Changeset 14789 for NEMO/branches/2021/dev_r13747_HPC-11_mcastril_HPDAonline_DiagGPU/doc/latex/NEMO/main/bibliography.bib

Timestamp:

2021-05-05T13:18:04+02:00 (3 years ago)

Author:

mcastril

Message:

[2021/HPC-11_mcastril_HPDAonline_DiagGPU] Update externals

Location:

NEMO/branches/2021/dev_r13747_HPC-11_mcastril_HPDAonline_DiagGPU

Files:

• . (modified) (1 prop)
• doc/latex/NEMO/main/bibliography.bib (modified) (35 diffs, 1 prop)

NEMO/branches/2021/dev_r13747_HPC-11_mcastril_HPDAonline_DiagGPU

@@ -3 +3 @@
 ^/utils/build/mk@HEAD         mk
 ^/utils/tools@HEAD            tools
-^/vendors/AGRIF/dev_r12970_AGRIF_CMEMS      ext/AGRIF
+^/vendors/AGRIF/dev@HEAD      ext/AGRIF
 ^/vendors/FCM@HEAD            ext/FCM
 ^/vendors/IOIPSL@HEAD         ext/IOIPSL
+^/vendors/PPR@HEAD            ext/PPR
 
 # SETTE
-^/utils/CI/sette@13559        sette
+^/utils/CI/sette@14244        sette

@@ -3 +3 @@
 ^/utils/build/mk@HEAD         mk
 ^/utils/tools@HEAD            tools
-^/vendors/AGRIF/dev_r12970_AGRIF_CMEMS      ext/AGRIF
+^/vendors/AGRIF/dev@HEAD      ext/AGRIF
 ^/vendors/FCM@HEAD            ext/FCM
 ^/vendors/IOIPSL@HEAD         ext/IOIPSL
+^/vendors/PPR@HEAD            ext/PPR
 
 # SETTE
-^/utils/CI/sette@13559        sette
+^/utils/CI/sette@14244        sette

NEMO/branches/2021/dev_r13747_HPC-11_mcastril_HPDAonline_DiagGPU/doc/latex/NEMO/main/bibliography.bib

@@ -119 +119 @@
   issn          = "0148-0227",
   doi           = "10.1029/2001jc000922"
+}
+
+@Article{         Asaydavis2016,
+  author        = {Asay-Davis, X. S. and Cornford, S. L. and Durand, G. and Galton-Fenzi, B. K. and Gladstone, R. M. and Gudmundsson, G. H. and Hattermann, T. and Holland, D. M. and Holland, D. and Holland, P. R. and Martin, D. F. and Mathiot, P. and Pattyn, F. and Seroussi, H.},
+  title         = {Experimental design for three interrelated marine ice sheet and ocean model intercomparison projects: MISMIP v. 3 (MISMIP$+$), ISOMIP v. 2 (ISOMIP$+$) and MISOMIP v. 1 (MISOMIP1)},
+  journal       = {Geoscientific Model Development},
+  volume        = {9},
+  year          = {2016},
+  number        = {7},
+  pages         = {2471--2497},
+  url           = {https://www.geosci-model-dev.net/9/2471/2016/},
+  doi           = {10.5194/gmd-9-2471-2016}
 }
 
@@ -188 +200 @@
 }
 
-@article{ beljaars_QJRMS95,
-title = "The parametrization of surface fluxes in large-scale models under free convection",
-pages = "255--270",
-journal = "Quarterly Journal of the Royal Meteorological Society",
-volume = "121",
-number = "522",
-author = "Beljaars, Anton C. M.",
-year = "1995",
-month = "jan",
- publisher     = "Wiley",
-issn = "00359009",
-doi = "10.1002/qj.49712152203"
+@article{         beljaars_QJRMS95,
+  title         = "The parametrization of surface fluxes in large-scale
+                  models under free convection",
+  pages         = "255--270",
+  journal       = "Quarterly Journal of the Royal Meteorological Society",
+  volume        = "121",
+  number        = "522",
+  author        = "Beljaars, Anton C. M.",
+  year          = "1995",
+  month         = "jan",
+  publisher     = "Wiley",
+  issn          = "00359009",
+  doi           = "10.1002/qj.49712152203"
 }
 
