Changeset 3465 for branches/2012/dev_r3438_LOCEAN15_PISLOB/NEMOGCM
- Timestamp:
- 2012-09-04T12:14:47+02:00 (12 years ago)
- Location:
- branches/2012/dev_r3438_LOCEAN15_PISLOB/NEMOGCM/SETTE
- Files:
-
- 3 edited
Legend:
- Unmodified
- Added
- Removed
-
branches/2012/dev_r3438_LOCEAN15_PISLOB/NEMOGCM/SETTE/iodef_sette.xml
r3294 r3465 209 209 210 210 <group id="ptrc_T" axis_ref="deptht" grid_ref="grid_T"> 211 <field id="DIC" description="Dissolved inorganic Concentration" unit="molC/L" /> 212 <field id="Alkalini" description="Total Alkalinity Concentration" unit="eq/L" /> 213 <field id="O2" description="Oxygen Concentration" unit="molO2/L" /> 214 <field id="CaCO3" description="Calcite Concentration" unit="molC/L" /> 215 <field id="PO4" description="Phosphate Concentration" unit="molC/L" /> 216 <field id="POC" description="Small organic carbon Concentration" unit="molC/L" /> 217 <field id="Si" description="Silicate Concentration" unit="molSi/L" /> 218 <field id="PHY" description="Nanophytoplankton Concentration" unit="molC/L" /> 219 <field id="ZOO" description="Microzooplankton Concentration" unit="molC/L" /> 220 <field id="DOC" description="Dissolved organic Concentration" unit="molC/L" /> 221 <field id="PHY2" description="Diatoms Concentration" unit="molC/L" /> 222 <field id="ZOO2" description="Mesozooplankton Concentration" unit="molC/L" /> 223 <field id="BSi" description="Diatoms Silicate Concentration" unit="molC/L" /> 224 <field id="Fer" description="Dissolved Iron Concentration" unit="molFe/L" /> 225 <field id="BFe" description="Big iron particles Concentration" unit="molFe/L" /> 226 <field id="GOC" description="Big organic carbon Concentration" unit="molC/L" /> 227 <field id="SFe" description="Small iron particles Concentration" unit="molFe/L" /> 228 <field id="DFe" description="Diatoms iron Concentration" unit="molFe/L" /> 229 <field id="DSi" description="Sinking biogenic Silicate Concentration" unit="molC/L" /> 230 <field id="NFe" description="Nano iron Concentration" unit="molC/L" /> 231 <field id="NCHL" description="Nano chlorophyl Concentration" unit="gChl/L" /> 232 <field id="DCHL" description="Diatoms chlorophyl Concentration" unit="gChl/L" /> 233 <field id="NO3" description="Nitrates Concentration" unit="molC/L" /> 234 <field id="NH4" description="Ammonium Concentration" unit="molC/L" /> 235 <field id="DET" description="Detritus" unit="mmole-N/m3" /> 236 <field id="ZOO" description="Zooplankton Concentration" unit="mmole-N/m3" /> 237 <field id="PHY" description="Phytoplankton Concentration" unit="mmole-N/m3" /> 238 <field id="NO3" description="Nitrate Concentration" unit="mmole-N/m3" /> 239 <field id="NH4" description="Ammonium Concentration" unit="mmole-N/m3" /> 240 <field id="DOM" description="Dissolved Organic Matter" unit="mmole-N/m3" /> 241 211 <field id="DIC" description="Dissolved inorganic Concentration" unit="mmol/m3" /> 212 <field id="Alkalini" description="Total Alkalinity Concentration" unit="mmol/m3" /> 213 <field id="O2" description="Oxygen Concentration" unit="mmol/m3" /> 214 <field id="CaCO3" description="Calcite Concentration" unit="mmol/m3" /> 215 <field id="PO4" description="Phosphate Concentration" unit="mmol/m3" /> 216 <field id="POC" description="Small organic carbon Concentration" unit="mmol/m3" /> 217 <field id="Si" description="Silicate Concentration" unit="mmol/m3" /> 218 <field id="PHY" description="Nanophytoplankton Concentration" unit="mmol/m3" /> 219 <field id="ZOO" description="Microzooplankton Concentration" unit="mmol/m3" /> 220 <field id="DOC" description="Dissolved organic Concentration" unit="mmol/m3" /> 221 <field id="PHY2" description="Diatoms Concentration" unit="mmol/m3" /> 222 <field id="ZOO2" description="Mesozooplankton Concentration" unit="mmol/m3" /> 223 <field id="DSi" description="Diatoms Silicate Concentration" unit="mmol/m3" /> 224 <field id="Fer" description="Dissolved Iron Concentration" unit="mmol/m3" /> 225 <field id="BFe" description="Big iron particles Concentration" unit="mmol/m3" /> 226 <field id="GOC" description="Big organic carbon Concentration" unit="mmol/m3" /> 227 <field id="SFe" description="Small iron particles Concentration" unit="mmol/m3" /> 228 <field id="DFe" description="Diatoms iron Concentration" unit="mmol/m3" /> 229 <field id="GSi" description="Sinking biogenic Silicate Concentration" unit="mmol/m3" /> 230 <field id="NFe" description="Nano iron Concentration" unit="mmol/m3" /> 231 <field id="NCHL" description="Nano chlorophyl Concentration" unit="mg/m3" /> 232 <field id="DCHL" description="Diatoms chlorophyl