- Timestamp:
- 2016-01-08T10:35:19+01:00 (8 years ago)
- File:
-
- 1 edited
Legend:
- Unmodified
- Added
- Removed
-
branches/2014/dev_r4704_NOC5_MPP_BDY_UPDATE/NEMOGCM/NEMO/OPA_SRC/nemogcm.F90
r4671 r6225 28 28 !! - ! 2010-10 (C. Ethe, G. Madec) reorganisation of initialisation phase 29 29 !! 3.3.1! 2011-01 (A. R. Porter, STFC Daresbury) dynamical allocation 30 !! 3.4 ! 2011-11 (C. Harris) decomposition changes for running with CICE 31 !! ! 2012-05 (C. Calone, J. Simeon, G. Madec, C. Ethe) Add grid coarsening 30 !! 3.4 ! 2011-10 (A. C. Coward, NOCS & J. Donners, PRACE) add nemo_northcomms 31 !! - ! 2011-11 (C. Harris) decomposition changes for running with CICE 32 !! 3.6 ! 2012-05 (C. Calone, J. Simeon, G. Madec, C. Ethe) Add grid coarsening 33 !! - ! 2013-06 (I. Epicoco, S. Mocavero, CMCC) nemo_northcomms: setup avoiding MPI communication 34 !! - ! 2014-12 (G. Madec) remove KPP scheme and cross-land advection (cla) 32 35 !!---------------------------------------------------------------------- 33 36 34 37 !!---------------------------------------------------------------------- 35 !! nemo_gcm 36 !! nemo_init 37 !! nemo_ctl 38 !! nemo_closefile 39 !! nemo_alloc 40 !! nemo_partition 41 !! factorise 38 !! nemo_gcm : solve ocean dynamics, tracer, biogeochemistry and/or sea-ice 39 !! nemo_init : initialization of the NEMO system 40 !! nemo_ctl : initialisation of the contol print 41 !! nemo_closefile: close remaining open files 42 !! nemo_alloc : dynamical allocation 43 !! nemo_partition: calculate MPP domain decomposition 44 !! factorise : calculate the factors of the no. of MPI processes 42 45 !!---------------------------------------------------------------------- 43 USE step_oce ! module used in the ocean time stepping module 44 USE sbc_oce ! surface boundary condition: ocean 45 USE cla ! cross land advection (tra_cla routine) 46 USE domcfg ! domain configuration (dom_cfg routine) 47 USE mppini ! shared/distributed memory setting (mpp_init routine) 48 USE domain ! domain initialization (dom_init routine) 46 USE step_oce ! module used in the ocean time stepping module (step.F90) 47 USE domcfg ! domain configuration (dom_cfg routine) 48 USE mppini ! shared/distributed memory setting (mpp_init routine) 49 USE domain ! domain initialization (dom_init routine) 49 50 #if defined key_nemocice_decomp 50 51 USE ice_domain_size, only: nx_global, ny_global 51 52 #endif 52 USE tideini 53 USE bdyini ! open boundary cond. initialization(bdy_init routine)54 USE bdydta ! open boundary cond. initialization(bdy_dta_init routine)55 USE bdytides ! open boundary cond. initialization(bdytide_init routine)56 USE istate ! initial state setting (istate_init routine)57 USE ldfdyn ! lateral viscosity setting (ldfdyn_init routine)58 USE ldf tra ! lateral diffusivity setting (ldftra_init routine)59 USE zdfini ! vertical physics setting (zdf_init routine)60 USE phycst ! physical constant (par_cst routine)61 USE trdmod ! momentum/tracers trends (trd_mod_init routine)62 USE asminc ! assimilation increments63 USE asm bkg ! writing out state trajectory64 USE diaptr ! poleward transports (dia_ptr_init routine)65 USE dia dct ! sections transports (dia_dct_init routine)66 USE dia obs ! Observation diagnostics (dia_obs_init routine)67 USE lib_fortran ! Fortran utilities (allows no signed zero when 'key_nosignedzero' defined)68 USE step ! NEMO time-stepping (stproutine)69 USE icbini ! handle bergs, initialisation70 USE icbstp ! handle bergs, calving, themodynamics and transport71 #if defined key_oasis3 72 USE cpl_oasis3 ! OASIS3 coupling73 #elif defined key_oasis4 74 USE c pl_oasis4 ! OASIS4 coupling (not working)75 #endif 76 USE c1d ! 