@@ -384 +397 @@
 }
 
+@article{         brodeau.barnier.ea_JPO16,
+  title         = "Climatologically Significant Effects of Some
+                  Approximations in the Bulk Parameterizations of Turbulent
+                  Air–Sea Fluxes",
+  pages         = "5--28",
+  journal       = "Journal of Physical Oceanography",
+  volume        = "47",
+  number        = "1",
+  author        = "Brodeau, Laurent and Barnier, Bernard and Gulev, Sergey K.
+                  and Woods, Cian",
+  year          = "2016",
+  month         = "jan",
+  publisher     = "American Meteorological Society",
+  issn          = "0022-3670",
+  doi           = "10.1175/jpo-d-16-0169.1"
+}
+
 @article{         brodeau.barnier.ea_OM10,
   title         = "An {ERA40}-based atmospheric forcing for global ocean
@@ -398 +428 @@
   issn          = "1463-5003",
   doi           = "10.1016/j.ocemod.2009.10.005"
-}
-
-@article{         brodeau.barnier.ea_JPO17,
-  title         = "Climatologically Significant Effects of Some Approximations in the Bulk Parameterizations of Turbulent Air{\textendash}Sea Fluxes",
-  pages         = "5--28",
-  journal       = "Journal of Physical Oceanography",
-  volume        = "47",
-  number        = "1",
-  author        = "Brodeau, Laurent and Barnier, Bernard and Gulev, Sergey K. and Woods, Cian",
-  year          = "2017",
-  month         = "jan",
-  publisher     = "American Meteorological Society",
-  issn          = "0022-3670",
-  doi           = "10.1175/jpo-d-16-0169.1",
 }
 
@@ -519 +535 @@
 }
 
-@article{         carrere.lyard_GRL03,
-  title         = "Modeling the barotropic response of the global ocean to
-                  atmospheric wind and pressure forcing - comparisons with
-                  observations",
-  journal       = "Geophysical Research Letters",
-  volume        = "30",
-  number        = "6",
-  author        = "L. Carr\`{e}re and F. Lyard",
-  year          = "2003",
-  month         = "mar",
-  publisher     = "American Geophysical Union (AGU)",
-  issn          = "0094-8276",
-  doi           = "10.1029/2002gl016473"
-}
-
-@techreport{      chanut_rpt05,
+@techreport{      chanut_trpt05,
   title         = "Nesting code for {NEMO}",
   pages         = "25",
@@ -773 +774 @@
 }
 
-@article{ edson.jampana.ea_JPO13,
-title = "On the Exchange of Momentum over the Open Ocean",
-pages = "1589--1610",
-journal = "Journal of Physical Oceanography",
-volume = "43",
-number = "8",
-author = "Edson, James B. and Jampana, Venkata and Weller, Robert A. and Bigorre, Sebastien P. and Plueddemann, Albert J. and Fairall, Christopher W. and Miller, Scott D. and Mahrt, Larry and Vickers, Dean and Hersbach, Hans",
-year = "2013",
-month = "aug",
-publisher = "American Meteorological Society",
-issn = "0022-3670",
-doi = "10.1175/JPO-D-12-0173.1"
-}
-
-@article{         egbert.ray_JGR01,
-  title         = "Estimates of {M2} tidal energy dissipation from
-                  {TOPEX}/Poseidon altimeter data",
-  pages         = "22475--22502",
-  journal       = "Journal of Geophysical Research",
-  volume        = "106",
-  number        = "C10",
-  author        = "G. D. Egbert and R. D. Ray",
-  year          = "2001",
-  month         = "oct",
-  publisher     = "American Geophysical Union (AGU)",
-  issn          = "0148-0227",
-  doi           = "10.1029/2000jc000699"
-}
-
-@article{         egbert.ray_N00,
-  title         = "Significant dissipation of tidal energy in the deep ocean
-                  inferred from satellite altimeter data",
-  pages         = "775--778",
-  journal       = "Nature",
-  volume        = "405",
-  number        = "6788",
-  author        = "G. D. Egbert and R. D. Ray",
-  year          = "2000",
-  month         = "jun",
-  publisher     = "Springer Nature",
-  issn          = "1476-4687",
-  doi           = "10.1038/35015531"
+@article{         edson.jampana.ea_JPO13,
+  title         = "On the Exchange of Momentum over the Open Ocean",
+  pages         = "1589--1610",
+  journal       = "Journal of Physical Oceanography",
+  volume        = "43",
+  number        = "8",
+  author        = "Edson, James B. and Jampana, Venkata and Weller, Robert A.
+                  and Bigorre, Sebastien P. and Plueddemann, Albert J. and
+                  Fairall, Christopher W. and Miller, Scott D. and Mahrt,
+                  Larry and Vickers, Dean and Hersbach, Hans",
+  year          = "2013",
+  month         = "aug",
+  publisher     = "American Meteorological Society",
+  issn          = "0022-3670",
+  doi           = "10.1175/JPO-D-12-0173.1"
 }
 
