    set_namelist 1_namelist_cfg ln_hpg_sco .false.
1267    set_namelist 1_namelist_cfg ln_hpg_zps .true.
[5589]1268#
1269    if [ ${USING_MPMD} == "yes" ] ; then
1270       set_xio_using_server iodef.xml true
1271    else
1272       set_xio_using_server iodef.xml false
1273    fi
1274    cd ${SETTE_DIR}
[7753]1275    . ./prepare_job.sh input_ORCA2_LIM3_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[5589]1276   
1277    cd ${SETTE_DIR}
1278    export TEST_NAME="SHORT"
1279    . ./prepare_exe_dir.sh
1280    cd ${EXE_DIR}
1281    set_namelist namelist_cfg cn_exp \"O2LP_SHORT\"
1282    set_namelist namelist_cfg nn_it000 76
1283    set_namelist namelist_cfg nn_itend 150
1284    set_namelist namelist_cfg nn_stock 75
1285    set_namelist namelist_cfg ln_rstart .true.
1286    set_namelist namelist_cfg nn_rstctl 2
1287    set_namelist namelist_cfg ln_clobber .true.
[7646]1288    set_namelist namelist_cfg ln_read_cfg .true.
1289    set_namelist namelist_cfg ln_linssh .true.
1290    set_namelist namelist_cfg ln_hpg_sco .false.
1291    set_namelist namelist_cfg ln_hpg_zps .true.
[5589]1292    set_namelist namelist_cfg nn_fwb 0
1293    set_namelist namelist_cfg jpni 2
1294    set_namelist namelist_cfg jpnj 2
1295    set_namelist namelist_cfg jpnij 4
1296    set_namelist 1_namelist_cfg cn_exp \"O2LP_SHORT\"
1297    set_namelist 1_namelist_cfg nn_it000 151
1298    set_namelist 1_namelist_cfg nn_itend 300
1299    set_namelist 1_namelist_cfg nn_stock 150
[8367]1300    set_namelist 1_namelist_cfg nn_fsbc 1
[5589]1301    set_namelist 1_namelist_cfg ln_rstart .true.
1302    set_namelist 1_namelist_cfg nn_rstctl 2
1303    set_namelist 1_namelist_cfg ln_clobber .true.
[7646]1304    set_namelist 1_namelist_cfg ln_read_cfg .true.
1305    set_namelist 1_namelist_cfg ln_linssh .true.
[8735]1306    set_namelist 1_namelist_cfg ln_zdfiwm .false.
[7646]1307    set_namelist 1_namelist_cfg ln_hpg_sco .false.
1308    set_namelist 1_namelist_cfg ln_hpg_zps .true.
[5589]1309    set_namelist namelist_cfg cn_ocerst_in \"O2LP_LONG_00000075_restart\"
1310    set_namelist namelist_ice_cfg cn_icerst_in \"O2LP_LONG_00000075_restart_ice\"
1311    set_namelist 1_namelist_cfg cn_ocerst_in \"O2LP_LONG_00000150_restart\"
[8586]1312    set_namelist 1_namelist_ice_cfg cn_icerst_in \"O2LP_LONG_00000150_restart_ice\"
[5589]1313
1314    for (( i=1; i<=$NPROC; i++)) ; do
1315        L_NPROC=$(( $i - 1 ))
1316        L_NPROC=`printf "%04d\n" ${L_NPROC}`
1317        ln -sf ../LONG/O2LP_LONG_00000075_restart_${L_NPROC}.nc .
1318        ln -sf ../LONG/O2LP_LONG_00000075_restart_ice_${L_NPROC}.nc .
1319        ln -sf ../LONG/1_O2LP_LONG_00000150_restart_${L_NPROC}.nc .
[8586]1320        ln -sf ../LONG/1_O2LP_LONG_00000150_restart_ice_${L_NPROC}.nc .
[5589]1321    done
1322    if [ ${USING_MPMD} == "yes" ] ; then
1323       set_xio_using_server iodef.xml true
1324    else
1325       set_xio_using_server iodef.xml false
1326    fi
1327    cd ${SETTE_DIR}
[7753]1328    . ./prepare_job.sh input_ORCA2_LIM3_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[5589]1329    cd ${SETTE_DIR}
1330    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1331fi
1332
[7715]1333## Reproducibility tests for ORCA2_LIM3_AGRIF
1334if [ ${config} -eq 16 ] ;  then
[5589]1335    export TEST_NAME="REPRO_4_4"
[7715]1336    cd ${CONFIG_DIR0}
[8688]1337    . ./makenemo -m ${CMP_NAM} -n ORCA2AGUL_16 -r ORCA2_LIM3_PISCES -d "OPA_SRC LIM_SRC_3 NST_SRC" -j 8 add_key "key_agrif" del_key "key_top"
[5589]1338    cd ${SETTE_DIR}
1339    . ./param.cfg
1340    . ./all_functions.sh
1341    . ./prepare_exe_dir.sh
1342    JOB_FILE=${EXE_DIR}/run_job.sh
1343    NPROC=16
1344    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1345    cd ${EXE_DIR}
1346    set_namelist namelist_cfg nn_it000 1
1347    set_namelist namelist_cfg nn_itend 75
1348    set_namelist namelist_cfg ln_ctl .false.