Concentration" unit="mg/m3" /> 233 <field id="NO3" description="Nitrates Concentration" unit="mmol/m3" /> 234 <field id="NH4" description="Ammonium Concentration" unit="mmol/m3" /> 242 235 </group> 243 236 … … 245 238 246 239 <group id="diad_T" axis_ref="none" grid_ref="grid_T"> 247 <field id="PH" description="PH" unit="-" 248 <field id="CO3" description="Bicarbonates" unit="mol/ L"axis_ref="deptht" />249 <field id="CO3sat" description="CO3 saturation" unit="mol/ L"axis_ref="deptht" />250 <field id="PAR" description="Photosynthetically Available Radiation" unit="W/m2" 240 <field id="PH" description="PH" unit="-" axis_ref="deptht" /> 241 <field id="CO3" description="Bicarbonates" unit="mol/m3" axis_ref="deptht" /> 242 <field id="CO3sat" description="CO3 saturation" unit="mol/m3" axis_ref="deptht" /> 243 <field id="PAR" description="Photosynthetically Available Radiation" unit="W/m2" axis_ref="deptht" /> 251 244 <field id="PPPHY" description="Primary production of nanophyto" unit="molC/m3/s" axis_ref="deptht" /> 252 245 <field id="PPPHY2" description="Primary production of diatoms" unit="molC/m3/s" axis_ref="deptht" /> 253 246 <field id="PPNEWN" description="New Primary production of nanophyto" unit="molC/m3/s" axis_ref="deptht" /> 254 247 <field id="PPNEWD" description="New Primary production of diatoms" unit="molC/m3/s" axis_ref="deptht" /> 255 <field id="PBSi" description="Primary production of Si diatoms" unit="molSi/m3/s" axis_ref="deptht" /> 256 <field id="PFeN" description="Primary production of nano iron" unit="molFe/m3/s" axis_ref="deptht" /> 257 <field id="PFeD" description="Primary production of diatoms iron" unit="molFe/m3/s" axis_ref="deptht" /> 248 <field id="PBSi" description="Primary production of Si diatoms" unit="molSi/m3/s" axis_ref="deptht" /> 249 <field id="PFeN" description="Primary production of nano iron" unit="molFe/m3/s" axis_ref="deptht" /> 250 <field id="PFeD" description="Primary production of diatoms iron" unit="molFe/m3/s" axis_ref="deptht" /> 251 <field id="xfracal" description="Calcifying fraction" unit="-" axis_ref="deptht" /> 258 252 <field id="PCAL" description="Calcite production" unit="molC/m3/s" axis_ref="deptht" /> 259 253 <field id="DCAL" description="Calcite dissolution" unit="molC/m3/s" axis_ref="deptht" /> 260 <field id="GRAZ" description="Grazing by zooplankton" unit="molC/m3/s" axis_ref="deptht" /> 261 <field id="Nfix" description="Nitrogen fixation at surface" unit="molN/m2/s" /> 262 <field id="EPC100" description="Export of carbon particles at 100 m" unit="molC/m2/s" /> 263 <field id="EPFE100" description="Export of biogenic iron at 100 m" unit="molFe/m2/s" /> 264 <field id="EPSI100" description="Export of Silicate at 100 m" unit="molSi/m2/s" /> 265 <field id="EPCAL100" description="Export of Calcite at 100 m" unit="molC/m2/s" /> 266 <field id="Cflx" description="DIC flux" unit="molC/m2/s" /> 267 <field id="Oflx" description="Oxygen flux" unit="molC/m2/s" /> 268 <field id="Kg" description="Gas transfer" unit="molC/m2/s/uatm" /> 269 <field id="Dpco2" description="Delta CO2" unit="uatm" /> 270 <field id="Dpo2" description="Delta O2" unit="uatm" /> 271 <field id="Heup" description="Euphotic layer depth" unit="m" /> 272 <field id="Irondep" description="Iron deposition" unit="molFe/m2/s" /> 273 <field id="FNO3PHY" description="FNO3PHY" unit="-" axis_ref="deptht" /> 274 <field id="FNH4PHY" description="FNH4PHY" unit="-" axis_ref="deptht" /> 275 <field id="FNH4NO3" description="FNH4NO3" unit="-" axis_ref="deptht" /> 276 <field id="TNO3PHY" description="TNO3PHY" unit="-" /> 277 <field id="TNH4PHY" description="TNH4PHY" unit="-" /> 278 <field id="TPHYDOM" description="TPHYDOM" unit="-" /> 279 <field id="TPHYNH4" description="TPHYNH4" unit="-" /> 280 <field id="TPHYZOO" description="TPHYZOO" unit="-" /> 281 <field id="TPHYDET" description="TPHYDET" unit="-" /> 282 <field id="TDETZOO" description="TDETZOO" unit="-" /> 283 <field id="TDETSED" description="TDETSED" unit="-" /> 284 <field id="TZOODET" description="TZOODET" unit="-" /> 285 <field id="TZOOBOD" description="TZOOBOD" unit="-" /> 286 <field id="TZOONH4" description="TZOONH4" unit="-" /> 287 <field id="TZOODOM" description="TZOODOM" unit="-" /> 288 <field id="TNH4NO3" description="TNH4NO3" unit="-" /> 289 <field id="TDOMNH4" description="TDOMNH4" unit="-" /> 290 <field id="TDETNH4" description="TDETNH4" unit="-" /> 291 <field id="TPHYTOT" description="TPHYTOT" unit="-" /> 292 <field id="TZOOTOT" description="TZOOTOT" unit="-" /> 293 <field id="TDETDOM" description="TDETDOM" unit="-" /> 294 <field