Changeset 11123 for NEMO/trunk/doc/latex/NEMO/subfiles/introduction.tex

Timestamp:

2019-06-17T14:22:27+02:00 (5 years ago)

Author:

nicolasmartin

Message:

Modification of LaTeX subfiles accordingly to new citations keys

Location:

NEMO/trunk/doc/latex/NEMO/subfiles

Files:

• . (modified) (1 prop)
• introduction.tex (modified) (10 diffs)

NEMO/trunk/doc/latex/NEMO/subfiles/introduction.tex

@@ -27 +27 @@
 
 The ocean component of \NEMO has been developed from the legacy of the OPA model, release 8.2, 
-described in \citet{Madec1998}.
+described in \citet{madec.delecluse.ea_NPM98}.
 This model has been used for a wide range of applications, both regional or global, as a forced ocean model and 
 as a model coupled with the sea-ice and/or the atmosphere.
@@ -67 +67 @@
 Within the \NEMO system the ocean model is interactively coupled with a sea ice model (SI$^3$) and
 a biogeochemistry model (PISCES).
-Interactive coupling to Atmospheric models is possible via the OASIS coupler \citep{OASIS2006}.
+Interactive coupling to Atmospheric models is possible via the \href{https://portal.enes.org/oasis}{OASIS coupler}.
 Two-way nesting is also available through an interface to the AGRIF package
-(Adaptative Grid Refinement in \fortran) \citep{Debreu_al_CG2008}.
+(Adaptative Grid Refinement in \fortran) \citep{debreu.vouland.ea_CG08}.
 % Needs to be reviewed
 %The interface code for coupling to an alternative sea ice model (CICE, \citet{Hunke2008}) has now been upgraded so
@@ -83 +83 @@
 The lateral Laplacian and biharmonic viscosity and diffusion can be rotated following
 a geopotential or neutral direction.
-There is an optional eddy induced velocity \citep{Gent1990} with a space and time variable coefficient
-\citet{Treguier1997}.
+There is an optional eddy induced velocity \citep{gent.mcwilliams_JPO90} with a space and time variable coefficient
+\citet{treguier.held.ea_JPO97}.
 The model has vertical harmonic viscosity and diffusion with a space and time variable coefficient,
-with options to compute the coefficients with \citet{Blanke1993}, \citet{Pacanowski_Philander_JPO81}, or 
-\citet{Umlauf_Burchard_JMS03} mixing schemes.
+with options to compute the coefficients with \citet{blanke.delecluse_JPO93}, \citet{pacanowski.philander_JPO81}, or 
+\citet{umlauf.burchard_JMR03} mixing schemes.
  
 %%gm    To be put somewhere else ....
@@ -213 +213 @@
 NEMO/OPA, like all research tools, is in perpetual evolution.
 The present document describes the OPA version include in the release 3.4 of NEMO.
-This release differs significantly from version 8, documented in \citet{Madec1998}. \\
+This release differs significantly from version 8, documented in \citet{madec.delecluse.ea_NPM98}. \\
 
 The main modifications from OPA v8 and NEMO/OPA v3.2 are :
@@ -222 +222 @@
 \item
   introduction of partial step representation of bottom topography
-  \citep{Barnier_al_OD06, Le_Sommer_al_OM09, Penduff_al_OS07};
+  \citep{barnier.madec.ea_OD06, le-sommer.penduff.ea_OM09, penduff.le-sommer.ea_OS07};
 \item
   partial reactivation of a terrain-following vertical coordinate ($s$- and hybrid $s$-$z$) with
@@ -242 +242 @@
   additional advection schemes for tracers;
 \item
-  implementation of the AGRIF package (Adaptative Grid Refinement in \fortran) \citep{Debreu_al_CG2008};
+  implementation of the AGRIF package (Adaptative Grid Refinement in \fortran) \citep{debreu.vouland.ea_CG08};
 \item
   online diagnostics : tracers trend in the mixed layer and vorticity balance;
@@ -255 +255 @@
   RGB light penetration and optional use of ocean color 
 \item
-  major changes in the TKE schemes: it now includes a Langmuir cell parameterization \citep{Axell_JGR02},
-  the \citet{Mellor_Blumberg_JPO04} surface wave breaking parameterization, and has a time discretization which
-  is energetically consistent with the ocean model equations \citep{Burchard_OM02, Marsaleix_al_OM08};
+  major changes in the TKE schemes: it now includes a Langmuir cell parameterization \citep{axell_JGR02},
+  the \citet{mellor.blumberg_JPO04} surface wave breaking parameterization, and has a time discretization which
+  is energetically consistent with the ocean model equations \citep{burchard_OM02, marsaleix.auclair.ea_OM08};
 \item
   tidal mixing parametrisation (bottom intensification) + Indonesian specific tidal mixing
-  \citep{Koch-Larrouy_al_GRL07};
+  \citep{koch-larrouy.madec.ea_GRL07};
 \item
   introduction of LIM-3, the new Louvain-la-Neuve sea-ice model
   (C-grid rheology and new thermodynamics including bulk ice salinity)
-  \citep{Vancoppenolle_al_OM09a, Vancoppenolle_al_OM09b}
+  \citep{vancoppenolle.fichefet.ea_OM09*a, vancoppenolle.fichefet.ea_OM09*b}
 \end{itemize}
 
@@ -272 +272 @@
 \item
   introduction of a modified leapfrog-Asselin filter time stepping scheme
-  \citep{Leclair_Madec_OM09}; 
-\item
-  additional scheme for iso-neutral mixing \citep{Griffies_al_JPO98}, although it is still a "work in progress";
-\item
-  a rewriting of the bottom boundary layer scheme, following \citet{Campin_Goosse_Tel99};
-\item
-  addition of a Generic Length Scale vertical mixing scheme, following \citet{Umlauf_Burchard_JMS03};
+  \citep{leclair.madec_OM09}; 
+\item
+  additional scheme for iso-neutral mixing \citep{griffies.gnanadesikan.ea_JPO98}, although it is still a "work in progress";
+\item
+  a rewriting of the bottom boundary layer scheme, following \citet{campin.goosse_T99};
+\item
+  addition of a Generic Length Scale vertical mixing scheme, following \citet{umlauf.burchard_JMR03};
 \item
   addition of the atmospheric pressure as an external forcing on both ocean and sea-ice dynamics;
 \item
-  addition of a diurnal cycle on solar radiation \citep{Bernie_al_CD07};
+  addition of a diurnal cycle on solar radiation \citep{bernie.guilyardi.ea_CD07};
 \item
   river runoffs added through a non-zero depth, and having its own temperature and salinity;
@@ -296 +296 @@
   coupling interface adjusted for WRF atmospheric model;
 \item
-  C-grid ice rheology now available fro both LIM-2 and LIM-3 \citep{Bouillon_al_OM09};
+  C-grid ice rheology now available fro both LIM-2 and LIM-3 \citep{bouillon.maqueda.ea_OM09};
 \item
   LIM-3 ice-ocean momentum coupling applied to LIM-2;
@@ -318 +318 @@
 
 \begin{itemize}
-\item finalisation of above iso-neutral mixing \citep{Griffies_al_JPO98}";
+\item finalisation of above iso-neutral mixing \citep{griffies.gnanadesikan.ea_JPO98}";
 \item "Neptune effect" parametrisation;
 \item horizontal pressure gradient suitable for s-coordinate;