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Changeset 11512 for NEMO/branches/2019/dev_r10984_HPC-13_IRRMANN_BDY_optimization/doc/latex/NEMO/subfiles/annex_E.tex – NEMO

Ignore:
Timestamp:
2019-09-09T12:05:20+02:00 (5 years ago)
Author:
smasson
Message:

dev_r10984_HPC-13 : merge with trunk@11511, see #2285

File:
1 edited

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  • NEMO/branches/2019/dev_r10984_HPC-13_IRRMANN_BDY_optimization/doc/latex/NEMO/subfiles/annex_E.tex

    r11263 r11512  
    88\label{apdx:E} 
    99 
    10 \minitoc 
     10\chaptertoc 
    1111 
    1212\newpage 
     
    4848$\tau "_i =\frac{e_{1T}}{e_{2T}\,e_{3T}}\delta_i \left[ \frac{e_{2u} e_{3u} }{e_{1u} }\delta_{i+1/2}[\tau] \right]$. 
    4949 
    50 This results in a dissipatively dominant (\ie hyper-diffusive) truncation error 
     50This results in a dissipatively dominant (\ie\ hyper-diffusive) truncation error 
    5151\citep{shchepetkin.mcwilliams_OM05}. 
    5252The overall performance of the advection scheme is similar to that reported in \cite{farrow.stevens_JPO95}. 
     
    135135\end{equation} 
    136136with ${A_u^{lT}}^2 = \frac{1}{12} {e_{1u}}^3\ |u|$,  
    137 \ie $A_u^{lT} = \frac{1}{\sqrt{12}} \,e_{1u}\ \sqrt{ e_{1u}\,|u|\,}$ 
     137\ie\ $A_u^{lT} = \frac{1}{\sqrt{12}} \,e_{1u}\ \sqrt{ e_{1u}\,|u|\,}$ 
    138138it comes: 
    139139\begin{equation} 
     
    147147  \end{split} 
    148148\end{equation} 
    149 if the velocity is uniform (\ie $|u|=cst$) then the diffusive flux is 
     149if the velocity is uniform (\ie\ $|u|=cst$) then the diffusive flux is 
    150150\begin{equation} 
    151151  \label{eq:tra_ldf_lap} 
     
    166166  \end{split} 
    167167\end{equation} 
    168 if the velocity is uniform (\ie $|u|=cst$) and 
     168if the velocity is uniform (\ie\ $|u|=cst$) and 
    169169choosing $\tau "_i =\frac{e_{1T}}{e_{2T}\,e_{3T}}\delta_i \left[ \frac{e_{2u} e_{3u} }{e_{1u} } \delta_{i+1/2}[\tau] \right]$ 
    170170 
     
    218218not $2\rdt$ as it can be found sometimes in literature. 
    219219The leap-Frog time stepping is a second order centered scheme. 
    220 As such it respects the quadratic invariant in integral forms, \ie the following continuous property, 
     220As such it respects the quadratic invariant in integral forms, \ie\ the following continuous property, 
    221221\[ 
    222222  % \label{eq:Energy} 
     
    256256 
    257257Let try to define a scheme that get its inspiration from the \citet{griffies.gnanadesikan.ea_JPO98} scheme, 
    258 but is formulated within the \NEMO framework 
    259 (\ie using scale factors rather than grid-size and having a position of $T$-points that 
     258but is formulated within the \NEMO\ framework 
     259(\ie\ using scale factors rather than grid-size and having a position of $T$-points that 
    260260is not necessary in the middle of vertical velocity points, see \autoref{fig:zgr_e3}). 
    261261 
     
    271271(see \autoref{chap:LDF}). 
    272272Nevertheless, this technique works fine for $T$ and $S$ as they are active tracers 
    273 (\ie they enter the computation of density), but it does not work for a passive tracer. 
     273(\ie\ they enter the computation of density), but it does not work for a passive tracer. 
    274274\citep{griffies.gnanadesikan.ea_JPO98} introduce a different way to discretise the off-diagonal terms that 
    275275nicely solve the problem. 
     
    386386\item[$\bullet$ implicit treatment in the vertical] 
    387387  In the diagonal term associated with the vertical divergence of the iso-neutral fluxes 
    388   \ie the term associated with a second order vertical derivative) 
     388  \ie\ the term associated with a second order vertical derivative) 
    389389  appears only tracer values associated with a single water column. 
    390390  This is of paramount importance since it means that 
     
    431431It is a key property for a diffusion term. 
    432432It means that the operator is also a dissipation term, 
    433 \ie it is a sink term for the square of the quantity on which it is applied. 
     433\ie\ it is a sink term for the square of the quantity on which it is applied. 
    434434It therfore ensures that, when the diffusivity coefficient is large enough, 
    435435the field on which it is applied become free of grid-point noise. 
     
    457457the formulation of which depends on the slopes of iso-neutral surfaces. 
    458458Contrary to the case of iso-neutral mixing, the slopes used here are referenced to the geopotential surfaces, 
    459 \ie \autoref{eq:ldfslp_geo} is used in $z$-coordinate, 
     459\ie\ \autoref{eq:ldfslp_geo} is used in $z$-coordinate, 
    460460and the sum \autoref{eq:ldfslp_geo} + \autoref{eq:ldfslp_iso} in $z^*$ or $s$-coordinates.  
    461461 
     
    578578Nevertheless this property can be used to choose a discret form of \autoref{eq:eiv_skew_continuous} which 
    579579is consistent with the iso-neutral operator \autoref{eq:Gf_operator}. 
    580 Using the slopes \autoref{eq:Gf_slopes} and defining $A_e$ at $T$-point(\ie as $A$, 
     580Using the slopes \autoref{eq:Gf_slopes} and defining $A_e$ at $T$-point(\ie\ as $A$, 
    581581the eddy diffusivity coefficient), the resulting discret form is given by: 
    582582\begin{equation} 
     
    600600it uses the same definition for the slopes. 
    601601It also ensures the conservation of the tracer variance (see Appendix \autoref{apdx:eiv_skew}), 
    602 \ie it does not include a diffusive component but is a "pure" advection term. 
     602\ie\ it does not include a diffusive component but is a "pure" advection term. 
    603603 
    604604$\ $\newpage      %force an empty line 
     
    840840Exactly the same thing occurs for the triad ${_i^k \mathbb{R}_{-1/2}^{+1/2}}$ in the $i$ direction. 
    841841Therefore the sum over the domain is zero, 
    842 \ie the variance of the tracer is preserved by the discretisation of the skew fluxes. 
     842\ie\ the variance of the tracer is preserved by the discretisation of the skew fluxes. 
    843843 
    844844\biblio 
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