id="SEDPOC" description="SEDPOC" unit="-" /> 254 <field id="GRAZ1" description="Grazing by microzooplankton" unit="molC/m3/s" axis_ref="deptht" /> 255 <field id="GRAZ2" description="Grazing by mesozooplankton" unit="molC/m3/s" axis_ref="deptht" /> 256 <field id="REMIN" description="Oxic remineralization of OM" unit="molC/m3/s" axis_ref="deptht" /> 257 <field id="DENIT" description="Anoxic remineralization of OM" unit="molC/m3/s" axis_ref="deptht" /> 258 <field id="Nfix" description="Nitrogen fixation" unit="molN/m3/s" axis_ref="deptht" /> 259 <field id="Mumax" description="Maximum growth rate" unit="s-1" axis_ref="deptht" /> 260 <field id="MuN" description="Realized growth rate for nanophyto" unit="s-1" axis_ref="deptht" /> 261 <field id="MuD" description="Realized growth rate for diatomes" unit="s-1" axis_ref="deptht" /> 262 <field id="LNnut" description="Nutrient limitation term in Nanophyto" unit="-" axis_ref="deptht" /> 263 <field id="LDnut" description="Nutrient limitation term in Diatoms" unit="-" axis_ref="deptht" /> 264 <field id="LNFe" description="Iron limitation term in Nanophyto" unit="-" axis_ref="deptht" /> 265 <field id="LDFe" description="Iron limitation term in Diatoms" unit="-" axis_ref="deptht" /> 266 <field id="LNlight" description="Light limitation term in Nanophyto" unit="-" axis_ref="deptht" /> 267 <field id="LDlight" description="Light limitation term in Diatoms" unit="-" axis_ref="deptht" /> 268 <field id="Fe2" description="Iron II concentration" unit="nmol/L" axis_ref="deptht" /> 269 <field id="Fe3" description="Iron III concentration" unit="nmol/L" axis_ref="deptht" /> 270 <field id="FeL1" description="Complexed Iron concentration with L1" unit="nmol/L" axis_ref="deptht" /> 271 <field id="FeL2" description="Complexed Iron concentration with L2" unit="nmol/L" axis_ref="deptht" /> 272 <field id="FeP" description="Precipitated Iron III" unit="nmol/L" axis_ref="deptht" /> 273 <field id="TL1" description="Total L1 concentration" unit="nmol/L" axis_ref="deptht" /> 274 <field id="TL2" description="Total L2 concentration" unit="nmol/L" axis_ref="deptht" /> 275 <field id="pdust" description="dust concentration" unit="g/L" /> 276 <field id="Totlig" description="Total ligand concentation" unit="nmol/L" axis_ref="deptht" /> 277 <field id="Biron" description="Bioavailable iron" unit="nmol/L" axis_ref="deptht" /> 278 <field id="Sdenit" description="Nitrate reduction in the sediments" unit="molN/m2/s" /> 279 <field id="Ironice" description="Iron input/uptake due to sea ice" unit="molFe/m2/s" /> 280 <field id="HYDR" description="Iron input from hydrothemal vents" unit="molFe/m2/s" /> 281 <field id="EPC100" description="Export of carbon particles at 100 m" unit="mol/m2/s" /> 282 <field id="EPFE100" description="Export of biogenic iron at 100 m" unit="mol/m2/s" /> 283 <field id="EPSI100" description="Export of Silicate at 100 m" unit="mol/m2/s" /> 284 <field id="EPCAL100" description="Export of Calcite at 100 m" unit="mol/m2/s" /> 285 <field id="Cflx" description="DIC flux" unit="mol/m2/s" /> 286 <field id="Oflx" description="Oxygen flux" unit="mol/m2/s" /> 287 <field id="Kg" description="Gas transfer" unit="mol/m2/s/uatm" /> 288 <field id="Dpco2" description="Delta CO2" unit="uatm" /> 289 <field id="Dpo2" description="Delta O2" unit="uatm" /> 290 <field id="Heup" description="Euphotic layer depth" unit="m" /> 291 <field id="Irondep" description="Iron deposition from dust" unit="mol/m2/s" /> 292 <field id="Ironsed" description="Iron deposition from sediment" unit="mol/m2/s" axis_ref="deptht" /> 295 293 </group> 296 294 -
branches/2012/dev_r3438_LOCEAN15_PISLOB/NEMOGCM/SETTE/sette.sh
r3336 r3465 155 155 do 156 156 157 # TESTS FOR GYRE _LOBSTERCONFIGURATION157 # TESTS FOR GYRE CONFIGURATION 158 158 if [ ${config} -eq 1 ] ; then 159 ## Restartability tests for GYRE _LOBSTER159 ## Restartability tests for GYRE 160 160 export TEST_NAME="LONG" 161 161 cd ${SETTE_DIR} 162 . ../CONFIG/makenemo -m ${CMP_NAM} -n GYRE LOB_LONG -r GYRE_LOBSTER-j 8162 . ../CONFIG/makenemo -m ${CMP_NAM} -n GYRE_LONG -r GYRE -j 8 163 163 cd ${SETTE_DIR} 164 164 . param.cfg … … 169 169 \rm $JOB_FILE 170 170 cd ${EXE_DIR} 171 set_namelist namelist cn_exp \"GYRE LOB_LONG\"171 set_namelist namelist cn_exp \"GYRE_LONG\" 172 172 set_namelist namelist nn_it000 1 173 173 set_namelist namelist nn_itend 120 … … 175 175 set_namelist namelist ln_clobber .true. 176 176 set_namelist namelist nn_solv 2 177 set_namelist namelist_top ln_diatrc .false.178 177 cd ${SETTE_DIR} 179 178 cp BATCH_TEMPLATE/batch-${COMPILER} job_batch_template || exit … … 186 185 . prepare_exe_dir.sh 187 186 cd ${EXE_DIR} 188 set_namelist namelist cn_exp \"GYRE LOB_SHORT\"187 set_namelist namelist cn_exp \"GYRE_SHORT\" 189 188 set_namelist namelist nn_it000 61 190 189 set_namelist namelist nn_itend 120 … … 194 193 set_namelist namelist ln_clobber .true. 195 194 set_namelist namelist nn_solv 2 196 ln -s -f ..