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Changeset 11558 for NEMO/trunk/doc/latex/NEMO/subfiles/chap_DYN.tex – NEMO

Ignore:
Timestamp:
2019-09-17T17:04:06+02:00 (5 years ago)
Author:
nicolasmartin
Message:

Review all figure envs + activation of listoflistings

  1. Figure env:
    • Replace center sub-env with only \centering cmd
    • Add alternate caption for \listoffigures (shorter one between square brackets, i.e. \caption[]{})
    • Place \label outside of \caption and remove useless \protect
  1. Namelist listings
    • Put \nlst with the namelist inlcusion in a listing float env with caption and label
    • Remove namelist duplicates

-- This line, and those below, will be ignored--
M subfiles/apdx_triads.tex
M subfiles/chap_model_basics_zstar.tex
M subfiles/chap_SBC.tex
M subfiles/apdx_DOMAINcfg.tex
M subfiles/apdx_s_coord.tex
M subfiles/chap_DOM.tex
M subfiles/chap_ASM.tex
M subfiles/chap_DIU.tex
M subfiles/chap_cfgs.tex
M subfiles/chap_ZDF.tex
M subfiles/chap_OBS.tex
M subfiles/chap_model_basics.tex
M subfiles/chap_time_domain.tex
M subfiles/apdx_algos.tex
M subfiles/chap_TRA.tex
M subfiles/chap_DYN.tex
M subfiles/chap_misc.tex
M subfiles/chap_DIA.tex
M subfiles/apdx_invariants.tex
M subfiles/chap_LBC.tex
M subfiles/apdx_diff_opers.tex
M subfiles/chap_STO.tex
M subfiles/chap_LDF.tex

File:
1 edited

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  • NEMO/trunk/doc/latex/NEMO/subfiles/chap_DYN.tex

