- Timestamp:
- 2016-04-07T15:33:32+02:00 (8 years ago)
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branches/UKMO/nemo_v3_6_STABLE_copy/NEMOGCM/TOOLS/SIREN/src/create_restart.f90
r5783 r6436 9 9 !> @file 10 10 !> @brief 11 !> This program create restart file.11 !> This program creates restart file. 12 12 !> 13 13 !> @details 14 14 !> @section sec1 method 15 15 !> Variables could be extracted from fine grid file, interpolated from coarse 16 !> grid file or restart file , ormanually written.<br/>17 !> Then they are split over new decomposition.16 !> grid file or restart file. Variables could also be manually written.<br/> 17 !> Then they are split over new layout. 18 18 !> @note 19 19 !> method could be different for each variable. … … 28 28 !> you could find a template of the namelist in templates directory. 29 29 !> 30 !> create_restart.nam co mprise9 namelists:<br/>30 !> create_restart.nam contains 9 namelists:<br/> 31 31 !> - logger namelist (namlog) 32 32 !> - config namelist (namcfg) … … 39 39 !> - output namelist (namout) 40 40 !> 41 !> @note42 !> All namelists have to be in file create_restart.nam43 !> however variables of those namelists are all optional.44 !>45 41 !> * _logger namelist (namlog)_:<br/> 46 42 !> - cn_logfile : log filename … … 52 48 !> - cn_varcfg : variable configuration file 53 49 !> (see ./SIREN/cfg/variable.cfg) 50 !> - cn_dumcfg : useless (dummy) configuration file, for useless 51 !> dimension or variable (see ./SIREN/cfg/dummy.cfg). 54 52 !> 55 53 !> * _coarse grid namelist (namcrs):<br/> … … 82 80 !> 83 81 !> * _variable namelist (namvar)_:<br/> 84 !> - cn_varinfo : list of variable and extra information about request(s) 85 !> to be used.<br/> 86 !> each elements of *cn_varinfo* is a string character 87 !> (separated by ',').<br/> 88 !> it is composed of the variable name follow by ':', 89 !> then request(s) to be used on this variable.<br/> 90 !> request could be: 91 !> - int = interpolation method 92 !> - ext = extrapolation method 93 !> - flt = filter method 94 !> - min = minimum value 95 !> - max = maximum value 96 !> - unt = new units 97 !> - unf = unit scale factor (linked to new units) 98 !> 99 !> requests must be separated by ';'.<br/> 100 !> order of requests does not matter.<br/> 101 !> 102 !> informations about available method could be find in @ref interp, 103 !> @ref extrap and @ref filter.<br/> 104 !> Example: 'votemper: int=linear; flt=hann; ext=dist_weight','vosaline: int=cubic' 105 !> @note 106 !> If you do not specify a method which is required, 107 !> default one is apply. 108 !> - cn_varfile : list of variable, and corresponding file<br/> 82 !> - cn_varfile : list of variable, and associated file<br/> 109 83 !> *cn_varfile* is the path and filename of the file where find 110 84 !> variable.<br/> … … 131 105 !> - 'all:restart.dimg' 132 106 !> 107 !> - cn_varinfo : list of variable and extra information about request(s) 108 !> to be used.<br/> 109 !> each elements of *cn_varinfo* is a string character 110 !> (separated by ',').<br/> 111 !> it is composed of the variable name follow by ':', 112 !> then request(s) to be used on this variable.