\/LONG\/GYRELOB_LONG_00000060_restart.nc 197 ln -s -f ..\/LONG\/GYRELOB_LONG_00000060_restart_trc.nc 198 set_namelist namelist cn_ocerst_in \"GYRELOB_LONG_00000060_restart\" 199 set_namelist namelist_top ln_diatrc .false. 200 set_namelist namelist_top ln_rsttr .true. 201 set_namelist namelist_top nn_rsttr 2 202 set_namelist namelist_top cn_trcrst_in \"GYRELOB_LONG_00000060_restart_trc\" 195 ln -s -f ..\/LONG\/GYRE_LONG_00000060_restart.nc 196 ln -s -f ..\/LONG\/GYRE_LONG_00000060_restart_trc.nc 197 set_namelist namelist cn_ocerst_in \"GYRE_LONG_00000060_restart\" 203 198 cd ${SETTE_DIR} 204 199 cp BATCH_TEMPLATE/batch-${COMPILER} job_batch_template || exit … … 209 204 210 205 if [ ${config} -eq 2 ] ; then 211 ## Reproducibility tests for GYRE _LOBSTER206 ## Reproducibility tests for GYRE 212 207 export TEST_NAME="REPRO_1_4" 213 208 cd ${SETTE_DIR} 214 . ../CONFIG/makenemo -m ${CMP_NAM} -n GYRE LOB_4 -r GYRE_LOBSTER -j 8 add_key "key_mpp_rep key_mpp_mpi"209 . ../CONFIG/makenemo -m ${CMP_NAM} -n GYRE_4 -r GYRE -j 8 add_key "key_mpp_mpi key_mpp_rep" 215 210 cd ${SETTE_DIR} 216 211 . param.cfg … … 221 216 \rm $JOB_FILE 222 217 cd ${EXE_DIR} 223 set_namelist namelist cn_exp \"GYRE LOB_14\"218 set_namelist namelist cn_exp \"GYRE_14\" 224 219 set_namelist namelist nn_it000 1 225 220 set_namelist namelist nn_itend 60 … … 229 224 set_namelist namelist ln_clobber .true. 230 225 set_namelist namelist nn_solv 2 231 set_namelist namelist_top ln_diatrc .false.232 set_namelist namelist_top ln_trcdta .false.233 226 set_namelist namelist jpni 1 234 227 set_namelist namelist jpnj 4 … … 247 240 \rm $JOB_FILE 248 241 cd ${EXE_DIR} 249 set_namelist namelist cn_exp \"GYRE LOB_22\"242 set_namelist namelist cn_exp \"GYRE_22\" 250 243 set_namelist namelist nn_it000 1 251 244 set_namelist namelist nn_itend 60 … … 254 247 set_namelist namelist ln_clobber .true. 255 248 set_namelist namelist nn_solv 2 256 set_namelist namelist_top ln_diatrc .false.257 set_namelist namelist_top ln_trcdta .false.258 249 set_namelist namelist jpni 2 259 250 set_namelist namelist jpnj 2 … … 290 281 # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false 291 282 # if not you need input files, and for tests is not necessary 292 set_namelist namelist_pisces ln_ironsed .false. 293 set_namelist namelist_pisces ln_river .false. 294 set_namelist namelist_pisces ln_ndepo .false. 295 set_namelist namelist_pisces ln_dust .false. 296 set_namelist namelist_pisces ln_presatm .false. 283 set_namelist namelist_pisces ln_presatm .false. 284 set_namelist namelist_pisces ln_varpar .false. 285 set_namelist namelist_pisces ln_dust .false. 286 set_namelist namelist_pisces ln_solub .false. 287 set_namelist namelist_pisces ln_river .false. 288 set_namelist namelist_pisces ln_ndepo .false. 289 set_namelist namelist_pisces ln_ironsed .false. 290 set_namelist namelist_pisces ln_hydrofe .false. 297 291 cd ${SETTE_DIR} 298 292 cp BATCH_TEMPLATE/batch-${COMPILER} job_batch_template || exit … … 324 318 # put ln_ironsed, ln_river, ln_ndepo, ln_dust 325 319 # if not you need input files, and for tests is not necessary 326 set_namelist namelist_pisces ln_ironsed .false. 327 set_namelist namelist_pisces ln_river .false. 328 set_namelist namelist_pisces ln_ndepo .false. 329 set_namelist namelist_pisces ln_dust .false. 330 set_namelist namelist_pisces ln_presatm .false. 320 set_namelist namelist_pisces ln_presatm .false. 321 set_namelist namelist_pisces ln_varpar .false. 322 set_namelist namelist_pisces ln_dust .false. 323 set_namelist namelist_pisces ln_solub .false. 324 set_namelist namelist_pisces ln_river .false. 325 set_namelist namelist_pisces ln_ndepo .false. 326 set_namelist namelist_pisces ln_ironsed .false. 327 set_namelist namelist_pisces ln_hydrofe .false. 328 # put ln_pisdmp to false : no relaxation to global mean value 329 set_namelist namelist_pisces ln_pisdmp .false. 331 330 cd ${SETTE_DIR} 332 331 cp BATCH_TEMPLATE/batch-${COMPILER} job_batch_template || exit … … 340 339 export TEST_NAME="REPRO_4_4" 341 340 cd ${SETTE_DIR} 342 . ../CONFIG/makenemo -m ${CMP_NAM} -n ORCA2LIMPIS_16 -r ORCA2_LIM_PISCES -j 8 add_key "key_mpp_ rep key_mpp_mpi"341 . ../CONFIG/makenemo -m ${CMP_NAM} -n ORCA2LIMPIS_16 -r ORCA2_LIM_PISCES -j 8 add_key "key_mpp_mpi key_mpp_rep" 343 342 cd ${SETTE_DIR} 344 343 . param.cfg … … 361 360 # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false 362 361 # if not you need input files, and for tests is not necessary 363 set_namelist namelist_pisces ln_ironsed .false. 