@@ -861 +835 @@
 }
 
-@article{ fairall.bradley.ea_JC03,
-title = "Bulk parameterization of air-sea fluxes: Updates and verification for the COARE algorithm",
-pages = "571--591",
-journal = "Journal of Climate",
-volume = "16",
-number = "4",
-author = "Fairall, C. W. and Bradley, E. F. and Hare, J. E. and Grachev, A. A. and Edson, J. B.",
-year = "2003",
-publisher = "American Meteorological Society",
-issn = "08948755",
-doi = "10.1175/1520-0442(2003)016<0571:BPOASF>2.0.CO;2"
+@article{         fairall.bradley.ea_JC03,
+  title         = "Bulk parameterization of air-sea fluxes: Updates and
+                  verification for the COARE algorithm",
+  pages         = "571--591",
+  journal       = "Journal of Climate",
+  volume        = "16",
+  number        = "4",
+  author        = "Fairall, C. W. and Bradley, E. F. and Hare, J. E. and
+                  Grachev, A. A. and Edson, J. B.",
+  year          = "2003",
+  publisher     = "American Meteorological Society",
+  issn          = "08948755",
+  doi           = "10.1175/1520-0442(2003)016<0571:BPOASF>2.0.CO;2"
+}
+
+@article{         fairall.bradley.ea_JGRO96,
+  title         = "Cool-skin and warm-layer effects on sea surface
+                  temperature",
+  pages         = "1295--1308",
+  journal       = "Journal of Geophysical Research: Oceans",
+  volume        = "101",
+  number        = "C1",
+  author        = "C. W. Fairall and E. F. Bradley and J. S. Godfrey and G.
+                  A. Wick and J. B. Edson and G. S. Young",
+  year          = "1996",
+  month         = "jan",
+  publisher     = "American Geophysical Union",
+  doi           = "10.1029/95jc03190"
 }
 
@@ -897 +888 @@
   issn          = "1520-0485",
   doi           = "10.1175/1520-0485(1995)025<1731:antasf>2.0.co;2"
+}
+
+@Article{         favier2019,
+  author        = {Favier, L. and Jourdain, N. C. and Jenkins, A. and Merino, N. and Durand, G. and Gagliardini, O. and Gillet-Chaulet, F. and Mathiot, P.},
+  title         = {Assessment of sub-shelf melting parameterisations using the ocean--ice-sheet coupled model NEMO(v3.6)--Elmer/Ice(v8.3)},
+  journal       = {Geoscientific Model Development},
+  volume        = {12},
+  year          = {2019},
+  number        = {6},
+  pages         = {2255--2283},
+  url           = {https://www.geosci-model-dev.net/12/2255/2019/},
+  doi           = {10.5194/gmd-12-2255-2019}
 }
 
@@ -928 +931 @@
 }
 
-@article{         foxkemper.ferrari_JPO08,
-  title         = "Parameterization of Mixed Layer Eddies. Part I: Theory and Diagnosis",
+@article{         fox-kemper.ferrari.ea_JPO08,
+  title         = "Parameterization of Mixed Layer Eddies. Part I: Theory and
+                  Diagnosis",
   pages         = "1145--1165",
   journal       = "Journal of Physical Oceanography",
@@ -1030 +1034 @@
 }
 
-@article{         gerdes_JGR93*a,
+@article{         gerdes_JGR93,
   title         = "A primitive equation ocean circulation model using a
                   general vertical coordinate transformation: 1. Description
@@ -1045 +1049 @@
 }
 
-@article{         gerdes_JGR93*b,
+@article{         gerdes_JGR93*a,
   title         = "A primitive equation ocean circulation model using a
                   general vertical coordinate transformation: 2. Application
@@ -1060 +1064 @@
 }
 
-@techreport{      gibson_rpt86,
+@techreport{      gibson_trpt86,
   title         = "Standards for software development and maintenance",
   pages         = "21",
@@ -1099 +1103 @@
   issn          = "0148-0227",
   doi           = "10.1029/2010jb007867"
-}
-
-@article{         goosse.deleersnijder.ea_JGR99,
-  title         = "Sensitivity of a global coupled ocean-sea ice model to the
-                  parameterization of vertical mixing",
-  pages         = "13681--13695",
-  journal       = "Journal of Geophysical Research",
-  volume        = "104",
-  number        = "C6",
-  author        = "H. Goosse and E. Deleersnijder and T. Fichefet and M. H.
-                  England",
-  year          = "1999",
-  month         = "jun",
-  publisher     = "American Geophysical Union (AGU)",
-  issn          = "0148-0227",
-  doi           = "10.1029/1999jc900099"
 }
 
@@ -1222 +1210 @@
 }
 
+@article{         grosfeld1997,
+author          = {Grosfeld, K. and Gerdes, R. and Determann, J.},
+title           = {Thermohaline circulation and interaction between ice shelf cavities and the adjacent open ocean},
+journal         = {Journal of Geophysical Research: Oceans},
+
+volume          = {102},
+number          = {C7},
+pages           = {15595-15610},
+doi             = {10.1029/97JC00891},
+url             = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1029/97JC00891},
+year            = {1997}
+}
+
 @article{         guilyardi.madec.ea_CD01,
   title         = "The role of lateral ocean physics in the upper ocean
@@ -1369 +1370 @@
 }
 