1D configuration77 USE st ep_c1d ! Time stepping loop for the 1D configuration78 USE dyndmp ! Momentum damping53 USE tideini ! tidal components initialization (tide_ini routine) 54 USE bdyini ! open boundary cond. setting (bdy_init routine) 55 USE bdydta ! open boundary cond. setting (bdy_dta_init routine) 56 USE bdytides ! open boundary cond. setting (bdytide_init routine) 57 USE sbctide, ONLY : lk_tide 58 USE istate ! initial state setting (istate_init routine) 59 USE ldfdyn ! lateral viscosity setting (ldfdyn_init routine) 60 USE ldftra ! lateral diffusivity setting (ldftra_init routine) 61 USE zdfini ! vertical physics setting (zdf_init routine) 62 USE phycst ! physical constant (par_cst routine) 63 USE trdini ! dyn/tra trends initialization (trd_init routine) 64 USE asminc ! assimilation increments 65 USE asmbkg ! writing out state trajectory 66 USE diaptr ! poleward transports (dia_ptr_init routine) 67 USE diadct ! sections transports (dia_dct_init routine) 68 USE diaobs ! Observation diagnostics (dia_obs_init routine) 69 USE diacfl ! CFL diagnostics (dia_cfl_init routine) 70 USE lib_fortran ! Fortran utilities (allows no signed zero when 'key_nosignedzero' defined) 71 USE step ! NEMO time-stepping (stp routine) 72 USE icbini ! handle bergs, initialisation 73 USE icbstp ! handle bergs, calving, themodynamics and transport 74 USE cpl_oasis3 ! OASIS3 coupling 75 USE c1d ! 1D configuration 76 USE step_c1d ! Time stepping loop for the 1D configuration 77 USE dyndmp ! Momentum damping 78 USE stopar ! Stochastic param.: ??? 79 USE stopts ! Stochastic param.: ??? 79 80 #if defined key_top 80 USE trcini ! passive tracer initialisation 81 #endif 82 USE lib_mpp ! distributed memory computing 81 USE trcini ! passive tracer initialisation 82 #endif 83 USE lib_mpp ! distributed memory computing 84 USE diurnal_bulk ! diurnal bulk SST 85 USE step_diu ! diurnal bulk SST timestepping (called from here if run offline) 83 86 #if defined key_iomput 84 USE xios 85 #endif 86 USE sbctide, ONLY: lk_tide 87 USE crsini ! initialise grid coarsening utility 88 USE lbcnfd, ONLY: isendto, nsndto, nfsloop, nfeloop ! Setup of north fold exchanges 87 USE xios ! xIOserver 88 #endif 89 USE crsini ! initialise grid coarsening utility 90 USE lbcnfd , ONLY : isendto, nsndto, nfsloop, nfeloop ! Setup of north fold exchanges 91 USE sbc_oce, ONLY : lk_oasis 92 USE diatmb ! Top,middle,bottom output 93 USE dia25h ! 25h mean output 94 USE wet_dry ! Wetting and drying setting (wad_init routine) 89 95 90 96 IMPLICIT NONE … … 98 104 99 105 !!---------------------------------------------------------------------- 100 !! NEMO/OPA 4.0 , NEMO Consortium (2011)106 !! NEMO/OPA 3.7 , NEMO Consortium (2015) 101 107 !! $Id$ 102 108 !! Software governed by the CeCILL licence (NEMOGCM/NEMO_CeCILL.txt) … … 121 127 !!---------------------------------------------------------------------- 122 128 ! 