364 set_namelist namelist_pisces ln_river .false. 365 set_namelist namelist_pisces ln_ndepo .false. 366 set_namelist namelist_pisces ln_dust .false. 367 set_namelist namelist_pisces ln_presatm .false. 362 set_namelist namelist_pisces ln_presatm .false. 363 set_namelist namelist_pisces ln_varpar .false. 364 set_namelist namelist_pisces ln_dust .false. 365 set_namelist namelist_pisces ln_solub .false. 366 set_namelist namelist_pisces ln_river .false. 367 set_namelist namelist_pisces ln_ndepo .false. 368 set_namelist namelist_pisces ln_ironsed .false. 369 set_namelist namelist_pisces ln_hydrofe .false. 370 # put ln_pisdmp to false : no relaxation to global mean value 371 set_namelist namelist_pisces ln_pisdmp .false. 368 372 cd ${SETTE_DIR} 369 373 cp BATCH_TEMPLATE/batch-${COMPILER} job_batch_template || exit … … 391 395 # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false 392 396 # if not you need input files, and for tests is not necessary 393 set_namelist namelist_pisces ln_ironsed .false. 394 set_namelist namelist_pisces ln_river .false. 395 set_namelist namelist_pisces ln_ndepo .false. 396 set_namelist namelist_pisces ln_dust .false. 397 set_namelist namelist_pisces ln_presatm .false. 397 set_namelist namelist_pisces ln_presatm .false. 398 set_namelist namelist_pisces ln_varpar .false. 399 set_namelist namelist_pisces ln_dust .false. 400 set_namelist namelist_pisces ln_solub .false. 401 set_namelist namelist_pisces ln_river .false. 402 set_namelist namelist_pisces ln_ndepo .false. 403 set_namelist namelist_pisces ln_ironsed .false. 404 set_namelist namelist_pisces ln_hydrofe .false. 405 # put ln_pisdmp to false : no relaxation to global mean value 406 set_namelist namelist_pisces ln_pisdmp .false. 398 407 cd ${SETTE_DIR} 399 408 cp BATCH_TEMPLATE/batch-${COMPILER} job_batch_template || exit … … 426 435 # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false 427 436 # if not you need input files, and for tests is not necessary 428 set_namelist namelist_pisces ln_ironsed .false. 429 set_namelist namelist_pisces ln_river .false. 430 set_namelist namelist_pisces ln_ndepo .false. 431 set_namelist namelist_pisces ln_dust .false. 432 set_namelist namelist_pisces ln_presatm .false. 437 set_namelist namelist_pisces ln_presatm .false. 438 set_namelist namelist_pisces ln_varpar .false. 439 set_namelist namelist_pisces ln_dust .false. 440 set_namelist namelist_pisces ln_solub .false. 441 set_namelist namelist_pisces ln_river .false. 442 set_namelist namelist_pisces ln_ndepo .false. 443 set_namelist namelist_pisces ln_ironsed .false. 444 set_namelist namelist_pisces ln_hydrofe .false. 433 445 cd ${SETTE_DIR} 434 446 cp BATCH_TEMPLATE/batch-${COMPILER} job_batch_template || exit … … 451 463 # put ln_ironsed, ln_river, ln_ndepo, ln_dust 452 464 # if not you need input files, and for tests is not necessary 453 set_namelist namelist_pisces ln_ironsed .false. 454 set_namelist namelist_pisces ln_river .false. 455 set_namelist namelist_pisces ln_ndepo .false. 456 set_namelist namelist_pisces ln_dust .false. 457 set_namelist namelist_pisces ln_presatm .false. 465 set_namelist namelist_pisces ln_presatm .false. 466 set_namelist namelist_pisces ln_varpar .false. 467 set_namelist namelist_pisces ln_dust .false. 468 set_namelist namelist_pisces ln_solub .false. 469 set_namelist namelist_pisces ln_river .false. 470 set_namelist namelist_pisces ln_ndepo .false. 471 set_namelist namelist_pisces ln_ironsed .false. 472 set_namelist namelist_pisces ln_hydrofe .false. 473 # put ln_pisdmp to false : no relaxation to global mean value 474 set_namelist namelist_pisces ln_pisdmp .false. 458 475 cd ${SETTE_DIR} 459 476 cp BATCH_TEMPLATE/batch-${COMPILER} job_batch_template || exit … … 467 484 export TEST_NAME="REPRO_4_4" 468 485 cd ${SETTE_DIR} 469 . ../CONFIG/makenemo -m ${CMP_NAM} -n ORCA2OFFPIS_16 -r ORCA2_OFF_PISCES -j 8 add_key "key_mpp_ rep key_mpp_mpi"486 . ../CONFIG/makenemo -m ${CMP_NAM} -n ORCA2OFFPIS_16 -r ORCA2_OFF_PISCES -j 8 add_key "key_mpp_mpi key_mpp_rep" 470 487 cd ${SETTE_DIR} 471 488 . param.cfg … … 486 503 # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false 487 504 # if not you need input files, and for tests is not necessary 488 set_namelist namelist_pisces ln_ironsed .false. 489 set_namelist namelist_pisces ln_river .false. 