Changeset 11565 for NEMO/trunk/doc/latex/NEMO/subfiles/chap_TRA.tex
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- 2019-09-18T16:58:58+02:00 (5 years ago)
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NEMO/trunk/doc/latex/NEMO/subfiles/chap_TRA.tex
r11561 r11565 60 60 % Tracer Advection 61 61 % ================================================================ 62 \section[Tracer advection (\textit{traadv.F90})] 63 {Tracer advection (\protect\mdl{traadv})} 62 \section[Tracer advection (\textit{traadv.F90})]{Tracer advection (\protect\mdl{traadv})} 64 63 \label{sec:TRA_adv} 65 64 %------------------------------------------namtra_adv----------------------------------------------------- … … 186 185 % 2nd and 4th order centred schemes 187 186 % ------------------------------------------------------------------------------------------------------------- 188 \subsection[CEN: Centred scheme (\forcode{ln_traadv_cen=.true.})] 189 {CEN: Centred scheme (\protect\np{ln\_traadv\_cen}\forcode{=.true.})} 187 \subsection[CEN: Centred scheme (\forcode{ln_traadv_cen})]{CEN: Centred scheme (\protect\np{ln\_traadv\_cen})} 190 188 \label{subsec:TRA_adv_cen} 191 189 … … 254 252 % FCT scheme 255 253 % ------------------------------------------------------------------------------------------------------------- 256 \subsection[FCT: Flux Corrected Transport scheme (\forcode{ln_traadv_fct=.true.})] 257 {FCT: Flux Corrected Transport scheme (\protect\np{ln\_traadv\_fct}\forcode{=.true.})} 254 \subsection[FCT: Flux Corrected Transport scheme (\forcode{ln_traadv_fct})]{FCT: Flux Corrected Transport scheme (\protect\np{ln\_traadv\_fct})} 258 255 \label{subsec:TRA_adv_tvd} 259 256 … … 298 295 % MUSCL scheme 299 296 % ------------------------------------------------------------------------------------------------------------- 300 \subsection[MUSCL: Monotone Upstream Scheme for Conservative Laws (\forcode{ln_traadv_mus=.true.})] 301 {MUSCL: Monotone Upstream Scheme for Conservative Laws (\protect\np{ln\_traadv\_mus}\forcode{=.true.})} 297 \subsection[MUSCL: Monotone Upstream Scheme for Conservative Laws (\forcode{ln_traadv_mus})]{MUSCL: Monotone Upstream Scheme for Conservative Laws (\protect\np{ln\_traadv\_mus})} 302 298 \label{subsec:TRA_adv_mus} 303 299 … … 335 331 % UBS scheme 336 332 % ------------------------------------------------------------------------------------------------------------- 337 \subsection[UBS a.k.a. UP3: Upstream-Biased Scheme (\forcode{ln_traadv_ubs=.true.})] 338 {UBS a.k.a. UP3: Upstream-Biased Scheme (\protect\np{ln\_traadv\_ubs}\forcode{=.true.})} 333 \subsection[UBS a.k.a. UP3: Upstream-Biased Scheme (\forcode{ln_traadv_ubs})]{UBS a.k.a. UP3: Upstream-Biased Scheme (\protect\np{ln\_traadv\_ubs})} 339 334 \label{subsec:TRA_adv_ubs} 340 335 … … 408 403 % QCK scheme 409 404 % ------------------------------------------------------------------------------------------------------------- 410 \subsection[QCK: QuiCKest scheme (\forcode{ln_traadv_qck=.true.})] 411 {QCK: QuiCKest scheme (\protect\np{ln\_traadv\_qck}\forcode{=.true.})} 405 \subsection[QCK: QuiCKest scheme (\forcode{ln_traadv_qck})]{QCK: QuiCKest scheme (\protect\np{ln\_traadv\_qck})} 412 406 \label{subsec:TRA_adv_qck} 413 407 … … 432 426 % Tracer Lateral Diffusion 433 427 % ================================================================ 434 \section[Tracer lateral diffusion (\textit{traldf.F90})] 435 {Tracer lateral diffusion (\protect\mdl{traldf})} 428 \section[Tracer lateral diffusion (\textit{traldf.F90})]{Tracer lateral diffusion (\protect\mdl{traldf})} 436 429 \label{sec:TRA_ldf} 437 430 %-----------------------------------------nam_traldf------------------------------------------------------ … … 465 458 % Type of operator 466 459 % ------------------------------------------------------------------------------------------------------------- 467 \subsection[Type of operator (\texttt{ln\_traldf}\{\texttt{\_OFF,\_lap,\_blp}\})] 468 {Type of operator (\protect\np{ln\_traldf\_OFF}, \protect\np{ln\_traldf\_lap}, or \protect\np{ln\_traldf\_blp}) } 460 \subsection[Type of operator (\texttt{ln\_traldf}\{\texttt{\_OFF,\_lap,\_blp}\})]{Type of operator (\protect\np{ln\_traldf\_OFF}, \protect\np{ln\_traldf\_lap}, or \protect\np{ln\_traldf\_blp})} 469 461 \label{subsec:TRA_ldf_op} 470 462 … … 500 492 % Direction of action 501 493 % ------------------------------------------------------------------------------------------------------------- 502 \subsection[Action direction (\texttt{ln\_traldf}\{\texttt{\_lev,\_hor,\_iso,\_triad}\})] 503 {Direction of action (\protect\np{ln\_traldf\_lev}, \protect\np{ln\_traldf\_hor}, \protect\np{ln\_traldf\_iso}, or \protect\np{ln\_traldf\_triad}) } 494 \subsection[Action direction (\texttt{ln\_traldf}\{\texttt{\_lev,\_hor,\_iso,\_triad}\})]{Direction of action (\protect\np{ln\_traldf\_lev}, \protect\np{ln\_traldf\_hor}, \protect\np{ln\_traldf\_iso}, or \protect\np{ln\_traldf\_triad})} 504 495 \label{subsec:TRA_ldf_dir} 505 496 … … 527 518 % iso-level operator 528 519 % ------------------------------------------------------------------------------------------------------------- 529 \subsection[Iso-level (bi-)laplacian operator (\texttt{ln\_traldf\_iso})] 530 {Iso-level (bi-)laplacian operator ( \protect\np{ln\_traldf\_iso})} 520 \subsection[Iso-level (bi-)laplacian operator (\texttt{ln\_traldf\_iso})]{Iso-level (bi-)laplacian operator ( \protect\np{ln\_traldf\_iso})} 531 521 \label{subsec:TRA_ldf_lev} 532 522 … … 564 554 %&& Standard rotated (bi-)laplacian operator 565 555 %&& ---------------------------------------------- 566 \subsubsection[Standard rotated (bi-)laplacian operator (\textit{traldf\_iso.F90})] 567 {Standard rotated (bi-)laplacian operator (\protect\mdl{traldf\_iso})} 556 \subsubsection[Standard rotated (bi-)laplacian operator (\textit{traldf\_iso.F90})]{Standard rotated (bi-)laplacian operator (\protect\mdl{traldf\_iso})} 568 557 \label{subsec:TRA_ldf_iso} 569 558 The general form of the second order lateral tracer subgrid scale physics (\autoref{eq:MB_zdf}) … … 608 597 %&& Triad rotated (bi-)laplacian operator 609 598 %&& ------------------------------------------- 610 \subsubsection[Triad rotated (bi-)laplacian operator (\textit{ln\_traldf\_triad})] 611 {Triad rotated (bi-)laplacian operator (\protect\np{ln\_traldf\_triad})} 599 \subsubsection[Triad rotated (bi-)laplacian operator (\textit{ln\_traldf\_triad})]{Triad rotated (bi-)laplacian operator (\protect\np{ln\_traldf\_triad})} 612 600 \label{subsec:TRA_ldf_triad} 613 601 … … 641 629 % Tracer Vertical Diffusion 642 630 % ================================================================ 643 \section[Tracer vertical diffusion (\textit{trazdf.F90})] 644 {Tracer vertical diffusion (\protect\mdl{trazdf})} 631 \section[Tracer vertical diffusion (\textit{trazdf.F90})]{Tracer vertical diffusion (\protect\mdl{trazdf})} 645 632 \label{sec:TRA_zdf} 646 633 %--------------------------------------------namzdf--------------------------------------------------------- … … 685 672 % surface boundary condition 686 673 % ------------------------------------------------------------------------------------------------------------- 687 \subsection[Surface boundary condition (\textit{trasbc.F90})] 688 {Surface boundary condition (\protect\mdl{trasbc})} 674 \subsection[Surface boundary condition (\textit{trasbc.F90})]{Surface boundary condition (\protect\mdl{trasbc})} 689 675 \label{subsec:TRA_sbc} 690 676 … … 759 745 % Solar Radiation Penetration 760 746 % ------------------------------------------------------------------------------------------------------------- 761 \subsection[Solar radiation penetration (\textit{traqsr.F90})] 762 {Solar radiation penetration (\protect\mdl{traqsr})} 747 \subsection[Solar radiation penetration (\textit{traqsr.F90})]{Solar radiation penetration (\protect\mdl{traqsr})} 763 748 \label{subsec:TRA_qsr} 764 749 %--------------------------------------------namqsr-------------------------------------------------------- … … 883 868 % Bottom Boundary Condition 884 869 % ------------------------------------------------------------------------------------------------------------- 885 \subsection[Bottom boundary condition (\textit{trabbc.F90}) - \forcode{ln_trabbc=.true.})] 886 {Bottom boundary condition (\protect\mdl{trabbc})} 870 \subsection[Bottom boundary condition (\textit{trabbc.F90}) - \forcode{ln_trabbc})]{Bottom boundary condition (\protect\mdl{trabbc} - \protect\np{ln\_trabbc})} 887 871 \label{subsec:TRA_bbc} 888 872 %--------------------------------------------nambbc-------------------------------------------------------- … … 924 908 % Bottom Boundary Layer 925 909 % ================================================================ 926 \section[Bottom boundary layer (\textit{trabbl.F90} - \forcode{ln_trabbl=.true.