123 124 129 #if defined key_agrif 125 130 CALL Agrif_Init_Grids() ! AGRIF: set the meshes … … 139 144 # endif 140 145 #endif 141 142 146 ! check that all process are still there... If some process have an error, 143 147 ! they will never enter in step and other processes will wait until the end of the cpu time! … … 165 169 ENDIF 166 170 171 #if defined key_agrif 172 CALL Agrif_Regrid() 173 #endif 174 167 175 DO WHILE ( istp <= nitend .AND. nstop == 0 ) 168 169 176 #if defined key_agrif 170 CALL Agrif_Step( stp )! AGRIF: time stepping177 CALL stp ! AGRIF: time stepping 171 178 #else 172 CALL stp( istp ) ! standard time stepping 173 #endif 174 179 IF ( .NOT. ln_diurnal_only ) THEN 180 CALL stp( istp ) ! standard time stepping 181 ELSE 182 CALL stp_diurnal( istp ) ! time step only the diurnal SST 183 ENDIF 184 #endif 175 185 istp = istp + 1 176 186 IF( lk_mpp ) CALL mpp_max( nstop ) … … 178 188 #endif 179 189 180 IF( l k_diaobs ) CALL dia_obs_wri190 IF( ln_diaobs ) CALL dia_obs_wri 181 191 ! 182 192 IF( ln_icebergs ) CALL icb_end( nitend ) … … 193 203 ! 194 204 #if defined key_agrif 195 CALL Agrif_ParentGrid_To_ChildGrid() 196 IF( lk_diaobs ) CALL dia_obs_wri 205 IF( .NOT. Agrif_Root() ) THEN 206 CALL Agrif_ParentGrid_To_ChildGrid() 207 IF( ln_diaobs ) CALL dia_obs_wri 208 IF( nn_timing == 1 ) CALL timing_finalize 209 CALL Agrif_ChildGrid_To_ParentGrid() 210 ENDIF 211 #endif 197 212 IF( nn_timing == 1 ) CALL timing_finalize 198 CALL Agrif_ChildGrid_To_ParentGrid()199 #endif200 IF( nn_timing == 1 ) CALL timing_finalize201 213 ! 202 214 CALL nemo_closefile 215 ! 203 216 #if defined key_iomput 204 CALL xios_finalize ! end mpp communications with xios 205 # if defined key_oasis3 || defined key_oasis4 206 CALL cpl_prism_finalize ! end coupling and mpp communications with OASIS 207 # endif 217 CALL xios_finalize ! end mpp communications with xios 218 IF( lk_oasis ) CALL cpl_finalize ! end coupling and mpp communications with OASIS 208 219 #else 209 # if defined key_oasis3 || defined key_oasis4 210 CALL cpl_prism_finalize! end coupling and mpp communications with OASIS211 # else 212 IF( lk_mpp ) CALL mppstop! end mpp communications213 # endif 220 IF( lk_oasis ) THEN 221 CALL cpl_finalize ! end coupling and mpp communications with OASIS 222 ELSE 223 IF( lk_mpp ) CALL mppstop ! end mpp communications 224 ENDIF 214 225 #endif 215 226 ! … … 227 238 INTEGER :: ios 228 239 CHARACTER(len=80), DIMENSION(16) :: cltxt 229 ! !230 NAMELIST/namctl/ ln_ctl , nn_print, nn_ictls, nn_ictle, &240 ! 241 NAMELIST/namctl/ ln_ctl , nn_print, nn_ictls, nn_ictle, & 231 242 & nn_isplt, nn_jsplt, nn_jctls, nn_jctle, & 232 & nn_bench, nn_timing 243 & nn_bench, nn_timing, nn_diacfl 233 244 NAMELIST/namcfg/ cp_cfg, cp_cfz, jp_cfg, jpidta, jpjdta, jpkdta, jpiglo, jpjglo, & 234 & jpizoom, jpjzoom, jperio 245 & jpizoom, jpjzoom, jperio, ln_use_jattr 235 246 !!---------------------------------------------------------------------- 236 247 ! 237 248 cltxt = '' 249 cxios_context = 'nemo' 238 250 ! 239 251 ! ! Open reference namelist and configuration namelist files … … 271 283 nperio = 0 272 284 jperio = 0 285 ln_use_jattr = .false. 