490 set_namelist namelist_pisces ln_ndepo .false. 491 set_namelist namelist_pisces ln_dust .false. 492 set_namelist namelist_pisces ln_presatm .false. 505 set_namelist namelist_pisces ln_presatm .false. 506 set_namelist namelist_pisces ln_varpar .false. 507 set_namelist namelist_pisces ln_dust .false. 508 set_namelist namelist_pisces ln_solub .false. 509 set_namelist namelist_pisces ln_river .false. 510 set_namelist namelist_pisces ln_ndepo .false. 511 set_namelist namelist_pisces ln_ironsed .false. 512 set_namelist namelist_pisces ln_hydrofe .false. 513 # put ln_pisdmp to false : no relaxation to global mean value 514 set_namelist namelist_pisces ln_pisdmp .false. 493 515 cd ${SETTE_DIR} 494 516 cp BATCH_TEMPLATE/batch-${COMPILER} job_batch_template || exit … … 514 536 # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false 515 537 # if not you need input files, and for tests is not necessary 516 set_namelist namelist_pisces ln_ironsed .false. 517 set_namelist namelist_pisces ln_river .false. 518 set_namelist namelist_pisces ln_ndepo .false. 519 set_namelist namelist_pisces ln_dust .false. 520 set_namelist namelist_pisces ln_presatm .false. 538 set_namelist namelist_pisces ln_presatm .false. 539 set_namelist namelist_pisces ln_varpar .false. 540 set_namelist namelist_pisces ln_dust .false. 541 set_namelist namelist_pisces ln_solub .false. 542 set_namelist namelist_pisces ln_river .false. 543 set_namelist namelist_pisces ln_ndepo .false. 544 set_namelist namelist_pisces ln_ironsed .false. 545 set_namelist namelist_pisces ln_hydrofe .false. 546 # put ln_pisdmp to false : no relaxation to global mean value 547 set_namelist namelist_pisces ln_pisdmp .false. 521 548 cd ${SETTE_DIR} 522 549 cp BATCH_TEMPLATE/batch-${COMPILER} job_batch_template || exit … … 584 611 export TEST_NAME="LONG" 585 612 cd ${SETTE_DIR} 586 . ../CONFIG/makenemo -m ${CMP_NAM} -n AMM12_LONG -r AMM12 -j 8 add_key "key_mpp_rep"613 . ../CONFIG/makenemo -m ${CMP_NAM} -n AMM12_LONG -r AMM12 -j 8 add_key "key_mpp_rep" 587 614 cd ${SETTE_DIR} 588 615 . param.cfg … … 639 666 export TEST_NAME="SHORT" 640 667 cd ${SETTE_DIR} 641 . ../CONFIG/makenemo -m ${CMP_NAM} -n ORCA2AGUL_1_2 -r ORCA2_LIM -j 8 add_key "key_mpp_ rep key_mpp_mpikey_agrif" del_key "key_zdftmx"668 . ../CONFIG/makenemo -m ${CMP_NAM} -n ORCA2AGUL_1_2 -r ORCA2_LIM -j 8 add_key "key_mpp_mpi key_mpp_rep key_agrif" del_key "key_zdftmx" 642 669 cd ${SETTE_DIR} 643 670 . param.cfg -
branches/2012/dev_r3438_LOCEAN15_PISLOB/NEMOGCM/SETTE/sette.sh.vargas
r3294 r3465 150 150 # TESTS FOR GYRE_LOBSTER CONFIGURATION 151 151 if [ ${config} -eq 1 ] ; then 152 ## Restartability tests for GYRE _LOBSTER152 ## Restartability tests for GYRE 153 153 export TEST_NAME="LONG" 154 154 cd ${SETTE_DIR} 155 . ../CONFIG/makenemo -m ${CMP_NAM} -n GYRE LOB_LONG -r GYRE_LOBSTERadd_key "key_mpp_mpi key_mpp_rep"156 cd ${SETTE_DIR} 157 . param.cfg 158 . all_functions.sh 159 . prepare_exe_dir.sh 160 cd ${EXE_DIR} 161 set_namelist namelist cn_exp \"GYRE LOB_LONG\"155 . ../CONFIG/makenemo -m ${CMP_NAM} -n GYRE_LONG -r GYRE add_key "key_mpp_mpi key_mpp_rep" 156 cd ${SETTE_DIR} 157 . param.cfg 158 . all_functions.sh 159 . prepare_exe_dir.sh 160 cd ${EXE_DIR} 161 set_namelist namelist cn_exp \"GYRE_LONG\" 162 162 set_namelist namelist nn_it000 1 163 163 set_namelist namelist nn_itend 120 … … 165 165 set_namelist namelist ln_clobber .true. 166 166 set_namelist namelist nn_solv 2 167 set_namelist namelist_top ln_diatrc .false.168 167 set_namelist namelist jpni 2 169 168 set_namelist namelist jpnj 2 … … 176 175 . prepare_exe_dir.sh 177 176 cd ${EXE_DIR} 178 set_namelist namelist cn_exp \"GYRE LOB_SHORT\"177 set_namelist namelist cn_exp \"GYRE_SHORT\" 179 178 set_namelist namelist nn_it000 61 180 179 set_namelist namelist nn_itend 120 … … 187 186 set_namelist namelist jpnj 2 188 187 set_namelist namelist jpnij 4 189 cp ..\/LONG\/GYRELOB_LONG_00000060_restart*.nc . 190 set_namelist namelist cn_ocerst_in \"GYRELOB_LONG_00000060_restart\" 191 set_namelist namelist_top ln_diatrc .false. 192 set_namelist namelist_top ln_rsttr .true. 193 set_namelist namelist_top nn_rsttr 2 194 set_namelist namelist_top cn_trcrst_in \"GYRELOB_LONG_00000060_restart_trc\" 188 cp ..\/LONG\/GYRE_LONG_00000060_restart*.nc . 