-@techreport{      hunter_rpt06,
+@techreport{      hunter_trpt06,
   title         = "Specification for Test Models of Ice Shelf Cavities",
   pages         = "17",
@@ -1410 +1411 @@
 }
 
-@techreport{      janssen.breivik.ea_rpt13,
+@techreport{      janssen.breivik.ea_trpt13,
   title         = "Air-sea interaction and surface waves",
   pages         = "36",
@@ -1450 +1451 @@
   issn          = "0148-0227",
   doi           = "10.1029/91jc01842"
+}
+
+@article{         jenkins2001,
+  author        = {Jenkins, Adrian and Hellmer, Hartmut H. and Holland, David M.},
+  title         = {The Role of Meltwater Advection in the Formulation of Conservative Boundary Conditions at an Ice–Ocean Interface},
+  journal       = {Journal of Physical Oceanography},
+  volume        = {31},
+  number        = {1},
+  pages         = {285-296},
+  year          = {2001},
+  doi           = {10.1175/1520-0485(2001)031<0285:TROMAI>2.0.CO;2},
+  url           = {https://doi.org/10.1175/1520-0485(2001)031<0285:TROMAI>2.0.CO;2}
+}
+
+@article{         jourdain2017,
+  author        = {Jourdain, Nicolas C. and Mathiot, Pierre and Merino, Nacho and Durand, Gaël and Le Sommer, Julien and Spence, Paul and Dutrieux, Pierre and Madec, Gurvan},
+  title         = {Ocean circulation and sea-ice thinning induced by melting ice shelves in the Amundsen Sea},
+  journal       = {Journal of Geophysical Research: Oceans},
+  volume        = {122},
+  number        = {3},
+  pages         = {2550-2573},
+  keywords      = {Amundsen Sea, ice shelf, efficiency, circumpolar deep water, ocean circulation, sea ice},
+  doi           = {10.1002/2016JC012509},
+  url           = {https://agupubs.onlinelibrary.wiley.com/doi/abs/10.1002/2016JC012509},
+  year          = {2017}
+}
+
+@article{         josey.gulev.ea_OCC13,
+  title         = "Exchanges Through the Ocean Surface",
+  pages         = "115--140",
+  journal       = "Ocean Circulation and Climate",
+  author        = "Josey, Simon A. and Gulev, Serge and Yu, Lisan",
+  year          = "2013",
+  publisher     = "Elsevier",
+  issn          = "0074-6142",
+  isbn          = "9780123918512",
+  doi           = "10.1016/b978-0-12-391851-2.00005-2"
 }
 
@@ -1541 +1579 @@
 }
 
-@article{         koch-larrouy.lengaigne.ea_CD10,
-  title         = "Tidal mixing in the Indonesian Seas and its effect on the
-                  tropical climate system",
-  pages         = "891--904",
-  journal       = "Climate Dynamics",
-  volume        = "34",
-  number        = "6",
-  author        = "A. Koch-Larrouy and M. Lengaigne and P. Terray and G.
-                  Madec and S. Masson",
-  year          = "2010",
-  month         = "aug",
-  publisher     = "Springer Nature",
-  issn          = "1432-0894",
-  doi           = "10.1007/s00382-009-0642-4"
-}
-
 @article{         koch-larrouy.madec.ea_GRL07,
   title         = "On the transformation of Pacific water into Indonesian
@@ -1573 +1595 @@
 }
 
-@article{         koch-larrouy.madec.ea_OD08*a,
-  title         = "Water mass transformation along the Indonesian ThroughFlow
-                  in an {OGCM}",
-  pages         = "289--309",
-  journal       = "Ocean Dynamics",
-  volume        = "58",
-  number        = "3-4",
-  author        = "A. Koch-Larrouy and G. Madec and B. Blanke and R. Molcard",
-  year          = "2008",
-  month         = "oct",
-  publisher     = "Springer Nature",
-  issn          = "1616-7228",
-  doi           = "10.1007/s10236-008-0155-4"
-}
-
-@article{         koch-larrouy.madec.ea_OD08*b,
-  title         = "Physical processes contributing to the water mass
-                  transformation of the Indonesian ThroughFlow",
-  pages         = "275--288",
-  journal       = "Ocean Dynamics",
-  volume        = "58",
-  number        = "3-4",
-  author        = "A. Koch-Larrouy and G. Madec and D. Iudicone and A.
-                  Atmadipoera and R. Molcard",
-  year          = "2008",
-  month         = "oct",
-  publisher     = "Springer Nature",
-  issn          = "1616-7228",
-  doi           = "10.1007/s10236-008-0154-5"
-}
-
 @article{         kolmogorov_IANS42,
   title         = "Equations of turbulent motion in an incompressible fluid",
@@ -1614 +1605 @@
 }
 