<br/> 113 !> request could be: 114 !> - int = interpolation method 115 !> - ext = extrapolation method 116 !> - flt = filter method 117 !> - min = minimum value 118 !> - max = maximum value 119 !> - unt = new units 120 !> - unf = unit scale factor (linked to new units) 121 !> 122 !> requests must be separated by ';'.<br/> 123 !> order of requests does not matter.<br/> 124 !> 125 !> informations about available method could be find in @ref interp, 126 !> @ref extrap and @ref filter.<br/> 127 !> Example: 'votemper: int=linear; flt=hann; ext=dist_weight', 128 !> 'vosaline: int=cubic' 129 !> @note 130 !> If you do not specify a method which is required, 131 !> default one is apply. 132 !> 133 133 !> * _nesting namelist (namnst)_:<br/> 134 134 !> - in_rhoi : refinement factor in i-direction 135 135 !> - in_rhoj : refinement factor in j-direction 136 136 !> @note 137 !> coarse grid indices will be deduced from fine grid137 !> coarse grid indices will be computed from fine grid 138 138 !> coordinate file. 139 139 !> … … 141 141 !> - cn_fileout : output file 142 142 !> - ln_extrap : extrapolate land point or not 143 !> - in_niproc : i-direction number of processor144 !> - in_njproc : j-direction numebr of processor143 !> - in_niproc : number of processor in i-direction 144 !> - in_njproc : number of processor in j-direction 145 145 !> - in_nproc : total number of processor to be used 146 146 !> - cn_type : output format ('dimg', 'cdf') … … 156 156 !> - extrapolate all land points, and add ln_extrap in namelist. 157 157 !> - allow to change unit. 158 !> @date September, 2015 159 !> - manage useless (dummy) variable, attributes, and dimension 158 160 !> 159 161 !> @note Software governed by the CeCILL licence (NEMOGCM/NEMO_CeCILL.txt) … … 173 175 USE iom ! I/O manager 174 176 USE grid ! grid manager 175 USE vgrid 177 USE vgrid ! vertical grid manager 176 178 USE extrap ! extrapolation manager 177 179 USE interp ! interpolation manager … … 183 185 184 186 IMPLICIT NONE 185 186 187 187 188 ! local variable … … 212 213 213 214 LOGICAL :: ll_exist 215 LOGICAL :: ll_sameGrid 214 216 215 217 TYPE(TDOM) :: tl_dom1 … … 242 244 ! namelist variable 243 245 ! namlog 244 CHARACTER(LEN=lc) :: cn_logfile = 'create_restart.log'245 CHARACTER(LEN=lc) :: cn_verbosity = 'warning'246 INTEGER(i4) :: in_maxerror = 5246 CHARACTER(LEN=lc) :: cn_logfile = 'create_restart.log' 247 CHARACTER(LEN=lc) :: cn_verbosity = 'warning' 248 INTEGER(i4) :: in_maxerror = 5 247 249 248 250 ! namcfg 249 CHARACTER(LEN=lc) :: cn_varcfg = 'variable.cfg' 251 CHARACTER(LEN=lc) :: cn_varcfg = 'variable.cfg' 252 CHARACTER(LEN=lc) :: cn_dumcfg = 'dummy.cfg' 250 253 251 254 ! namcrs 252 CHARACTER(LEN=lc) :: cn_coord0 = ''253 INTEGER(i4) :: in_perio0 = -1255 CHARACTER(LEN=lc) :: cn_coord0 = '' 256 INTEGER(i4) :: in_perio0 = -1 254 257 255 258 ! namfin 256 CHARACTER(LEN=lc) :: cn_coord1 = ''257 CHARACTER(LEN=lc) :: cn_bathy1 = ''258 INTEGER(i4) :: in_perio1 = -1259 CHARACTER(LEN=lc) :: cn_coord1 = '' 260 CHARACTER(LEN=lc) :: cn_bathy1 = '' 261 INTEGER(i4) :: in_perio1 = -1 259 262 260 263 !namzgr 261 REAL(dp) :: dn_pp_to_be_computed = 0._dp262 REAL(dp) :: dn_ppsur= -3958.951371276829_dp263 REAL(dp) :: dn_ppa0 = 103.9530096000000_dp264 REAL(dp) :: dn_ppa1 = 2.4159512690000_dp265 REAL(dp) :: dn_ppa2 = 100.7609285000000_dp266 REAL(dp) :: dn_ppkth = 15.3510137000000_dp267 REAL(dp) :: dn_ppkth2 = 48.0298937200000_dp268 REAL(dp) :: dn_ppacr = 7.0000000000000_dp269 REAL(dp) :: dn_ppacr2= 13.000000000000_dp270 REAL(dp) :: dn_ppdzmin= 6._dp271 REAL(dp) :: dn_pphmax= 5750._dp272 INTEGER(i4) :: in_nlevel= 75264 REAL(dp) :: dn_pp_to_be_computed = 0._dp 265 REAL(dp) :: dn_ppsur = -3958.951371276829_dp 266 REAL(dp) :: dn_ppa0 = 103.953009600000_dp 267 REAL(dp) :: dn_ppa1 = 2.415951269000_dp 268 REAL(dp) :: dn_ppa2 = 100.760928500000_dp 269 REAL(dp) :: dn_ppkth = 15.351013700000_dp 270 REAL(dp) :: dn_ppkth2 = 48.029893720000_dp 271 REAL(dp) :: dn_ppacr = 7.000000000000_dp 272 REAL(dp) :: dn_ppacr2 = 13.000000000000_dp 273 REAL(dp) :: dn_ppdzmin = 6._dp 274 REAL(dp) :: dn_pphmax = 5750._dp 275 INTEGER(i4) :: in_nlevel = 75 273 276 274 277 !namzps 275 REAL(dp) :: dn_e3zps_min = 25._dp276 REAL(dp) :: dn_e3zps_rat = 0.2_dp278 REAL(dp) :: dn_e3zps_min = 25._dp 279 REAL(dp) :: dn_e3zps_rat = 0.2_dp 277 280 278 281 ! namvar 282 CHARACTER(LEN=lc), DIMENSION(ip_maxvar) :: cn_varfile = '' 279 283 CHARACTER(LEN=lc), DIMENSION(ip_maxvar) :: cn_varinfo = '' 280 CHARACTER(LEN=lc), DIMENSION(ip_maxvar) :: cn_varfile = ''281 284 282 285 ! namnst 283 INTEGER(i4) :: in_rhoi = 0284 INTEGER(i4) :: in_rhoj = 0286 INTEGER(i4) :: in_rhoi = 0 287 INTEGER(i4) :: in_rhoj = 0 285 288 286 289 ! namout 287 CHARACTER(LEN=lc) :: cn_fileout = 'restart.nc'288 LOGICAL :: ln_extrap = .FALSE.289 INTEGER(i4) :: in_nproc = 0290 INTEGER(i4) :: in_niproc = 0291 INTEGER(i4) :: in_njproc = 0292 CHARACTER(LEN=lc) :: cn_type = ''290 CHARACTER(LEN=lc) :: cn_fileout = 'restart.nc' 291 LOGICAL :: ln_extrap = .FALSE. 292 INTEGER(i4) :: in_nproc = 0 293 INTEGER(i4) :: in_niproc = 0 294 INTEGER(i4) :: in_njproc = 0 295 CHARACTER(LEN=lc) :: cn_type = '' 293 296 294 297 !------------------------------------------------------------------- … … 300 303 301 304 NAMELIST /namcfg/ & !< configuration namelist 302 & cn_varcfg !< variable configuration file 305 & cn_varcfg, & !< variable configuration file 306 & cn_dumcfg !< dummy configuration file 303 307 304 308 NAMELIST /namcrs/ & !< coarse grid namelist … … 330 334 331 335 NAMELIST /namvar/ & !< variable namelist 332 & cn_var info, & !< list of variable and interpolation method to be used.333 & cn_var file !< list of variable file336 & cn_varfile, & !< list of variable file 337 & cn_varinfo !< list of variable and interpolation method to be used. 334 338 335 339 NAMELIST /namnst/ & !< nesting namelist … … 382 386 ! get variable extra information 383 387 CALL var_def_extra(TRIM(cn_varcfg)) 388 389 ! get dummy variable 390 CALL var_get_dummy(TRIM(cn_dumcfg)) 391 ! get dummy dimension 392 CALL dim_get_dummy(TRIM(cn_dumcfg)) 393 ! get dummy attribute 394 CALL att_get_dummy(TRIM(cn_dumcfg)) 384 395 385 396 READ( il_fileid, NML = namcrs ) … … 509 520 510 521 jvar=jvar+1 511 522 512 523 WRITE(*,'(2x,a,a)') "work on variable "//& 513 524 & TRIM(tl_multi%t_mpp(ji)%t_proc(1)%t_var(jj)%c_name) … … 541 552 CALL iom_mpp_open(tl_mpp) 542 553 543 544 554 ! get or check depth value 545 555 CALL create_restart_check_depth( tl_mpp, tl_depth ) … … 551 561 CALL iom_mpp_close(tl_mpp) 552 562 553 IF( ANY( tl_mpp%t_dim(1:2)%i_len /=&554 & tl_coord0%t_dim(1:2)%i_len) )THEN563 IF( ANY(tl_mpp%t_dim(1:2)%i_len /= tl_coord0%t_dim(1:2)%i_len) .OR.