189 set_namelist namelist cn_ocerst_in \"GYRE_LONG_00000060_restart\" 195 190 cd ${SETTE_DIR} 196 191 . ./fcm_job.sh input_GYRE.cfg 4 ${TEST_NAME} … … 198 193 199 194 if [ ${config} -eq 2 ] ; then 200 ## Repropducibility tests for GYRE _LOBSTER195 ## Repropducibility tests for GYRE 201 196 export TEST_NAME="REPRO_1_4" 202 197 cd ${SETTE_DIR} 203 . ../CONFIG/makenemo -m ${CMP_NAM} -n GYRE LOB_4 -r GYRE_LOBSTERadd_key "key_mpp_rep key_mpp_mpi"204 cd ${SETTE_DIR} 205 . param.cfg 206 . all_functions.sh 207 . prepare_exe_dir.sh 208 cd ${EXE_DIR} 209 set_namelist namelist cn_exp \"GYRE LOB_14\"198 . ../CONFIG/makenemo -m ${CMP_NAM} -n GYRE_4 -r GYRE add_key "key_mpp_rep key_mpp_mpi" 199 cd ${SETTE_DIR} 200 . param.cfg 201 . all_functions.sh 202 . prepare_exe_dir.sh 203 cd ${EXE_DIR} 204 set_namelist namelist cn_exp \"GYRE_14\" 210 205 set_namelist namelist nn_it000 1 211 206 set_namelist namelist nn_itend 60 … … 215 210 set_namelist namelist ln_clobber .true. 216 211 set_namelist namelist nn_solv 2 217 set_namelist namelist_top ln_diatrc .false.218 set_namelist namelist_top ln_trcdta .false.219 212 set_namelist namelist jpni 1 220 213 set_namelist namelist jpnj 4 … … 227 220 . prepare_exe_dir.sh 228 221 cd ${EXE_DIR} 229 set_namelist namelist cn_exp \"GYRE LOB_22\"222 set_namelist namelist cn_exp \"GYRE_22\" 230 223 set_namelist namelist nn_it000 1 231 224 set_namelist namelist nn_itend 60 … … 234 227 set_namelist namelist ln_clobber .true. 235 228 set_namelist namelist nn_solv 2 236 set_namelist namelist_top ln_diatrc .false.237 set_namelist namelist_top ln_trcdta .false.238 229 set_namelist namelist jpni 2 239 230 set_namelist namelist jpnj 2 … … 267 258 # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false 268 259 # if not you need input files, and for tests is not necessary 269 set_namelist namelist_pisces ln_ironsed .false. 270 set_namelist namelist_pisces ln_river .false. 271 set_namelist namelist_pisces ln_ndepo .false. 272 set_namelist namelist_pisces ln_dust .false. 273 set_namelist namelist_pisces ln_presatm .false. 260 set_namelist namelist_pisces ln_presatm .false. 261 set_namelist namelist_pisces ln_varpar .false. 262 set_namelist namelist_pisces ln_dust .false. 263 set_namelist namelist_pisces ln_solub .false. 264 set_namelist namelist_pisces ln_river .false. 265 set_namelist namelist_pisces ln_ndepo .false. 266 set_namelist namelist_pisces ln_ironsed .false. 267 set_namelist namelist_pisces ln_hydrofe .false. 274 268 cd ${SETTE_DIR} 275 269 . ./fcm_job.sh input_ORCA2_LIM_PISCES.cfg 4 ${TEST_NAME} … … 299 293 # put ln_ironsed, ln_river, ln_ndepo, ln_dust 300 294 # if not you need input files, and for tests is not necessary 301 set_namelist namelist_pisces ln_ironsed .false. 302 set_namelist namelist_pisces ln_river .false. 303 set_namelist namelist_pisces ln_ndepo .false. 304 set_namelist namelist_pisces ln_dust .false. 305 set_namelist namelist_pisces ln_presatm .false. 295 set_namelist namelist_pisces ln_presatm .false. 296 set_namelist namelist_pisces ln_varpar .false. 297 set_namelist namelist_pisces ln_dust .false. 298 set_namelist namelist_pisces ln_solub .false. 299 set_namelist namelist_pisces ln_river .false. 300 set_namelist namelist_pisces ln_ndepo .false. 301 set_namelist namelist_pisces ln_ironsed .false. 302 set_namelist namelist_pisces ln_hydrofe .false. 303 # put ln_pisdmp to false : no relaxation to global mean value 304 set_namelist namelist_pisces ln_pisdmp .false. 306 305 cd ${SETTE_DIR} 307 306 . ./fcm_job.sh input_ORCA2_LIM_PISCES.cfg 4 ${TEST_NAME} … … 331 330 # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false 332 331 # if not you need input files, and for tests is not necessary 333 set_namelist namelist_pisces ln_ironsed .false. 334 set_namelist namelist_pisces ln_river .false. 335 set_namelist namelist_pisces ln_ndepo .false. 336 set_namelist namelist_pisces ln_dust .false. 337 set_namelist namelist_pisces ln_presatm .false. 332 set_namelist namelist_pisces ln_presatm .false. 333 set_namelist namelist_pisces ln_varpar .false. 334 set_namelist namelist_pisces ln_dust .false. 335 set_namelist namelist_pisces ln_solub .false. 336 set_namelist namelist_pisces ln_river .false. 337 set_namelist namelist_pisces ln_ndepo .false. 338 set_namelist namelist_pisces ln_ironsed .false. 339 set_namelist namelist_pisces ln_hydrofe .false. 340 # put ln_pisdmp to false : no relaxation to global mean value 341 set_namelist namelist_pisces ln_pisdmp .false. 338 342 cd ${SETTE_DIR} 339 343 . ./fcm_job.sh input_ORCA2_LIM_PISCES.cfg 16 ${TEST_NAME} … … 356 360 # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false 357 361 # if not you need input files, and for tests is not necessary 358 set_namelist namelist_pisces ln_ironsed .false. 359 set_namelist namelist_pisces ln_river .false. 360 set_namelist namelist_pisces ln_ndepo .false. 361 set_namelist namelist_pisces ln_dust .false. 362 set_namelist namelist_pisces ln_presatm .false. 