273 286 ENDIF 274 287 #endif … … 281 294 #if defined key_iomput 282 295 IF( Agrif_Root() ) THEN 283 # if defined key_oasis3 || defined key_oasis4 284 CALL cpl_prism_init( ilocal_comm ) ! nemo local communicator given by oasis 285 CALL xios_initialize( "oceanx",local_comm=ilocal_comm ) 286 # else 287 CALL xios_initialize( "nemo",return_comm=ilocal_comm ) 288 # endif 289 ENDIF 290 narea = mynode( cltxt, numnam_ref, numnam_cfg, numond , nstop, ilocal_comm ) ! Nodes selection 296 IF( lk_oasis ) THEN 297 CALL cpl_init( "oceanx", ilocal_comm ) ! nemo local communicator given by oasis 298 CALL xios_initialize( "not used",local_comm=ilocal_comm ) ! send nemo communicator to xios 299 ELSE 300 CALL xios_initialize( "for_xios_mpi_id",return_comm=ilocal_comm ) ! nemo local communicator given by xios 301 ENDIF 302 ENDIF 303 ! Nodes selection (control print return in cltxt) 304 narea = mynode( cltxt, 'output.namelist.dyn', numnam_ref, numnam_cfg, numond , nstop, ilocal_comm ) 291 305 #else 292 # if defined key_oasis3 || defined key_oasis4 293 IF( Agrif_Root() ) THEN 294 CALL cpl_prism_init( ilocal_comm ) ! nemo local communicator given by oasis 295 ENDIF 296 narea = mynode( cltxt, numnam_ref, numnam_cfg, numond , nstop, ilocal_comm ) ! Nodes selection (control print return in cltxt) 297 # else 298 ilocal_comm = 0 299 narea = mynode( cltxt, numnam_ref, numnam_cfg, numond , nstop ) ! Nodes selection (control print return in cltxt) 300 # endif 306 IF( lk_oasis ) THEN 307 IF( Agrif_Root() ) THEN 308 CALL cpl_init( "oceanx", ilocal_comm ) ! nemo local communicator given by oasis 309 ENDIF 310 ! Nodes selection (control print return in cltxt) 311 narea = mynode( cltxt, 'output.namelist.dyn', numnam_ref, numnam_cfg, numond , nstop, ilocal_comm ) 312 ELSE 313 ilocal_comm = 0 314 ! Nodes selection (control print return in cltxt) 315 narea = mynode( cltxt, 'output.namelist.dyn', numnam_ref, numnam_cfg, numond , nstop ) 316 ENDIF 301 317 #endif 302 318 narea = narea + 1 ! mynode return the rank of proc (0 --> jpnij -1 ) … … 315 331 ! If dimensions of processor grid weren't specified in the namelist file 316 332 ! then we calculate them here now that we have our communicator size 317 IF( (jpni < 1) .OR. (jpnj < 1) )THEN333 IF( jpni < 1 .OR. jpnj < 1 ) THEN 318 334 #if defined key_mpp_mpi 319 IF( Agrif_Root() ) CALL nemo_partition(mppsize)335 IF( Agrif_Root() ) CALL nemo_partition( mppsize ) 320 336 #else 321 337 jpni = 1 … … 323 339 jpnij = jpni*jpnj 324 340 #endif 325 END 341 ENDIF 326 342 327 343 ! Calculate domain dimensions given calculated jpni and jpnj 328 ! This used to be done in par_oce.F90 when they were parameters rather 329 ! than variables 344 ! This used to be done in par_oce.F90 when they were parameters rather than variables 330 345 IF( Agrif_Root() ) THEN 331 346 #if defined key_nemocice_decomp 332 jpi = ( nx_global+2-2*jpreci + (jpni-1) ) / jpni + 2*jpreci ! first dim.333 jpj = ( ny_global+2-2*jprecj + (jpnj-1) ) / jpnj + 2*jprecj ! second dim.347 jpi = ( nx_global+2-2*jpreci + (jpni-1) ) / jpni + 2*jpreci ! first dim. 348 jpj = ( ny_global+2-2*jprecj + (jpnj-1) ) / jpnj + 2*jprecj ! second dim. 334 349 #else 335 jpi = ( jpiglo -2*jpreci + (jpni-1) ) / jpni + 2*jpreci! first dim.336 jpj = ( jpjglo -2*jprecj + (jpnj-1) ) / jpnj + 2*jprecj! second dim.337 #endif 338 ENDIF 350 jpi = ( jpiglo -2*jpreci + (jpni-1) ) / jpni + 2*jpreci ! first dim. 351 jpj = ( jpjglo -2*jprecj + (jpnj-1) ) / jpnj + 2*jprecj ! second dim. 352 #endif 353 ENDIF 339 354 jpk = jpkdta ! third dim 355 #if defined key_agrif 356 ! simple trick to use same vertical grid as parent but different number of levels: 357 ! Save maximum number of levels in jpkdta, then define all vertical grids with this number. 