& 564 & ALL(il_rho(:)==1) )THEN 555 565 !!! extract value from fine grid 556 566 557 IF( ANY( tl_mpp%t_dim(1:2)%i_len < =&567 IF( ANY( tl_mpp%t_dim(1:2)%i_len < & 558 568 & tl_coord1%t_dim(1:2)%i_len) )THEN 559 CALL logger_fatal("CREATE RESTART: dimension in file "//&569 CALL logger_fatal("CREATE RESTART: dimensions in file "//& 560 570 & TRIM(tl_mpp%c_name)//" smaller than those in fine"//& 561 571 & " grid coordinates.") 562 572 ENDIF 563 573 574 ! use coord0 instead of mpp for restart file case 575 ! (without lon,lat) 576 ll_sameGrid=.FALSE. 577 IF( ALL(tl_mpp%t_dim(1:2)%i_len /= tl_coord0%t_dim(1:2)%i_len) & 578 & )THEN 579 ll_sameGrid=.TRUE. 580 ENDIF 581 564 582 ! compute domain on fine grid 565 il_ind(:,:)=grid_get_coarse_index(tl_mpp, tl_coord1 ) 583 IF( ll_sameGrid )THEN 584 il_ind(:,:)=grid_get_coarse_index(tl_mpp, tl_coord1 ) 585 ELSE 586 il_ind(:,:)=grid_get_coarse_index(tl_coord0, tl_coord1 ) 587 ENDIF 566 588 567 589 il_imin1=il_ind(1,1) ; il_imax1=il_ind(1,2) … … 569 591 570 592 !- check grid coincidence 571 CALL grid_check_coincidence( tl_mpp, tl_coord1, & 572 & il_imin1, il_imax1, & 573 & il_jmin1, il_jmax1, & 574 & il_rho(:) ) 593 IF( ll_sameGrid )THEN 594 CALL grid_check_coincidence( tl_mpp, tl_coord1, & 595 & il_imin1, il_imax1, & 596 & il_jmin1, il_jmax1, & 597 & il_rho(:) ) 598 ELSE 599 CALL grid_check_coincidence( tl_coord0, tl_coord1, & 600 & il_imin1, il_imax1, & 601 & il_jmin1, il_jmax1, & 602 & il_rho(:) ) 603 ENDIF 575 604 576 605 ! compute domain … … 754 783 755 784 DO ji=1,ip_maxdim 785 756 786 IF( tl_dim(ji)%l_use )THEN 757 787 CALL mpp_move_dim(tl_mppout, tl_dim(ji)) … … 763 793 END SELECT 764 794 ENDIF 795 765 796 ENDDO 766 797 … … 879 910 !> and with dimension of the coordinate file.<br/> 880 911 !> Then the variable array of value is split into equal subdomain. 881 !> Each subdomain is filled with the correspondingvalue of the matrix.912 !> Each subdomain is filled with the associated value of the matrix. 882 913 !> 883 914 !> @author J.Paul … … 1169 1200 & tl_depth%d_value(:,:,:,:) ) )THEN 1170 1201 1171 CALL logger_ fatal("CREATE BOUNDARY: depth value from "//&1172 & TRIM(t l_multi%t_mpp(ji)%c_name)//" not conform "//&1202 CALL logger_warn("CREATE BOUNDARY: depth value from "//& 1203 & TRIM(td_mpp%c_name)//" not conform "//& 1173 1204 & " to those from former file(s).") 1174 1205 … … 1226 1257 IF( tl_date1 - tl_date2 /= 0 )THEN 1227 1258 1228 CALL logger_ fatal("CREATE BOUNDARY: date from "//&1229 & TRIM(t l_multi%t_mpp(ji)%c_name)//" not conform "//&1259 CALL logger_warn("CREATE BOUNDARY: date from "//& 1260 & TRIM(td_mpp%c_name)//" not conform "//& 1230 1261 & " to those from former file(s).") 1231 1262
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