362 set_namelist namelist_pisces ln_presatm .false. 363 set_namelist namelist_pisces ln_varpar .false. 364 set_namelist namelist_pisces ln_dust .false. 365 set_namelist namelist_pisces ln_solub .false. 366 set_namelist namelist_pisces ln_river .false. 367 set_namelist namelist_pisces ln_ndepo .false. 368 set_namelist namelist_pisces ln_ironsed .false. 369 set_namelist namelist_pisces ln_hydrofe .false. 370 # put ln_pisdmp to false : no relaxation to global mean value 371 set_namelist namelist_pisces ln_pisdmp .false. 363 372 cd ${SETTE_DIR} 364 373 . ./fcm_job.sh input_ORCA2_LIM_PISCES.cfg 16 ${TEST_NAME} … … 388 397 # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false 389 398 # if not you need input files, and for tests is not necessary 390 set_namelist namelist_pisces ln_ironsed .false. 391 set_namelist namelist_pisces ln_river .false. 392 set_namelist namelist_pisces ln_ndepo .false. 393 set_namelist namelist_pisces ln_dust .false. 394 set_namelist namelist_pisces ln_presatm .false. 399 set_namelist namelist_pisces ln_presatm .false. 400 set_namelist namelist_pisces ln_varpar .false. 401 set_namelist namelist_pisces ln_dust .false. 402 set_namelist namelist_pisces ln_solub .false. 403 set_namelist namelist_pisces ln_river .false. 404 set_namelist namelist_pisces ln_ndepo .false. 405 set_namelist namelist_pisces ln_ironsed .false. 406 set_namelist namelist_pisces ln_hydrofe .false. 395 407 cd ${SETTE_DIR} 396 408 . ./fcm_job.sh input_ORCA2_OFF_PISCES.cfg 4 ${TEST_NAME} … … 415 427 # put ln_ironsed, ln_river, ln_ndepo, ln_dust 416 428 # if not you need input files, and for tests is not necessary 417 set_namelist namelist_pisces ln_ironsed .false. 418 set_namelist namelist_pisces ln_river .false. 419 set_namelist namelist_pisces ln_ndepo .false. 420 set_namelist namelist_pisces ln_dust .false. 421 set_namelist namelist_pisces ln_presatm .false. 429 set_namelist namelist_pisces ln_presatm .false. 430 set_namelist namelist_pisces ln_varpar .false. 431 set_namelist namelist_pisces ln_dust .false. 432 set_namelist namelist_pisces ln_solub .false. 433 set_namelist namelist_pisces ln_river .false. 434 set_namelist namelist_pisces ln_ndepo .false. 435 set_namelist namelist_pisces ln_ironsed .false. 436 set_namelist namelist_pisces ln_hydrofe .false. 437 # put ln_pisdmp to false : no relaxation to global mean value 438 set_namelist namelist_pisces ln_pisdmp .false. 422 439 cd ${SETTE_DIR} 423 440 . ./fcm_job.sh input_ORCA2_OFF_PISCES.cfg 4 ${TEST_NAME} … … 445 462 # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false 446 463 # if not you need input files, and for tests is not necessary 447 set_namelist namelist_pisces ln_ironsed .false. 448 set_namelist namelist_pisces ln_river .false. 449 set_namelist namelist_pisces ln_ndepo .false. 450 set_namelist namelist_pisces ln_dust .false. 451 set_namelist namelist_pisces ln_presatm .false. 464 set_namelist namelist_pisces ln_presatm .false. 465 set_namelist namelist_pisces ln_varpar .false. 466 set_namelist namelist_pisces ln_dust .false. 467 set_namelist namelist_pisces ln_solub .false. 468 set_namelist namelist_pisces ln_river .false. 469 set_namelist namelist_pisces ln_ndepo .false. 470 set_namelist namelist_pisces ln_ironsed .false. 471 set_namelist namelist_pisces ln_hydrofe .false. 472 # put ln_pisdmp to false : no relaxation to global mean value 473 set_namelist namelist_pisces ln_pisdmp .false. 452 474 cd ${SETTE_DIR} 453 475 . ./fcm_job.sh input_ORCA2_OFF_PISCES.cfg 16 ${TEST_NAME} … … 468 490 # put ln_ironsed, ln_river, ln_ndepo, ln_dust to false 469 491 # if not you need input files, and for tests is not necessary 470 set_namelist namelist_pisces ln_ironsed .false. 471 set_namelist namelist_pisces ln_river .false. 472 set_namelist namelist_pisces ln_ndepo .false. 473 set_namelist namelist_pisces ln_dust .false. 474 set_namelist namelist_pisces ln_presatm .false. 492 set_namelist namelist_pisces ln_presatm .false. 493 set_namelist namelist_pisces ln_varpar .false. 494 set_namelist namelist_pisces ln_dust .false. 495 set_namelist namelist_pisces ln_solub .false. 496 set_namelist namelist_pisces ln_river .false. 497 set_namelist namelist_pisces ln_ndepo .false. 498 set_namelist namelist_pisces ln_ironsed .false. 499 set_namelist namelist_pisces ln_hydrofe .false. 500 # put ln_pisdmp to false : no relaxation to global mean value 501 set_namelist namelist_pisces ln_pisdmp .false. 475 502 cd ${SETTE_DIR} 476 503 . ./fcm_job.sh input_ORCA2_OFF_PISCES.cfg 16 ${TEST_NAME}
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