358 ! Suppress once vertical online interpolation is ok 359 IF(.NOT.Agrif_Root()) jpkdta = Agrif_Parent( jpkdta ) 360 #endif 340 361 jpim1 = jpi-1 ! inner domain indices 341 362 jpjm1 = jpj-1 ! " " … … 351 372 WRITE(numout,*) ' NEMO team' 352 373 WRITE(numout,*) ' Ocean General Circulation Model' 353 WRITE(numout,*) ' version 3. 4 (2011) '374 WRITE(numout,*) ' version 3.7 (2015) ' 354 375 WRITE(numout,*) 355 376 WRITE(numout,*) … … 382 403 CALL eos_init ! Equation of state 383 404 IF( lk_c1d ) CALL c1d_init ! 1D column configuration 405 CALL wad_init ! Wetting and drying options 384 406 CALL dom_cfg ! Domain configuration 385 407 CALL dom_init ! Domain 386 387 IF( ln_nnogather ) CALL nemo_northcomms ! Initialise the northfold neighbour lists (must be done after the masks are defined) 388 408 IF( ln_crs ) CALL crs_init ! coarsened grid: domain initialization 409 IF( ln_nnogather ) CALL nemo_northcomms! northfold neighbour lists (must be done after the masks are defined) 389 410 IF( ln_ctl ) CALL prt_ctl_init ! Print control 390 411 412 CALL diurnal_sst_bulk_init ! diurnal sst 413 IF ( ln_diurnal ) CALL diurnal_sst_coolskin_init ! cool skin 414 415 ! IF ln_diurnal_only, then we only want a subset of the initialisation routines 416 IF ( ln_diurnal_only ) THEN 417 CALL istate_init ! ocean initial state (Dynamics and tracers) 418 CALL sbc_init ! Forcings : surface module 419 CALL tra_qsr_init ! penetrative solar radiation qsr 420 IF( ln_diaobs ) THEN ! Observation & model comparison 421 CALL dia_obs_init ! Initialize observational data 422 CALL dia_obs( nit000 - 1 ) ! Observation operator for restart 423 ENDIF 424 ! ! Assimilation increments 425 IF( lk_asminc ) CALL asm_inc_init ! Initialize assimilation increments 426 427 IF(lwp) WRITE(numout,*) 'Euler time step switch is ', neuler 428 RETURN 429 ENDIF 430 391 431 CALL istate_init ! ocean initial state (Dynamics and tracers) 392 432 393 IF( lk_tide ) CALL tide_init( nit000 ) ! Initialisation of the tidal harmonics 394 395 IF( lk_bdy ) CALL bdy_init ! Open boundaries initialisation 396 IF( lk_bdy ) CALL bdy_dta_init ! Open boundaries initialisation of external data arrays 433 ! ! external forcing 434 !!gm to be added : creation and call of sbc_apr_init 435 IF( lk_tide ) CALL tide_init ! tidal harmonics 436 CALL sbc_init ! surface boundary conditions (including sea-ice) 437 !!gm ==>> bdy_init should call bdy_dta_init and bdytide_init NOT in nemogcm !!! 438 IF( lk_bdy ) CALL bdy_init ! Open boundaries initialisation 439 IF( lk_bdy ) CALL bdy_dta_init ! Open boundaries initialisation of external data arrays 397 440 IF( lk_bdy .AND. lk_tide ) & 398 & CALL bdytide_init ! Open boundaries initialisation of tidal harmonic forcing 399 400 CALL dyn_nept_init ! simplified form of Neptune effect 401 402 ! 403 IF( ln_crs ) CALL crs_init ! Domain initialization of coarsened grid 404 ! 405 ! Ocean physics 406 CALL sbc_init ! Forcings : surface module 441 & CALL bdytide_init ! Open boundaries initialisation of tidal harmonic forcing 442 443 ! ! Ocean physics 407 444 ! ! Vertical physics 408 409 445 CALL zdf_init ! namelist read 410 411 446 CALL zdf_bfr_init ! bottom friction 412 413 447 IF( lk_zdfric ) CALL zdf_ric_init ! Richardson number dependent Kz 414 448 IF( lk_zdftke ) CALL zdf_tke_init ! TKE closure scheme 415 449 IF( lk_zdfgls ) CALL zdf_gls_init ! GLS closure scheme 416 IF( lk_zdfkpp ) CALL zdf_kpp_init ! KPP closure scheme417 450 IF( lk_zdftmx ) CALL zdf_tmx_init ! tidal vertical mixing 418 IF( lk_zdfddm .AND. .NOT. lk_zdfkpp ) &419 & CALL zdf_ddm_init ! double diffusive mixing451 IF( lk_zdfddm ) CALL zdf_ddm_init ! double diffusive mixing 452 420 453 ! ! Lateral physics 421 454 CALL ldf_tra_init ! Lateral ocean tracer physics 455 CALL ldf_eiv_init ! eddy induced velocity param. 