    r11552 r11558  
    166166%-----------------------------------------nam_dynadv---------------------------------------------------- 
    167167 
    168 \nlst{namdyn_adv} 
     168\begin{listing} 
     169  \nlst{namdyn_adv} 
     170  \caption{\texttt{namdyn\_adv}} 
     171  \label{lst:namdyn_adv} 
     172\end{listing} 
    169173%------------------------------------------------------------------------------------------------------------- 
    170174 
    … …  
    185189%------------------------------------------nam_dynvor---------------------------------------------------- 
    186190 
    187 \nlst{namdyn_vor} 
     191\begin{listing} 
     192  \nlst{namdyn_vor} 
     193  \caption{\texttt{namdyn\_vor}} 
     194  \label{lst:namdyn_vor} 
     195\end{listing} 
    188196%------------------------------------------------------------------------------------------------------------- 
    189197 
    … …  
    308316%>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 
    309317\begin{figure}[!ht] 
    310   \begin{center} 
    311     \includegraphics[width=\textwidth]{Fig_DYN_een_triad} 
    312     \caption{ 
    313       \protect\label{fig:DYN_een_triad} 
    314       Triads used in the energy and enstrophy conserving scheme (een) for 
    315       $u$-component (upper panel) and $v$-component (lower panel). 
    316     } 
    317   \end{center} 
     318  \centering 
     319  \includegraphics[width=\textwidth]{Fig_DYN_een_triad} 
     320  \caption[Triads used in the energy and enstrophy conserving scheme (EEN)]{ 
     321    Triads used in the energy and enstrophy conserving scheme (EEN) for 
     322    $u$-component (upper panel) and $v$-component (lower panel).} 
     323  \label{fig:DYN_een_triad} 
    318324\end{figure} 
    319325% >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 
    … …  
    416422%------------------------------------------nam_dynadv---------------------------------------------------- 
    417423 
    418 \nlst{namdyn_adv} 
    419424%------------------------------------------------------------------------------------------------------------- 
    420425 
    … …  
    564569%------------------------------------------nam_dynhpg--------------------------------------------------- 
    565570 
    566 \nlst{namdyn_hpg} 
     571\begin{listing} 
     572  \nlst{namdyn_hpg} 
     573  \caption{\texttt{namdyn\_hpg}} 
     574  \label{lst:namdyn_hpg} 
     575\end{listing} 
    567576%------------------------------------------------------------------------------------------------------------- 
    568577 
    … …  
    778787%-----------------------------------------nam_dynspg---------------------------------------------------- 
    779788 
    780 \nlst{namdyn_spg} 
     789\begin{listing} 
     790  \nlst{namdyn_spg} 
     791  \caption{\texttt{namdyn\_spg}} 
     792  \label{lst:namdyn_spg} 
     793\end{listing} 
    781794%------------------------------------------------------------------------------------------------------------ 
    782795 
    … …  
    884897%>   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   > 
    885898\begin{figure}[!t] 
    886   \begin{center} 
    887     \includegraphics[width=\textwidth]{Fig_DYN_dynspg_ts} 
    888     \caption{ 
    889       \protect\label{fig:DYN_spg_ts} 
    890       Schematic of the split-explicit time stepping scheme for the external and internal modes. 
    891       Time increases to the right. In this particular exemple, 
    892       a boxcar averaging window over $nn\_baro$ barotropic time steps is used ($nn\_bt\_flt=1$) and $nn\_baro=5$. 
    893       Internal mode time steps (which are also the model time steps) are denoted by $t-\rdt$, $t$ and $t+\rdt$. 
    894       Variables with $k$ superscript refer to instantaneous barotropic variables, 
    895       $< >$ and $<< >>$ operator refer to time filtered variables using respectively primary (red vertical bars) and 
    896       secondary weights (blue vertical bars). 
    897       The former are used to obtain time filtered quantities at $t+\rdt$ while 
    898       the latter are used to obtain time averaged transports to advect tracers. 
    899       a) Forward time integration: \protect\np{ln\_bt\_fw}\forcode{=.true.}, 
    900       \protect\np{ln\_bt\_av}\forcode{=.true.}. 
    901       b) Centred time integration: \protect\np{ln\_bt\_fw}\forcode{=.false.}, 
    902       \protect\np{ln\_bt\_av}\forcode{=.true.}. 
    903       c) Forward time integration with no time filtering (POM-like scheme): 
    904       \protect\np{ln\_bt\_fw}\forcode{=.true.}, \protect\np{ln\_bt\_av}\forcode{=.false.}. 
    905     } 
    906   \end{center} 
     899  \centering 
     900  \includegraphics[width=\textwidth]{Fig_DYN_dynspg_ts} 
     901  \caption[Split-explicit time stepping scheme for the external and internal modes]{ 
     902    Schematic of the split-explicit time stepping scheme for the external and internal modes. 
     903    Time increases to the right. 
     904    In this particular exemple, 
     905    a boxcar averaging window over \np{nn\_baro} barotropic time steps is used 
     906    (\np{nn\_bt\_flt}\forcode{=1}) and \np{nn\_baro}\forcode{=5}. 
     907    Internal mode time steps (which are also the model time steps) are denoted by 
     908    $t-\rdt$, $t$ and $t+\rdt$. 
     909    Variables with $k$ superscript refer to instantaneous barotropic variables, 
     910    $< >$ and $<< >>$ operator refer to time filtered variables using respectively primary 
     911    (red vertical bars) and secondary weights (blue vertical bars). 
     912    The former are used to obtain time filtered quantities at $t+\rdt$ while 
     913    the latter are used to obtain time averaged transports to advect tracers. 
     914    a) Forward time integration: 
     915    \protect\np{ln\_bt\_fw}\forcode{=.true.},  \protect\np{ln\_bt\_av}\forcode{=.true.}. 
     916    b) Centred time integration: 
     917    \protect\np{ln\_bt\_fw}\forcode{=.false.}, \protect\np{ln\_bt\_av}\forcode{=.true.}. 
     918    c) Forward time integration with no time filtering (POM-like scheme): 
     919    \protect\np{ln\_bt\_fw}\forcode{=.true.},  \protect\np{ln\_bt\_av}\forcode{=.false.}.} 
     920  \label{fig:DYN_spg_ts} 
    907921\end{figure} 
    908922%>   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   >   > 
    … …  
    11141128%------------------------------------------nam_dynldf---------------------------------------------------- 
    11151129 
    1116 \nlst{namdyn_ldf} 
     1130\begin{listing} 
     1131  \nlst{namdyn_ldf} 
     1132  \caption{\texttt{namdyn\_ldf}} 
     1133  \label{lst:namdyn_ldf} 
     1134\end{listing} 
    11171135%------------------------------------------------------------------------------------------------------------- 
    11181136 
    … …  
    12451263%----------------------------------------------namzdf------------------------------------------------------ 
    12461264 
    1247 \nlst{namzdf} 
    12481265%------------------------------------------------------------------------------------------------------------- 
    12491266 
    … …  
    13321349by setting $\mathrm{ln\_wd\_dl} = \mathrm{.true.}$ and $\mathrm{ln\_wd\_il} = \mathrm{.false.}$. 
    13331350 
    1334 \nlst{namwad} 
     1351\begin{listing} 
     1352  \nlst{namwad} 
     1353  \caption{\texttt{namwad}} 
     1354  \label{lst:namwad} 
     1355\end{listing} 
    13351356 
    13361357The following terminology is used. The depth of the topography (positive downwards) 
    … …  
    15411562neighbouring $(i+1,j)$ and $(i,j)$ tracer points.  zcpx is calculated using two logicals 
    15421563variables, $\mathrm{ll\_tmp1}$ and $\mathrm{ll\_tmp2}$ which are evaluated for each grid 
    1543 column.  The three possible combinations are illustrated in figure \autoref{fig:DYN_WAD_dynhpg}. 
     1564column.  The three possible combinations are illustrated in \autoref{fig:DYN_WAD_dynhpg}. 
    15441565 
    15451566%>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 
    1546 \begin{figure}[!ht] \begin{center} 
    1547 \includegraphics[width=\textwidth]{Fig_WAD_dynhpg} 
    1548 \caption{ 
     1567\begin{figure}[!ht] 
     1568  \centering 
     1569  \includegraphics[width=\textwidth]{Fig_WAD_dynhpg} 
     1570  \caption[Combinations controlling the limiting of the horizontal pressure gradient in 
     1571  wetting and drying regimes]{ 
     1572    Three possible combinations of the logical variables controlling the 
     1573    limiting of the horizontal pressure gradient in wetting and drying regimes} 
    15491574  \label{fig:DYN_WAD_dynhpg} 
    1550   Illustrations of the three possible combinations of the logical variables controlling the 
    1551   limiting of the horizontal pressure gradient in wetting and drying regimes} 
    1552 \end{center} 
    15531575\end{figure} 
    15541576%>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> 
    … …  
    16251647%----------------------------------------------namdom---------------------------------------------------- 
    16261648 
    1627 \nlst{namdom} 
    16281649%------------------------------------------------------------------------------------------------------------- 
    16291650 
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