Changeset 6225 for branches/2014/dev_r4704_NOC5_MPP_BDY_UPDATE/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zmicro.F90
- Timestamp:
- 2016-01-08T10:35:19+01:00 (8 years ago)
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- 1 edited
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branches/2014/dev_r4704_NOC5_MPP_BDY_UPDATE/NEMOGCM/NEMO/TOP_SRC/PISCES/P4Z/p4zmicro.F90
r4624 r6225 49 49 50 50 51 !!* Substitution52 # include "top_substitute.h90"53 51 !!---------------------------------------------------------------------- 54 52 !! NEMO/TOP 3.3 , NEMO Consortium (2010) … … 59 57 CONTAINS 60 58 61 SUBROUTINE p4z_micro( kt, jnt )59 SUBROUTINE p4z_micro( kt, knt ) 62 60 !!--------------------------------------------------------------------- 63 61 !! *** ROUTINE p4z_micro *** … … 68 66 !!--------------------------------------------------------------------- 69 67 INTEGER, INTENT(in) :: kt ! ocean time step 70 INTEGER, INTENT(in) :: jnt68 INTEGER, INTENT(in) :: knt 71 69 ! 72 70 INTEGER :: ji, jj, jk … … 79 77 REAL(wp) :: zgrazp, zgrazm, zgrazsd 80 78 REAL(wp) :: zgrazmf, zgrazsf, zgrazpf 81 REAL(wp) :: zrfact2 82 REAL(wp), POINTER, DIMENSION(:,:,:) :: zgrazing 79 REAL(wp), POINTER, DIMENSION(:,:,:) :: zgrazing, zw3d 83 80 CHARACTER (len=25) :: charout 84 81 !!--------------------------------------------------------------------- … … 86 83 IF( nn_timing == 1 ) CALL timing_start('p4z_micro') 87 84 ! 88 IF( l n_diatrc .AND. lk_iomput ) CALL wrk_alloc( jpi, jpj, jpk, zgrazing )85 IF( lk_iomput ) CALL wrk_alloc( jpi, jpj, jpk, zgrazing ) 89 86 ! 90 87 DO jk = 1, jpkm1 91 88 DO jj = 1, jpj 92 89 DO ji = 1, jpi 93 zcompaz = MAX( ( tr n(ji,jj,jk,jpzoo) - 1.e-9 ), 0.e0 )90 zcompaz = MAX( ( trb(ji,jj,jk,jpzoo) - 1.e-9 ), 0.e0 ) 94 91 zstep = xstep 95 92 # if defined key_degrad … … 100 97 ! Respiration rates of both zooplankton 101 98 ! ------------------------------------- 102 zrespz = resrat * zfact * tr n(ji,jj,jk,jpzoo) / ( xkmort + trn(ji,jj,jk,jpzoo) ) &99 zrespz = resrat * zfact * trb(ji,jj,jk,jpzoo) / ( xkmort + trb(ji,jj,jk,jpzoo) ) & 103 100 & + resrat * zfact * 3. * nitrfac(ji,jj,jk) 104 101 … … 106 103 ! no real reason except that it seems to be more stable and may mimic predation. 107 104 ! --------------------------------------------------------------- 108 ztortz = mzrat * 1.e6 * zfact * tr n(ji,jj,jk,jpzoo)109 110 zcompadi = MIN( MAX( ( tr n(ji,jj,jk,jpdia) - xthreshdia ), 0.e0 ), xsizedia )111 zcompaph = MAX( ( tr n(ji,jj,jk,jpphy) - xthreshphy ), 0.e0 )112 zcompapoc = MAX( ( tr n(ji,jj,jk,jppoc) - xthreshpoc ), 0.e0 )105 ztortz = mzrat * 1.e6 * zfact * trb(ji,jj,jk,jpzoo) 106 107 zcompadi = MIN( MAX( ( trb(ji,jj,jk,jpdia) - xthreshdia ), 0.e0 ), xsizedia ) 108 zcompaph = MAX( ( trb(ji,jj,jk,jpphy) - xthreshphy ), 0.e0 ) 109 zcompapoc = MAX( ( trb(ji,jj,jk,jppoc) - xthreshpoc ), 0.e0 ) 113 110 114 111 ! Microzooplankton grazing … … 118 115 zdenom = zfoodlim / ( xkgraz + zfoodlim ) 119 116 zdenom2 = zdenom / ( zfood + rtrn ) 120 zgraze = grazrat * zstep * tgfunc2(ji,jj,jk) * tr n(ji,jj,jk,jpzoo)117 zgraze = grazrat * zstep * tgfunc2(ji,jj,jk) * trb(ji,jj,jk,jpzoo) 121 118 122 119 zgrazp = zgraze * xpref2p * zcompaph * zdenom2 … … 124 121 zgrazsd = zgraze * xpref2d * zcompadi * zdenom2 125 122 126 zgrazpf = zgrazp * tr n(ji,jj,jk,jpnfe) / (trn(ji,jj,jk,jpphy) + rtrn)127 zgrazmf = zgrazm * tr n(ji,jj,jk,jpsfe) / (trn(ji,jj,jk,jppoc) + rtrn)128 zgrazsf = zgrazsd * tr n(ji,jj,jk,jpdfe) / (trn(ji,jj,jk,jpdia) + rtrn)123 zgrazpf = zgrazp * trb(ji,jj,jk,jpnfe) / (trb(ji,jj,jk,jpphy) + rtrn) 124 zgrazmf = zgrazm * trb(ji,jj,jk,jpsfe) / (trb(ji,jj,jk,jppoc) + rtrn) 125 zgrazsf = zgrazsd * trb(ji,jj,jk,jpdfe) / (trb(ji,jj,jk,jpdia) + rtrn) 129 126 ! 