422 456 CALL ldf_dyn_init ! Lateral ocean momentum physics 423 IF( lk_ldfslp ) CALL ldf_slp_init ! slope of lateral mixing 424 425 ! ! Active tracers 426 CALL tra_qsr_init ! penetrative solar radiation qsr 427 CALL tra_bbc_init ! bottom heat flux 428 IF( lk_trabbl ) CALL tra_bbl_init ! advective (and/or diffusive) bottom boundary layer scheme 429 CALL tra_dmp_init ! internal damping trends- tracers 430 CALL tra_adv_init ! horizontal & vertical advection 431 CALL tra_ldf_init ! lateral mixing 432 CALL tra_zdf_init ! vertical mixing and after tracer fields 433 434 ! ! Dynamics 435 IF( lk_c1d ) CALL dyn_dmp_init ! internal damping trends- momentum 436 CALL dyn_adv_init ! advection (vector or flux form) 437 CALL dyn_vor_init ! vorticity term including Coriolis 438 CALL dyn_ldf_init ! lateral mixing 439 CALL dyn_hpg_init ! horizontal gradient of Hydrostatic pressure 440 CALL dyn_zdf_init ! vertical diffusion 441 CALL dyn_spg_init ! surface pressure gradient 442 443 ! ! Misc. options 444 IF( nn_cla == 1 .AND. cp_cfg == 'orca' .AND. jp_cfg == 2 ) CALL cla_init ! Cross Land Advection 457 458 ! ! Active tracers 459 CALL tra_qsr_init ! penetrative solar radiation qsr 460 CALL tra_bbc_init ! bottom heat flux 461 IF( lk_trabbl ) CALL tra_bbl_init ! advective (and/or diffusive) bottom boundary layer scheme 462 CALL tra_dmp_init ! internal tracer damping 463 CALL tra_adv_init ! horizontal & vertical advection 464 CALL tra_ldf_init ! lateral mixing 465 CALL tra_zdf_init ! vertical mixing and after tracer fields 466 467 ! ! Dynamics 468 IF( lk_c1d ) CALL dyn_dmp_init ! internal momentum damping 469 CALL dyn_adv_init ! advection (vector or flux form) 470 CALL dyn_vor_init ! vorticity term including Coriolis 471 CALL dyn_ldf_init ! lateral mixing 472 CALL dyn_hpg_init ! horizontal gradient of Hydrostatic pressure 473 CALL dyn_zdf_init ! vertical diffusion 474 CALL dyn_spg_init ! surface pressure gradient 475 476 #if defined key_top 477 ! ! Passive tracers 478 CALL trc_init 479 #endif 480 IF( l_ldfslp ) CALL ldf_slp_init ! slope of lateral mixing 481 482 ! ! Icebergs 445 483 CALL icb_init( rdt, nit000) ! initialise icebergs instance 484 485 ! ! Misc. options 486 CALL sto_par_init ! Stochastic parametrization 487 IF( ln_sto_eos ) CALL sto_pts_init ! RRandom T/S fluctuations 446 488 447 #if defined key_top 448 ! ! Passive tracers 449 CALL trc_init 450 #endif 451 ! 452 453 ! Diagnostics 489 ! ! Diagnostics 454 490 IF( lk_floats ) CALL flo_init ! drifting Floats 491 CALL dia_cfl_init ! Initialise CFL diagnostics 455 492 IF( lk_diaar5 ) CALL dia_ar5_init ! ar5 diag 456 493 CALL dia_ptr_init ! Poleward TRansports initialization 457 494 IF( lk_diadct ) CALL dia_dct_init ! Sections tranports 458 495 CALL dia_hsb_init ! heat content, salt content and volume budgets 459 CALL trd_mod_init ! Mixed-layer/Vorticity/Integral constraints trends 460 IF( lk_diaobs ) THEN ! Observation & model comparison 496 CALL trd_init ! Mixed-layer/Vorticity/Integral constraints trends 461 497 CALL dia_obs_init ! Initialize observational data 462 463 ENDIF 464 ! ! Assimilation increments498 IF( ln_diaobs ) CALL dia_obs( nit000 - 1 ) ! Observation operator for restart 499 500 ! ! Assimilation increments 465 501 IF( lk_asminc ) CALL asm_inc_init ! Initialize assimilation increments 466 502 IF(lwp) WRITE(numout,*) 'Euler time step switch is ', neuler 503 CALL dia_tmb_init ! TMB outputs 504 CALL dia_25h_init ! 