})] 927 {Bottom boundary layer (\protect\mdl{trabbl} - \protect\np{ln\_trabbl}\forcode{=.true.})} 910 \section[Bottom boundary layer (\textit{trabbl.F90} - \forcode{ln_trabbl})]{Bottom boundary layer (\protect\mdl{trabbl} - \protect\np{ln\_trabbl})} 928 911 \label{sec:TRA_bbl} 929 912 %--------------------------------------------nambbl--------------------------------------------------------- … … 961 944 % Diffusive BBL 962 945 % ------------------------------------------------------------------------------------------------------------- 963 \subsection[Diffusive bottom boundary layer (\forcode{nn_bbl_ldf=1})] 964 {Diffusive bottom boundary layer (\protect\np{nn\_bbl\_ldf}\forcode{=1})} 946 \subsection[Diffusive bottom boundary layer (\forcode{nn_bbl_ldf=1})]{Diffusive bottom boundary layer (\protect\np{nn\_bbl\_ldf}\forcode{=1})} 965 947 \label{subsec:TRA_bbl_diff} 966 948 … … 1001 983 % Advective BBL 1002 984 % ------------------------------------------------------------------------------------------------------------- 1003 \subsection[Advective bottom boundary layer (\forcode{nn_bbl_adv=[12]})] 1004 {Advective bottom boundary layer (\protect\np{nn\_bbl\_adv}\forcode{=[12]})} 985 \subsection[Advective bottom boundary layer (\forcode{nn_bbl_adv=[12]})]{Advective bottom boundary layer (\protect\np{nn\_bbl\_adv}\forcode{=[12]})} 1005 986 \label{subsec:TRA_bbl_adv} 1006 987 … … 1093 1074 % Tracer damping 1094 1075 % ================================================================ 1095 \section[Tracer damping (\textit{tradmp.F90})] 1096 {Tracer damping (\protect\mdl{tradmp})} 1076 \section[Tracer damping (\textit{tradmp.F90})]{Tracer damping (\protect\mdl{tradmp})} 1097 1077 \label{sec:TRA_dmp} 1098 1078 %--------------------------------------------namtra_dmp------------------------------------------------- … … 1153 1133 % Tracer time evolution 1154 1134 % ================================================================ 1155 \section[Tracer time evolution (\textit{tranxt.F90})] 1156 {Tracer time evolution (\protect\mdl{tranxt})} 1135 \section[Tracer time evolution (\textit{tranxt.F90})]{Tracer time evolution (\protect\mdl{tranxt})} 1157 1136 \label{sec:TRA_nxt} 1158 1137 %--------------------------------------------namdom----------------------------------------------------- … … 1189 1168 % Equation of State (eosbn2) 1190 1169 % ================================================================ 1191 \section[Equation of state (\textit{eosbn2.F90})] 1192 {Equation of state (\protect\mdl{eosbn2})} 1170 \section[Equation of state (\textit{eosbn2.F90})]{Equation of state (\protect\mdl{eosbn2})} 1193 1171 \label{sec:TRA_eosbn2} 1194 1172 %--------------------------------------------nameos----------------------------------------------------- … … 1204 1182 % Equation of State 1205 1183 % ------------------------------------------------------------------------------------------------------------- 1206 \subsection[Equation of seawater (\texttt{ln}\{\texttt{\_teso10,\_eos80,\_seos}\})] 1207 {Equation of seawater (\protect\np{ln\_teos10}, \protect\np{ln\_teos80}, or \protect\np{ln\_seos}) } 1184 \subsection[Equation of seawater (\texttt{ln}\{\texttt{\_teso10,\_eos80,\_seos}\})]{Equation of seawater (\protect\np{ln\_teos10}, \protect\np{ln\_teos80}, or \protect\np{ln\_seos})} 1208 1185 \label{subsec:TRA_eos} 1209 1186 … … 1330 1307 % Brunt-V\"{a}is\"{a}l\"{a} Frequency 1331 1308 % ------------------------------------------------------------------------------------------------------------- 1332 \subsection[Brunt-V\"{a}is\"{a}l\"{a} frequency] 1333 {Brunt-V\"{a}is\"{a}l\"{a} frequency} 1309 \subsection[Brunt-V\"{a}is\"{a}l\"{a} frequency]{Brunt-V\"{a}is\"{a}l\"{a} frequency} 1334 1310 \label{subsec:TRA_bn2} 1335 1311 … … 1385 1361 % Horizontal Derivative in zps-coordinate 1386 1362 % ================================================================ 1387 \section[Horizontal derivative in \textit{zps}-coordinate (\textit{zpshde.F90})] 1388 {Horizontal derivative in \textit{zps}-coordinate (\protect\mdl{zpshde})} 1363 \section[Horizontal derivative in \textit{zps}-coordinate (\textit{zpshde.F90})]{Horizontal derivative in \textit{zps}-coordinate (\protect\mdl{zpshde})} 1389 1364 \label{sec:TRA_zpshde} 1390 1365
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