130 127 zgraztot = zgrazp + zgrazm + zgrazsd … … 137 134 ! Various remineralization and excretion terms 138 135 ! -------------------------------------------- 139 zgrasrat = zgraztotf/ ( zgraztot + rtrn )140 zgrasratn = zgraztotn/ ( zgraztot + rtrn )136 zgrasrat = ( zgraztotf + rtrn ) / ( zgraztot + rtrn ) 137 zgrasratn = ( zgraztotn + rtrn ) / ( zgraztot + rtrn ) 141 138 zepshert = MIN( 1., zgrasratn, zgrasrat / ferat3) 142 139 zepsherv = zepshert * MIN( epsher, (1. - unass) * zgrasrat / ferat3, (1. - unass) * zgrasratn ) … … 166 163 tra(ji,jj,jk,jpphy) = tra(ji,jj,jk,jpphy) - zgrazp 167 164 tra(ji,jj,jk,jpdia) = tra(ji,jj,jk,jpdia) - zgrazsd 168 tra(ji,jj,jk,jpnch) = tra(ji,jj,jk,jpnch) - zgrazp * tr n(ji,jj,jk,jpnch)/(trn(ji,jj,jk,jpphy)+rtrn)169 tra(ji,jj,jk,jpdch) = tra(ji,jj,jk,jpdch) - zgrazsd * tr n(ji,jj,jk,jpdch)/(trn(ji,jj,jk,jpdia)+rtrn)170 tra(ji,jj,jk,jpdsi) = tra(ji,jj,jk,jpdsi) - zgrazsd * tr n(ji,jj,jk,jpdsi)/(trn(ji,jj,jk,jpdia)+rtrn)171 tra(ji,jj,jk,jpgsi) = tra(ji,jj,jk,jpgsi) + zgrazsd * tr n(ji,jj,jk,jpdsi)/(trn(ji,jj,jk,jpdia)+rtrn)165 tra(ji,jj,jk,jpnch) = tra(ji,jj,jk,jpnch) - zgrazp * trb(ji,jj,jk,jpnch)/(trb(ji,jj,jk,jpphy)+rtrn) 166 tra(ji,jj,jk,jpdch) = tra(ji,jj,jk,jpdch) - zgrazsd * trb(ji,jj,jk,jpdch)/(trb(ji,jj,jk,jpdia)+rtrn) 167 tra(ji,jj,jk,jpdsi) = tra(ji,jj,jk,jpdsi) - zgrazsd * trb(ji,jj,jk,jpdsi)/(trb(ji,jj,jk,jpdia)+rtrn) 168 tra(ji,jj,jk,jpgsi) = tra(ji,jj,jk,jpgsi) + zgrazsd * trb(ji,jj,jk,jpdsi)/(trb(ji,jj,jk,jpdia)+rtrn) 172 169 tra(ji,jj,jk,jpnfe) = tra(ji,jj,jk,jpnfe) - zgrazpf 173 170 tra(ji,jj,jk,jpdfe) = tra(ji,jj,jk,jpdfe) - zgrazsf … … 185 182 #if defined key_kriest 186 183 tra(ji,jj,jk,jpnum) = tra(ji,jj,jk,jpnum) + zmortz * xkr_dmicro & 187 - zgrazm * tr n(ji,jj,jk,jpnum) / ( trn(ji,jj,jk,jppoc) + rtrn )184 - zgrazm * trb(ji,jj,jk,jpnum) / ( trb(ji,jj,jk,jppoc) + rtrn ) 188 185 #endif 189 186 END DO … … 191 188 END DO 192 189 ! 193 IF( ln_diatrc .AND. lk_iomput .AND. jnt == nrdttrc ) THEN 194 zrfact2 = 1.e3 * rfact2r 195 CALL iom_put( "GRAZ1" , zgrazing(:,:,:) * zrfact2 * tmask(:,:,:) ) ! Total grazing of phyto by zooplankton 190 IF( lk_iomput .AND. knt == nrdttrc ) THEN 191 CALL wrk_alloc( jpi, jpj, jpk, zw3d ) 192 IF( iom_use( "GRAZ1" ) ) THEN 193 zw3d(:,:,:) = zgrazing(:,:,:) * 1.e+3 * rfact2r * tmask(:,:,:) ! Total grazing of phyto by zooplankton 194 CALL iom_put( "GRAZ1", zw3d ) 195 ENDIF 196 CALL wrk_dealloc( jpi, jpj, jpk, zw3d ) 196 197 ENDIF 197 198 ! … … 202 203 ENDIF 203 204 ! 204 IF( l n_diatrc .AND. lk_iomput ) CALL wrk_dealloc( jpi, jpj, jpk, zgrazing )205 IF( lk_iomput ) CALL wrk_dealloc( jpi, jpj, jpk, zgrazing ) 205 206 ! 206 207 IF( nn_timing == 1 ) CALL timing_stop('p4z_micro') … … 270 271 271 272 !!====================================================================== 272 END MODULE 273 END MODULE p4zmicro
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