Changeset 10279 for NEMO/trunk/README.rst
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NEMO/trunk/README.rst
r10201 r10279 1 .. include:: .global.rst 2 1 :Authors: NEMO System Team 3 2 :Release: |release| 4 3 :Date: |today| 5 6 NEMO for *Nucleus for European Modelling of the Ocean* is a state-of-the-art modelling framework of 7 ocean related engines for oceanographic research, operational oceanography, seasonal forecast and 8 [paleo]climate studies. 4 5 `NEMO`_ for *Nucleus for European Modelling of the Ocean* is a state-of-the-art modelling framework for 6 research activities and forecasting services in ocean and climate sciences. 9 7 10 8 .. contents:: … … 14 12 ======== 15 13 16 Distributed under CeCILL license (GNU GPL compatible - see ``./LICENSE``), 17 the NEMO ocean model has 3 major components: 14 The NEMO ocean model has 3 major components: 18 15 19 - :rstblue:`OPA` is fundamental to all users by modelling the ocean [thermo]dynamics and20 solving the primitive equations (``./src/OCE``); :cite:`madec_bk08`21 - :rstgrey:`SI`\ :rstgreysup:`3` for sea-ice simulates ice [thermo]dynamics, brine inclusions and22 subgrid-scale thickness variations (``./src/ICE``); :cite:`gmd-8-2991-2015,vancoppenolle200933`23 - :rstgreen:`TOP-PISCES` models biogeochemistry with TOP for the on/offline oceanic tracers transport and24 PISCES for the biogeochemical processes (``./src/MBG``). :cite:`gmd-8-2465-2015`16 - |OPA| models the ocean [thermo]dynamics and solves the primitive equations 17 (``./src/OCE``) :cite:`NEMO_manual`; 18 - |SI3| simulates ice [thermo]dynamics, brine inclusions and subgrid-scale thickness variations 19 (``./src/ICE``) :cite:`SI3_manual`; 20 - |TOP| models the [on|off]line oceanic tracers transport and the biogeochemical processes 21 (``./src/MBG``) :cite:`TOP_manual`. 25 22 26 These physical engines are described in their respective reference publicationsthat must be cited for23 These physical core engines are described in their respective <reference publications> that must be cited for 27 24 any work related to their use. 28 25 … … 33 30 it offers various features to enable 34 31 35 - 2-way nesting package `AGRIF`_ to create :doc:`embedded zooms <zooms>` seamlessly 36 - Flexible biogeochemistry with :doc:`online coarsening <coarsening>` and 37 opportunity to integrate an :doc:`alternative model <tracers>` 38 - Versatile :doc:`data assimilation interface <data_assimilation>` 32 - Create :doc:`embedded zooms <zooms>` seamlessly with 2-way nesting package `AGRIF`_. 33 - :doc:`Low cost biogeochemistry <coarsening>` and :doc:`alternative model opportunity <tracers>`. 34 - Versatile :doc:`assimilation <assimilation>`. 35 - :doc:`Output diagnostics <diagnostics>` with `XIOS`_ server. 36 - :doc:`Coupling <coupling>` via `OASIS`_ for Earth system modelling. 39 37 40 lation a efficient XIOS_ server for outputing diagnostics a coupled via OASIS_ to alternative components or other models to enable Earth system modelling. 41 42 | Several :doc:`builtins configurations <reference_configurations>` are provided to assess the skills and 43 performances of the model which can be used as templates for setting up a new configuration (``./cfgs``). 44 | The end user could also find some :doc:`idealised test cases <test_cases>` on the web to serve as examples and 38 | Several :doc:`builtins configurations <configurations>` are provided to assess the skills and performances of 39 the model which can be used as templates for :doc:`setting up a new configuration <setup>` (``./cfgs``). 40 | The end user could also find some :doc:`idealised test cases <test_cases>` online to serve as templates and 45 41 to study particular processes (``./tests``). 46 42 47 A set of tools is also provided to setup your own configuration and[pre|post]process your data (``./tools``).43 A set of :doc:`utilities <tools>` is also provided to [pre|post]process your data (``./tools``). 