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Changeset 6275 for branches/2015/nemo_v3_6_STABLE/DOC/TexFiles/Chapters/Chap_DOM.tex – NEMO

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Timestamp:
2016-02-01T03:35:04+01:00 (8 years ago)
Author:
gm
Message:

#1629: DOC of v3.6_stable. Upadate, see associated wiki page for description

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1 edited

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  • branches/2015/nemo_v3_6_STABLE/DOC/TexFiles/Chapters/Chap_DOM.tex

    r5120 r6275  
    11% ================================================================ 
    2 % Chapter 2 Space and Time Domain (DOM) 
     2% Chapter 2 ——— Space and Time Domain (DOM) 
    33% ================================================================ 
    44\chapter{Space Domain (DOM) } 
     
    138138and $f$-points, and its divergence defined at $t$-points: 
    139139\begin{eqnarray}  \label{Eq_DOM_curl} 
    140  \nabla \times {\rm {\bf A}}\equiv & 
     140 \nabla \times {\rm{\bf A}}\equiv & 
    141141      \frac{1}{e_{2v}\,e_{3vw} } \ \left( \delta_{j +1/2} \left[e_{3w}\,a_3 \right] -\delta_{k+1/2} \left[e_{2v} \,a_2 \right] \right)  &\ \mathbf{i} \\  
    142142 +& \frac{1}{e_{2u}\,e_{3uw}} \ \left( \delta_{k+1/2} \left[e_{1u}\,a_1  \right] -\delta_{i +1/2} \left[e_{3w}\,a_3 \right] \right)  &\ \mathbf{j} \\ 
     
    183183Let $a$ and $b$ be two fields defined on the mesh, with value zero inside  
    184184continental area. Using integration by parts it can be shown that the differencing  
    185 operators ($\delta_i$, $\delta_j$ and $\delta_k$) are anti-symmetric linear  
    186 operators, and further that the averaging operators $\overline{\,\cdot\,}^{\,i}$,  
     185operators ($\delta_i$, $\delta_j$ and $\delta_k$) are skew-symmetric linear operators,  
     186and further that the averaging operators $\overline{\,\cdot\,}^{\,i}$,  
    187187$\overline{\,\cdot\,}^{\,k}$ and $\overline{\,\cdot\,}^{\,k}$) are symmetric linear  
    188188operators, $i.e.$ 
     
    364364For both grids here,  the same $w$-point depth has been chosen but in (a) the  
    365365$t$-points are set half way between $w$-points while in (b) they are defined from  
    366 an analytical function: $z(k)=5\,(i-1/2)^3 - 45\,(i-1/2)^2 + 140\,(i-1/2) - 150$.  
     366an analytical function: $z(k)=5\,(k-1/2)^3 - 45\,(k-1/2)^2 + 140\,(k-1/2) - 150$.  
    367367Note the resulting difference between the value of the grid-size $\Delta_k$ and  
    368368those of the scale factor $e_k$. } 
     
    425425 
    426426The choice of the grid must be consistent with the boundary conditions specified  
    427 by the parameter \np{jperio} (see {\S\ref{LBC}). 
     427by \np{jperio}, a parameter found in \ngn{namcfg} namelist (see {\S\ref{LBC}). 
    428428 
    429429% ------------------------------------------------------------------------------------------------------------- 
     
    481481%>>>>>>>>>>>>>>>>>>>>>>>>>>>> 
    482482 
    483 The choice of a vertical coordinate, even if it is made through a namelist parameter,  
     483The choice of a vertical coordinate, even if it is made through \ngn{namzgr} namelist parameters,  
    484484must be done once of all at the beginning of an experiment. It is not intended as an  
    485485option which can be enabled or disabled in the middle of an experiment. Three main  
     
    498498Contrary to the horizontal grid, the vertical grid is computed in the code and no  
    499499provision is made for reading it from a file. The only input file is the bathymetry  
    500 (in meters) (\ifile{bathy\_meter})  
     500(in meters) (\ifile{bathy\_meter}).  
    501501\footnote{N.B. in full step $z$-coordinate, a \ifile{bathy\_level} file can replace the  
    502502\ifile{bathy\_meter} file, so that the computation of the number of wet ocean point  
     
    540540 
    541541Three options are possible for defining the bathymetry, according to the  
    542 namelist variable \np{nn\_bathy}:  
     542namelist variable \np{nn\_bathy} (found in \ngn{namdom} namelist):  
    543543\begin{description} 
    544544\item[\np{nn\_bathy} = 0] a flat-bottom domain is defined. The total depth $z_w (jpk)$  
     
    721721usually 10\%, of the default thickness $e_{3t}(jk)$). 
    722722 
    723  \colorbox{yellow}{Add a figure here of pstep especially at last ocean level } 
     723\gmcomment{ \colorbox{yellow}{Add a figure here of pstep especially at last ocean level } } 
    724724 
    725725% ------------------------------------------------------------------------------------------------------------- 
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