-@article{         kraus.turner_tellus67,
-  author = {Kraus, E.B. and Turner, J.},
-  journal = {Tellus},
-  pages = {98--106},
-  title = {A one dimensional model of the seasonal thermocline {II}. {T}he general theory and its consequences},
-  volume = {19},
-  year = {1967}
-}
-
-@article{        large.ea_RG97,
+@article{         kraus.businger_QJRMS96,
+  title         = "Atmosphere-ocean interaction.",
+  pages         = "324--325",
+  journal       = "Quarterly Journal of the Royal Meteorological Society",
+  volume        = "122",
+  number        = "529",
+  author        = "E. B. Kraus and J. A. Businger",
+  year          = "1996",
+  publisher     = "John Wiley & Sons, Ltd",
+  issn          = "1477-870X",
+  doi           = "10.1002/qj.49712252914"
+}
+
+@article{         kraus.turner_T67,
+  title         = "A one-dimensional model of the seasonal thermocline II.
+                  The general theory and its consequences",
+  pages         = "98--106",
+  journal       = "Tellus",
+  volume        = "19",
+  number        = "1",
+  author        = "Kraus, E. B. and Turner, J. S.",
+  year          = "1967",
+  month         = "Jan",
+  publisher     = "Informa UK Limited",
+  issn          = "2153-3490",
+  doi           = "10.3402/tellusa.v19i1.9753"
+}
+
+@article{         large.mcwilliams.ea_RG94,
+  title         = "Oceanic vertical mixing: {A} review and a model with a
+                  nonlocal boundary layer parameterization",
+  pages         = "363--403",
+  journal       = "Reviews of Geophysics",
+  number        = "4",
   author        = "Large, W. G. and McWilliams, J. C. and Doney, S. C.",
-  doi           = "10.1029/94RG01872",
-  journal       = "Reviews of Geophysics",
-  number        = {4},
-  pages         = {363--403},
-  publisher     = {AGU},
-  title         = "Oceanic vertical mixing: {A} review and a model with a nonlocal boundary layer parameterization",
-  year          = "1994"
-}
-
-@techreport{      large.yeager_rpt04,
+  year          = "1994",
+  publisher     = "AGU",
+  doi           = "10.1029/94RG01872"
+}
+
+@article{         large.yeager_CD09,
+  title         = "The Global Climatology of an Interannually Varying Air-Sea
+                  Flux Data Set",
+  pages         = "341--364",
+  journal       = "Climate Dynamics",
+  volume        = "33",
+  number        = "2-3",
+  author        = "Large, W. G. and Yeager, S. G.",
+  year          = "2009",
+  month         = "aug",
+  publisher     = "Springer Science and Business Media LLC",
+  doi           = "10.1007/s00382-008-0441-3"
+}
+
+@techreport{      large.yeager_trpt04,
   title         = "Diurnal to decadal global forcing for ocean and sea-ice
                   models: the data sets and flux climatologies",
@@ -1849 +1874 @@
 }
 
-@techreport{      levier.treguier.ea_rpt07,
+@techreport{      levier.treguier.ea_trpt07,
   title         = "Free surface and variable volume in the {NEMO} code",
   pages         = "47",
@@ -1930 +1955 @@
 }
 
-@article{     lupkes.gryanik.ea_JGR12,
-  author    = "L{\"{u}}pkes, Christof and Gryanik, Vladimir M. and Hartmann, J{\"{o}}rg and Andreas, Edgar L.",
-  doi       = "10.1029/2012JD017630",
-  issn      = "01480227",
-  journal   = "Journal of Geophysical Research Atmospheres",
-  number    = "13",
-  pages  = "1--18",
-  title  = "A parametrization, based on sea ice morphology, of the neutral atmospheric drag coefficients for weather prediction and climate models",
-  volume    = "117",
-  year      = "2012"
-}
-
-@article{     lupkes.gryanik_JGR15,
-  author    = "L{\"{u}}pkes, Christof and Gryanik, Vladimir M.",
-  doi       = "10.1002/2014JD022418",
-  issn      = "21562202",
-  journal   = "Journal of Geophysical Research",
-  number    = "2",
-  pages  = "552--581",
-  title  = "A stability-dependent parametrization of transfer coefficients formomentum and heat over polar sea ice to be used in climate models",
-  volume    = "120",
-  year      = "2015"
+@article{         love_PRSL09,
+  title         = "The yielding of the earth to disturbing forces",
+  pages         = "73--88",
+  journal       = "Proceedings of the Royal Society of London",
+  series        = "Series A",
+  volume        = "82",
+  number        = "551",
+  author        = "Love, Augustus Edward Hough ",
+  year          = "1909",
+  month         = "Feb",
+  publisher     = "The Royal Society",
+  issn          = "2053-9150",
+  doi           = "10.1098/rspa.1909.0008"
+}
+
+@article{         lupkes.gryanik.ea_JGRA12,
+  title         = "A parametrization, based on sea ice morphology, of the
+                  neutral atmospheric drag coefficients for weather
+                  prediction and climate models",
+  pages         = "1--18",
+  journal       = "Journal of Geophysical Research Atmospheres",
+  volume        = "117",
+  number        = "13",
+  author        = "L{\"{u}}pkes, Christof and Gryanik, Vladimir M. and
+                  Hartmann, J{\"{o}}rg and Andreas, Edgar L.",
+  year          = "2012",
+  issn          = "01480227",
+  doi           = "10.1029/2012JD017630"
+}
+
+@article{         lupkes.gryanik_JGR15,
+  title         = "A stability-dependent parametrization of transfer
+                  coefficients formomentum and heat over polar sea ice to be
+                  used in climate models",
+  pages         = "552--581",
+  journal       = "Journal of Geophysical Research",
+  volume        = "120",
+  number        = "2",
+  author        = "L{\"{u}}pkes, Christof and Gryanik, Vladimir M.",
+  year          = "2015",
+  issn          = "21562202",
+  doi           = "10.1002/2014JD022418"
 }
 