25h mean outputs 505 467 506 ! 468 507 END SUBROUTINE nemo_init … … 509 548 WRITE(numout,*) '~~~~~~~ ' 510 549 WRITE(numout,*) ' Namelist namcfg' 511 WRITE(numout,*) ' configuration name cp_cfg= ', TRIM(cp_cfg)512 WRITE(numout,*) ' configuration zoom name cp_cfz= ', TRIM(cp_cfz)513 WRITE(numout,*) ' configuration resolution jp_cfg= ', jp_cfg514 WRITE(numout,*) ' 1st lateral dimension ( >= jpi ) jpidta= ', jpidta515 WRITE(numout,*) ' 2nd " " ( >= jpj ) jpjdta= ', jpjdta516 WRITE(numout,*) ' 3nd " " jpkdta= ', jpkdta517 WRITE(numout,*) ' 1st dimension of global domain in i jpiglo = ', jpiglo518 WRITE(numout,*) ' 2nd - - in j jpjglo = ', jpjglo550 WRITE(numout,*) ' configuration name cp_cfg = ', TRIM(cp_cfg) 551 WRITE(numout,*) ' configuration zoom name cp_cfz = ', TRIM(cp_cfz) 552 WRITE(numout,*) ' configuration resolution jp_cfg = ', jp_cfg 553 WRITE(numout,*) ' 1st lateral dimension ( >= jpiglo ) jpidta = ', jpidta 554 WRITE(numout,*) ' 2nd " " ( >= jpjglo ) jpjdta = ', jpjdta 555 WRITE(numout,*) ' 3nd " " jpkdta = ', jpkdta 556 WRITE(numout,*) ' 1st dimension of global domain in i jpiglo = ', jpiglo 557 WRITE(numout,*) ' 2nd - - in j jpjglo = ', jpjglo 519 558 WRITE(numout,*) ' left bottom i index of the zoom (in data domain) jpizoom = ', jpizoom 520 559 WRITE(numout,*) ' left bottom j index of the zoom (in data domain) jpizoom = ', jpjzoom 521 WRITE(numout,*) ' lateral cond. type (between 0 and 6) jperio = ', jperio 560 WRITE(numout,*) ' lateral cond. type (between 0 and 6) jperio = ', jperio 561 WRITE(numout,*) ' use file attribute if exists as i/p j-start ln_use_jattr = ', ln_use_jattr 522 562 ENDIF 523 563 ! ! Parameter control … … 568 608 ENDIF 569 609 ! 570 IF( lk_c1d .AND. .NOT.lk_iomput ) CALL ctl_stop( 'nemo_ctl: The 1D configuration must be used ', &571 & 'with the IOM Input/Output manager. ' , &572 & 'Compile with key_iomput enabled' )573 !574 610 IF( 1_wp /= SIGN(1._wp,-0._wp) ) CALL ctl_stop( 'nemo_ctl: The intrinsec SIGN function follows ', & 575 611 & 'f2003 standard. ' , & … … 603 639 IF( numdct_heat /= -1 ) CLOSE( numdct_heat ) ! heat transports 604 640 IF( numdct_salt /= -1 ) CLOSE( numdct_salt ) ! salt transports 605 606 641 ! 607 642 numout = 6 ! redefine numout in case it is used after this point... … … 620 655 USE diawri , ONLY: dia_wri_alloc 621 656 USE dom_oce , ONLY: dom_oce_alloc 622 USE ldfdyn_oce, ONLY: ldfdyn_oce_alloc623 USE ldftra_oce, ONLY: ldftra_oce_alloc624 657 USE trc_oce , ONLY: trc_oce_alloc 625 658 #if defined key_diadct … … 636 669 ierr = ierr + dia_wri_alloc () 637 670 ierr = ierr + dom_oce_alloc () ! ocean domain 638 ierr = ierr + ldfdyn_oce_alloc() ! ocean lateral physics : dynamics639 ierr = ierr + ldftra_oce_alloc() ! ocean lateral physics : tracers640 671 ierr = ierr + zdf_oce_alloc () ! ocean vertical physics 641 672 ! … … 663 694 !! ** Method : 664 695 !!---------------------------------------------------------------------- 665 INTEGER, INTENT(in) :: num_pes! The number of MPI processes we have696 INTEGER, INTENT(in) :: num_pes ! The number of MPI processes we have 666 697 ! 