1349    set_namelist namelist_cfg ln_clobber .true.
[7646]1350    set_namelist namelist_cfg ln_read_cfg .true.
1351    set_namelist namelist_cfg ln_linssh .true.
1352    set_namelist namelist_cfg ln_hpg_sco .false.
1353    set_namelist namelist_cfg ln_hpg_zps .true.
[5589]1354    set_namelist namelist_cfg nn_fwb 0
1355    set_namelist namelist_cfg jpni 4
1356    set_namelist namelist_cfg jpnj 4
1357    set_namelist namelist_cfg jpnij 16
1358    set_namelist 1_namelist_cfg nn_it000 1
1359    set_namelist 1_namelist_cfg nn_itend 150
[8367]1360    set_namelist 1_namelist_cfg nn_fsbc 1
[5589]1361    set_namelist 1_namelist_cfg ln_ctl .false.
1362    set_namelist 1_namelist_cfg ln_clobber .true.
[7646]1363    set_namelist 1_namelist_cfg ln_read_cfg .true.
[8735]1364    set_namelist 1_namelist_cfg ln_zdfiwm .false.
[7646]1365    set_namelist 1_namelist_cfg ln_linssh .true.
[8735]1366    set_namelist 1_namelist_cfg ln_zdfiwm .false.
[7646]1367    set_namelist 1_namelist_cfg ln_hpg_sco .false.
1368    set_namelist 1_namelist_cfg ln_hpg_zps .true.
[5589]1369
1370    if [ ${USING_MPMD} == "yes" ] ; then
1371       set_xio_using_server iodef.xml true
1372    else
1373       set_xio_using_server iodef.xml false
1374    fi
1375    cd ${SETTE_DIR}
[7753]1376    . ./prepare_job.sh input_ORCA2_LIM3_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[5589]1377    cd ${SETTE_DIR}
1378    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1379
1380    cd ${SETTE_DIR}
1381    export TEST_NAME="REPRO_2_8"
1382    . ./prepare_exe_dir.sh
1383    JOB_FILE=${EXE_DIR}/run_job.sh
1384    NPROC=16
1385    if [ -f ${JOB_FILE} ] ; then \rm ${JOB_FILE} ; fi
1386    cd ${EXE_DIR}
1387    set_namelist namelist_cfg nn_it000 1
1388    set_namelist namelist_cfg nn_itend 75
1389    set_namelist namelist_cfg ln_ctl .false.
1390    set_namelist namelist_cfg ln_clobber .true.
[7646]1391    set_namelist namelist_cfg ln_read_cfg .true.
1392    set_namelist namelist_cfg ln_linssh .true.
1393    set_namelist namelist_cfg ln_hpg_sco .false.
1394    set_namelist namelist_cfg ln_hpg_zps .true.
[5589]1395    set_namelist namelist_cfg nn_fwb 0
1396    set_namelist namelist_cfg jpni 2
1397    set_namelist namelist_cfg jpnj 8
1398    set_namelist namelist_cfg jpnij 16
1399    set_namelist 1_namelist_cfg nn_it000 1
1400    set_namelist 1_namelist_cfg nn_itend 150
1401    set_namelist 1_namelist_cfg ln_ctl .false.
[8367]1402    set_namelist 1_namelist_cfg nn_fsbc 1
[5589]1403    set_namelist 1_namelist_cfg ln_clobber .true.
[7646]1404    set_namelist 1_namelist_cfg ln_read_cfg .true.
1405    set_namelist 1_namelist_cfg ln_linssh .true.
[8735]1406    set_namelist 1_namelist_cfg ln_zdfiwm .false.
[7646]1407    set_namelist 1_namelist_cfg ln_hpg_sco .false.
1408    set_namelist 1_namelist_cfg ln_hpg_zps .true.
[5589]1409
1410    if [ ${USING_MPMD} == "yes" ] ; then
1411       set_xio_using_server iodef.xml true
1412    else
1413       set_xio_using_server iodef.xml false
1414    fi
1415    cd ${SETTE_DIR}
[7753]1416    . ./prepare_job.sh input_ORCA2_LIM3_AGRIF.cfg $NPROC ${TEST_NAME} ${MPIRUN_FLAG} ${JOB_FILE} ${NUM_XIOSERVERS}
[5589]1417    cd ${SETTE_DIR}
1418    . ./fcm_job.sh $NPROC ${JOB_FILE} ${INTERACT_FLAG} ${MPIRUN_FLAG}
1419fi
1420
[3520]1421done
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