48 44 49 45 Literature 50 46 ========== 51 47 52 | The NEMO reference manual and a quick start guide can be generated from Latex and RST source code files 53 (``./doc``), either in PDF or in HTML format, but it might require some additional installations. 54 | In any case, both formats are available online: `HTML`_ | `PDF`_ 48 :doc:`install` 55 49 56 | Since 2014 the project has a `Special Issue`_ in the open-access journal Geoscientific Model Development (GMD) 57 from the European Geosciences Union (EGU). 58 The main scope is to collect relevant manuscripts which cover a wide variety of topics like 59 process studies, new parameterizations, implementation of new model features and new NEMO configurations. 60 | Also it provides a single portal to search, discover and understand about 61 the NEMO modelling framework potential and evolution and to submit their contributions. 50 The reference documentation is archived online 51 52 +-------+-------------------+----------------+ 53 | | Reference manual | |NEMO manual|_ | 54 | |OPA| +-------------------+----------------+ 55 | | Quick start guide | |NEMO guide|_ | 56 +-------+-------------------+----------------+ 57 | |SI3| | |SI3 manual|_ | 58 +---------------------------+----------------+ 59 | |TOP| | |TOP manual|_ | 60 +---------------------------+----------------+ 61 62 .. |NEMO manual| image:: http://zenodo.org/badge/DOI/10.5281/zenodo.1464816.svg 63 .. |NEMO guide| image:: http://zenodo.org/badge/DOI/10.5281/zenodo.1475325.svg 64 .. |SI3 manual| image:: http://zenodo.org/badge/DOI/10.5281/zenodo.1471689.svg 65 .. |TOP manual| image:: http://zenodo.org/badge/DOI/10.5281/zenodo.1471700.svg 66 67 | Reference manuals and quick start guide can be build from source and exported to HTML or PDF (``./doc``). 68 | In any case, one can find them online: 69 70 Since 2014 the project has a `Special Issue <http://www.geosci-model-dev.net/special_issue40.html>`_ in 71 the open-access journal Geoscientific Model Development (GMD) from the European Geosciences Union (EGU). 72 The main scope is to collect relevant manuscripts covering various topics and to provide a single portal to 73 assess the model potential and evolution. 74 75 Used by a wide audience, numerous :website:`associated projects <projects>` have been carried out and 76 extensive :website:`bibliography <bibliography/publications>` published. 62 77 63 78 Community development 64 79 ===================== 65 80 66 | The NEMO Consortium gathering 6 European institutes (`CMCC`_, `CNRS`_, `MOI`_, `Met Office`_ and `NERC`_) 67 organises the sustainable development in order to keep a reliable evolving system since 2008. 68 | It defines the multi-year development strategy which is implemented by the NEMO System Team. 81 | The NEMO Consortium pulling together 5 European institutes (`CMCC`_, `CNRS`_, `MOI`_, `Met Office`_ and `NERC`_) 82 plans the sustainable development in order to keep a reliable evolving framework since 2008. 83 | It defines the |NEMO strategy|_ which is implemented by the System Team on 84 a yearly basis in order to release a new version almost every four years. 69 85 70 When the need arises, `Working Groups`_ are created or resumed to gather the expertise in the community in order to 71 focus the development work on a specific subject or major component of the framework. 86 .. |NEMO strategy| replace:: multi-year development strategy 72 87 73 How to cite NEMO 74 ================ 75 76 .. bibliography:: references.bib 77 :all: 78 :style: unsrt 79 80 .. _HTML: http://www.nemo-ocean.eu/doc 81 .. _PDF: http://www.nemo-ocean.eu/wp-content/uploads/NEMO_book.pdf 88 When the need arises, :forge:`working groups <wiki/WorkingGroups>` are created or resumed to 89 gather the community expertise for advising on the development activities.
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