@@ -2204 +2249 @@
 }
 
-@article{mcwilliams.ea_JFM97,
-   author = {McWilliams, James C. and Sullivan, Peter P. and Moeng, Chin-Hoh},
-   doi = {10.1017/S0022112096004375},
-   journal = {Journal of Fluid Mechanics},
-   pages = {1--30},
-   title = {Langmuir turbulence in the ocean},
-   volume = {334},
-   year = {1997},
-}
+@article{         mcwilliams.sullivan.ea_JFM97,
+  title         = "Langmuir turbulence in the ocean",
+  pages         = "1--30",
+  journal       = "Journal of Fluid Mechanics",
+  volume        = "334",
+  author        = "McWilliams, James C. and Sullivan, Peter P. and Moeng,
+                  Chin-Hoh",
+  year          = "1997",
+  doi           = "10.1017/S0022112096004375"
+}
+
 @article{         mellor.blumberg_JPO04,
   title         = "Wave Breaking and Ocean Surface Layer Thermal Response",
@@ -2239 +2286 @@
   issn          = "8755-1209",
   doi           = "10.1029/rg020i004p00851"
+}
+
+@article{Merino_OM2016,
+title = "Antarctic icebergs melt over the Southern Ocean: Climatology and impact on sea ice",
+journal = "Ocean Modelling",
+volume = "104",
+pages = "99 - 110",
+year = "2016",
+issn = "1463-5003",
+doi = "https://doi.org/10.1016/j.ocemod.2016.05.001",
+url = "http://www.sciencedirect.com/science/article/pii/S1463500316300300",
+author = "Nacho Merino and Julien {Le Sommer} and Gael Durand and Nicolas C. Jourdain and Gurvan Madec and Pierre Mathiot and Jean Tournadre",
+keywords = "Icebergs, Southern Ocean, Sea ice, Freshwater fluxes",
+abstract = "Recent increase in Antarctic freshwater release to the Southern Ocean is suggested to contribute to change in water masses and sea ice. However, climate models differ in their representation of the freshwater sources. Recent improvements in altimetry-based detection of small icebergs and in estimates of the mass loss of Antarctica may help better constrain the values of Antarctic freshwater releases. We propose a model-based seasonal climatology of iceberg melt over the Southern Ocean using state-of-the-art observed glaciological estimates of the Antarctic mass loss. An improved version of a Lagrangian iceberg model is coupled with a global, eddy-permitting ocean/sea ice model and compared to small icebergs observations. Iceberg melt increases sea ice cover, about 10% in annual mean sea ice volume, and decreases sea surface temperature over most of the Southern Ocean, but with distinctive regional patterns. Our results underline the importance of improving the representation of Antarctic freshwater sources. This can be achieved by forcing ocean/sea ice models with a climatological iceberg fresh-water flux."
 }
 
@@ -2429 +2490 @@
 
 @article{         qiao.yuan.ea_OD10,
-  title         = "A three-dimensional surface wave–ocean circulation coupled 
-                  model and its initial testing",
+  title         = "A three-dimensional surface wave–ocean circulation
+                  coupled model and its initial testing",
   pages         = "1339--1335",
   journal       = "Ocean Dynamics",
   volume        = "60",
   number        = "5",
-  author        = "F. Qiao and Y. Yuan and T. Ezer and C. Xia and 
-                   Y. Yang and X. Lu and Z. Song ",
+  author        = "F. Qiao and Y. Yuan and T. Ezer and C. Xia and Y. Yang and
+                  X. Lu and Z. Song ",
   year          = "2010",
   month         = "oct",
@@ -2458 +2519 @@
 }
 