667 698 INTEGER, PARAMETER :: nfactmax = 20 … … 672 703 INTEGER, DIMENSION(nfactmax) :: ifact ! Array of factors 673 704 !!---------------------------------------------------------------------- 674 705 ! 675 706 ierr = 0 676 707 ! 677 708 CALL factorise( ifact, nfactmax, nfact, num_pes, ierr ) 678 709 ! 679 710 IF( nfact <= 1 ) THEN 680 711 WRITE (numout, *) 'WARNING: factorisation of number of PEs failed' … … 717 748 INTEGER :: ifac, jl, inu 718 749 INTEGER, PARAMETER :: ntest = 14 719 INTEGER :: ilfax(ntest) 720 750 INTEGER, DIMENSION(ntest) :: ilfax 751 !!---------------------------------------------------------------------- 752 ! 721 753 ! lfax contains the set of allowed factors. 722 data (ilfax(jl),jl=1,ntest) / 16384, 8192, 4096, 2048, 1024, 512, 256, & 723 & 128, 64, 32, 16, 8, 4, 2 / 724 !!---------------------------------------------------------------------- 725 754 ilfax(:) = (/(2**jl,jl=ntest,1,-1)/) 755 ! 726 756 ! Clear the error flag and initialise output vars 727 kerr = 0728 kfax = 1757 kerr = 0 758 kfax = 1 729 759 knfax = 0 730 760 ! 731 761 ! Find the factors of n. 732 762 IF( kn == 1 ) GOTO 20 … … 736 766 ! l points to the allowed factor list. 737 767 ! ifac holds the current factor. 738 768 ! 739 769 inu = kn 740 770 knfax = 0 741 771 ! 742 772 DO jl = ntest, 1, -1 743 773 ! … … 763 793 ! 764 794 END DO 765 795 ! 766 796 20 CONTINUE ! Label 20 is the exit point from the factor search loop. 767 797 ! … … 769 799 770 800 #if defined key_mpp_mpi 801 771 802 SUBROUTINE nemo_northcomms 772 !! ======================================================================803 !!---------------------------------------------------------------------- 773 804 !! *** ROUTINE nemo_northcomms *** 774 !! nemo_northcomms : Setup for north fold exchanges with explicit 775 !! point-to-point messaging 776 !!===================================================================== 777 !!---------------------------------------------------------------------- 778 !! 779 !! ** Purpose : Initialization of the northern neighbours lists. 805 !! ** Purpose : Setup for north fold exchanges with explicit 806 !! point-to-point messaging 807 !! 808 !! ** Method : Initialization of the northern neighbours lists. 780 809 !!---------------------------------------------------------------------- 781 810 !! 1.0 ! 2011-10 (A. C. Coward, NOCS & J. Donners, PRACE) 782 811 !! 2.0 ! 2013-06 Setup avoiding MPI communication (I. Epicoco, S. Mocavero, CMCC) 783 812 !!---------------------------------------------------------------------- 784 785 813 INTEGER :: sxM, dxM, sxT, dxT, jn 786 814 INTEGER :: njmppmax 787 815 !!---------------------------------------------------------------------- 816 ! 788 817 njmppmax = MAXVAL( njmppt ) 789 818 ! 790 819 !initializes the north-fold communication variables 791 820 isendto(:) = 0 792 nsndto = 0793 821 nsndto = 0 822 ! 794 823 !if I am a process in the north 795 824 IF ( njmpp == njmppmax ) THEN … … 838 867 l_north_nogather = .TRUE. 839 868 END SUBROUTINE nemo_northcomms 869 840 870 #else 841 871 SUBROUTINE nemo_northcomms ! Dummy routine … … 843 873 END SUBROUTINE nemo_northcomms 844 874 #endif 875 845 876 !!====================================================================== 846 877 END MODULE nemogcm 847 878 848
Note: See TracChangeset
for help on using the changeset viewer.