-@article{         reffray.guillaume.ea_GMD15,
-  title         = "Modelling turbulent vertical mixing sensitivity using
-                   a 1-D version of NEMO",
+@article{         reffray.bourdalle-badie.ea_GMD15,
+  title         = "Modelling turbulent vertical mixing sensitivity using a
+                  1-D version of NEMO",
   pages         = "69--86",
   journal       = "Geoscientific Model Development",
@@ -2638 +2699 @@
 
 @article{         shchepetkin_OM15,
-  title         = "An Adaptive, Courant-number-dependent implicit
-       scheme for vertical advection in oceanic modeling",
+  title         = "An Adaptive, Courant-number-dependent implicit scheme for
+                  vertical advection in oceanic modeling",
   pages         = "38--69",
   journal       = "Ocean Modelling",
@@ -2666 +2727 @@
 }
 
-@article{         simmons.jayne.ea_OM04,
-  title         = "Tidally driven mixing in a numerical model of the ocean
-                  general circulation",
-  pages         = "245--263",
-  journal       = "Ocean Modelling",
-  volume        = "6",
-  number        = "3-4",
-  author        = "H. L. Simmons and S. R. Jayne and L. C. {St Laurent} and
-                  A. J. Weaver",
-  year          = "2004",
-  month         = "jan",
-  publisher     = "Elsevier BV",
-  issn          = "1463-5003",
-  doi           = "10.1016/s1463-5003(03)00011-8"
-}
-
-@article{         smagorinsky_MW63,
-  title         = "General circulation experiments with the primitive equations: I. The basic experiment ",
+@article{         smagorinsky_MWR63,
+  title         = "General circulation experiments with the primitive
+                  equations: I. The basic experiment ",
   pages         = "99--164",
   journal       = "Monthly Weather Review",
@@ -2724 +2770 @@
   issn          = "1520-0493",
   doi           = "10.1175/1520-0493(1998)126<3213:agpgff>2.0.co;2"
-}
-
-@article{         st-laurent.nash_DSR04,
-  title         = "An examination of the radiative and dissipative properties
-                  of deep ocean internal tides",
-  pages         = "3029--3042",
-  journal       = "Deep Sea Research",
-  volume        = "51",
-  number        = "25-26",
-  author        = "L. C. {St Laurent} and J. D. Nash",
-  year          = "2004",
-  month         = "dec",
-  publisher     = "Elsevier BV",
-  issn          = "0967-0645",
-  doi           = "10.1016/j.dsr2.2004.09.008"
 }
 
@@ -2812 +2843 @@
   isbn          = "9780511702242",
   doi           = "10.1017/cbo9780511702242.013"
+}
+
+@book{            sverdrup.johnson.ea_bk42,
+  title         = "The Oceans, Their Physics, Chemistry, and General Biology",
+  pages         = "1087",
+  author        = "H. U. Sverdrup and Martin W. Johnson and Richard H.
+                  Fleming",
+  year          = "1942",
+  publisher     = "Prentice-Hall",
+  address       = "New York"
 }
 
@@ -2942 +2983 @@
 }
 
-@article{         vancoppenolle.fichefet.ea_OM09*a,
-  title         = "Simulating the mass balance and salinity of Arctic and
-                  Antarctic sea ice. 1. Model description and validation",
-  pages         = "33--53",
-  journal       = "Ocean Modelling",
-  volume        = "27",
-  number        = "1-2",
-  author        = "M. Vancoppenolle and T. Fichefet and H. Goosse and S.
-                  Bouillon and G. Madec and M. A. Morales Maqueda",
-  year          = "2009",
-  month         = "jan",
-  publisher     = "Elsevier BV",
-  issn          = "1463-5003",
-  doi           = "10.1016/j.ocemod.2008.10.005"
-}
-
-@article{         vancoppenolle.fichefet.ea_OM09*b,
-  title         = "Simulating the mass balance and salinity of Arctic and
-                  Antarctic sea ice. 2. Importance of sea ice salinity
-                  variations",
-  pages         = "54--69",
-  journal       = "Ocean Modelling",
-  volume        = "27",
-  number        = "1-2",
-  author        = "M. Vancoppenolle and T. Fichefet and H. Goosse",
-  year          = "2009",
-  month         = "jan",
-  publisher     = "Elsevier BV",
-  issn          = "1463-5003",
-  doi           = "10.1016/j.ocemod.2008.11.003"
-}
-
 @article{         warner.defne.ea_CG13,
   title         = "A wetting and drying scheme for {ROMS}",
@@ -3048 +3057 @@
 }
 
-@article{         white.hoskins.ea_QJRMS05,
-  title         = "Consistent approximate models of the global atmosphere: shallow, deep,
-                  hydrostatic, quasi-hydrostatic and non-hydrostatic",
-  pages         = "2081--2107",
-  journal       = "Quarterly Journal of the Royal Meteorological Society",
-  volume        = "131",
-  author        = "A. A. White and B. J. Hoskins and I. Roulstone and A. Staniforth",
-  year          = "2005",
-  doi           = "10.1256/qj.04.49"
-}
-
 @article{         white.adcroft.ea_JCP09,
   title         = "High-order regridding-remapping schemes for continuous
@@ -3072 +3070 @@
   issn          = "0021-9991",
   doi           = "10.1016/j.jcp.2009.08.016"
+}
+
+@article{         white.hoskins.ea_QJRMS05,
+  title         = "Consistent approximate models of the global atmosphere:
+                  shallow, deep, hydrostatic, quasi-hydrostatic and
+                  non-hydrostatic",
+  pages         = "2081--2107",
+  journal       = "Quarterly Journal of the Royal Meteorological Society",
+  volume        = "131",
+  author        = "A. A. White and B. J. Hoskins and I. Roulstone and A.
+                  Staniforth",
+  year          = "2005",
+  doi           = "10.1256/qj.04.49"
 }
 
@@ -3121 +3132 @@
 }
 
+@article{         zeng.beljaars_GRL05,
+  title         = "A prognostic scheme of sea surface skin temperature for
+                  modeling and data assimilation",
+  journal       = "Geophysical Research Letters",
+  volume        = "32",
+  number        = "14",
+  author        = "Xubin Zeng and Anton Beljaars",
+  year          = "2005",
+  month         = "jul",
+  publisher     = "American Geophysical Union",
+  doi           = "10.1029/2005gl023030"
+}
+
 @article{         zhang.endoh_JGR92,
   title         = "A free surface General Circulation Model for the tropical
@@ -3134 +3158 @@
   doi           = "10.1029/92jc00911"
 }
-
-@article{large.yeager_CD09,
-author="Large, W. G. and Yeager, S. G.",
-title="The Global Climatology of an Interannually Varying Air-Sea Flux Data Set",
-pages = "341--364",
-journal="Climate Dynamics",
-volume = "33",
-number = "2-3",
-year="2009",
-month = "aug",
-publisher = "Springer Science and Business Media LLC",
-doi="10.1007/s00382-008-0441-3"
-}
-
-@book{sverdrup.johnson.ea_1942,
-author = {H. U. Sverdrup and Martin W. Johnson and Richard H. Fleming},
-title = {The Oceans, Their Physics, Chemistry, and General Biology},
-publisher = {Prentice-Hall},
-address = {New York},
-year = {1942},
-pages = {1087},
-}
-
-@article{kraus.businger_QJRMS96,
-author = "E. B. Kraus and J. A. Businger",
-title = "Atmosphere-ocean interaction.",
-journal="Quarterly Journal of the Royal Meteorological Society",,
-year = "1996",
-volume = "122",
-number = "529",
-pages = "324-325",
-publisher = "John Wiley & Sons, Ltd",
-issn = "1477-870X",
-doi = "10.1002/qj.49712252914"
-}
-
-@article{josey.gulev.ea_2013,
-title = "Exchanges through the ocean surface",
-journal = "Ocean Circulation and Climate - A 21st Century Perspective, Int. Geophys. Ser.",
-year = "2013",
-author = "S. A. Josey and S. Gulev and L. Yu",
-pages = "115-140, edited by G. Siedler et al., Academic Press, Oxford",
-volume = "103",
-doi = "10.1016/B978-0-12-391851-2.00005-2"
-}
-
-@article{fairall.bradley.ea_JGR96,
-  year = "1996",
- journal = "Journal of Geophysical Research: Oceans",
-  month = "jan",
-  publisher = "American Geophysical Union",
-  volume = "101",
-  number = "C1",
-  pages = "1295-1308",
-  author = "C. W. Fairall and E. F. Bradley and J. S. Godfrey and G. A. Wick and J. B. Edson and G. S. Young",
-  title = "Cool-skin and warm-layer effects on sea surface temperature",
-  doi = "10.1029/95jc03190"
-}
-
-@article{zeng.beljaars_GRL05,
-  year = "2005",
-  month = "jul",
-  publisher = "American Geophysical Union",
-  volume = "32",
-  number = "14",
-  author = "Xubin Zeng and Anton Beljaars",
-  title = "A prognostic scheme of sea surface skin temperature for modeling and data assimilation",
-  journal = "Geophysical Research Letters",
-  doi = "10.1029/2005gl023030"
-}
-

@@ -3 +3 @@
 ^/utils/build/mk@HEAD         mk
 ^/utils/tools@HEAD            tools
-^/vendors/AGRIF/dev_r12970_AGRIF_CMEMS      ext/AGRIF
+^/vendors/AGRIF/dev@HEAD      ext/AGRIF
 ^/vendors/FCM@HEAD            ext/FCM
 ^/vendors/IOIPSL@HEAD         ext/IOIPSL
+^/vendors/PPR@HEAD            ext/PPR
 
 # SETTE
-^/utils/CI/sette@13559        sette
+^/utils/CI/sette@14244        sette