Changeset 7162 for branches/2016/dev_r7012_ROBUST5_CNRS/NEMOGCM/NEMO/TOP_SRC/PISCES/trcini_pisces.F90

Timestamp:

2016-11-01T14:23:51+01:00 (8 years ago)

Author:

cetlod

Message:

new top interface : Add PISCES quota model

File:

• branches/2016/dev_r7012_ROBUST5_CNRS/NEMOGCM/NEMO/TOP_SRC/PISCES/trcini_pisces.F90 (modified) (8 diffs)

branches/2016/dev_r7012_ROBUST5_CNRS/NEMOGCM/NEMO/TOP_SRC/PISCES/trcini_pisces.F90

@@ -38 +38 @@
       !!----------------------------------------------------------------------
 
-      IF( ln_p4z ) THEN  ;   CALL p4z_ini   !  PISCES
-      ELSE               ;   CALL p2z_ini   !  LOBSTER
+      !
+      CALL trc_nam_pisces
+      !
+      IF( ln_p4z .OR. ln_p5z ) THEN  ;   CALL p4z_ini   !  PISCES
+      ELSE                           ;   CALL p2z_ini   !  LOBSTER
       ENDIF
 
@@ -66 +69 @@
       USE p4zlys          !  Calcite saturation
       USE p4zsed          !  Sedimentation & burial
+      USE p4zpoc          !  Remineralization of organic particles
+      USE p4zligand       !  Remineralization of organic ligands
+      USE p5zlim          !  Co-limitations of differents nutrients
+      USE p5zprod         !  Growth rate of the 2 phyto groups
+      USE p5zmicro        !  Sources and sinks of microzooplankton
+      USE p5zmeso         !  Sources and sinks of mesozooplankton
+      USE p5zmort         !  Mortality terms for phytoplankton
+
       !
       REAL(wp), SAVE :: sco2   =  2.312e-3_wp
@@ -82 +93 @@
       !!----------------------------------------------------------------------
 
-      IF(lwp) WRITE(numout,*)
-      IF(lwp) WRITE(numout,*) ' p4z_ini :   PISCES biochemical model initialisation'
-      IF(lwp) WRITE(numout,*) ' ~~~~~~~~~~~~~~'
-      !
-      CALL trc_nam_pisces
+      IF(lwp) THEN
+         WRITE(numout,*)
+         IF( ln_p4z ) THEN 
+            WRITE(numout,*) ' p4z_ini :   PISCES biochemical model initialisation'
+         ELSE
+            WRITE(numout,*) ' p5z_ini :   PISCES biochemical model initialisation'
+            WRITE(numout,*) '             With variable stoichiometry'
+         ENDIF
+         WRITE(numout,*) ' ~~~~~~~~~~~~~~'
+      ENDIF
       !
       ! Allocate PISCES arrays
@@ -93 +109 @@
       ierr = ierr +  p4z_sink_alloc()
       ierr = ierr +  p4z_opt_alloc()
-      ierr = ierr +  p4z_prod_alloc()
-      ierr = ierr +  p4z_rem_alloc()
       ierr = ierr +  p4z_flx_alloc()
       ierr = ierr +  p4z_sed_alloc()
+      ierr = ierr +  p4z_rem_alloc()
+      IF( ln_p4z ) THEN
+         ierr = ierr +  p4z_lim_alloc()
+         ierr = ierr +  p4z_prod_alloc()
+      ELSE
+         ierr = ierr +  p5z_lim_alloc()
+         ierr = ierr +  p5z_prod_alloc()
+      ENDIF
       !
       IF( lk_mpp    )   CALL mpp_sum( ierr )
@@ -132 +154 @@
         IF( cltra == 'NO3'      )   jpno3 = jn      !: Nitrates Concentration
         IF( cltra == 'NH4'      )   jpnh4 = jn      !: Ammonium Concentration
+        IF( cltra == 'DON'      )   jpdon = jn      !: Dissolved organic N Concentration
+        IF( cltra == 'DOP'      )   jpdop = jn      !: Dissolved organic P Concentration
+        IF( cltra == 'PON'      )   jppon = jn      !: Small Nitrogen particle Concentration
+        IF( cltra == 'POP'      )   jppop = jn      !: Small Phosphorus particle Concentration
+        IF( cltra == 'GON'      )   jpgon = jn      !: Big Nitrogen particles Concentration
+        IF( cltra == 'GOP'      )   jpgop = jn      !: Big Phosphorus Concentration
+        IF( cltra == 'PHYN'     )   jpnph = jn      !: Nanophytoplankton N biomass
+        IF( cltra == 'PHYP'     )   jppph = jn      !: Nanophytoplankton P biomass
+        IF( cltra == 'DIAN'     )   jpndi = jn      !: Diatoms N biomass
+        IF( cltra == 'DIAP'     )   jppdi = jn      !: Diatoms P biomass
+        IF( cltra == 'PIC'      )   jppic = jn      !: Picophytoplankton C biomass
+        IF( cltra == 'PICN'     )   jpnpi = jn      !: Picophytoplankton N biomass
+        IF( cltra == 'PICP'     )   jpppi = jn      !: Picophytoplankton P biomass
+        IF( cltra == 'PFe'      )   jppfe = jn      !: Picophytoplankton Fe biomass
+        IF( cltra == 'LFe'      )   jplgw = jn      !: Weak ligands
+        IF( cltra == 'FFe'      )   jpfep = jn      !: Fe nanoparticle
       ENDDO
 
@@ -145 +183 @@
       rdenit  =  ( ( o2ut + o2nit ) * 0.80 - rno3 - rno3 * 0.60 ) / rno3
       rdenita =   3._wp /  5._wp
-
+      IF( ln_p5z ) THEN
+         no3rat3 = no3rat3 / rno3
+         po4rat3 = po4rat3 / po4r
+      ENDIF
 
       ! Initialization of tracer concentration in case of  no restart 
@@ -174 +215 @@
          trn(:,:,:,jpno3) = no3
          trn(:,:,:,jpnh4) = bioma0
-
+         IF( ln_ligand) THEN
+            trn(:,:,:,jplgw) = 0.6E-9
+            trn(:,:,:,jpfep) = 0. * 5.e-6
+         ENDIF
+         IF( ln_p5z ) THEN
+            trn(:,:,:,jpdon) = bioma0
+            trn(:,:,:,jpdop) = bioma0
+            trn(:,:,:,jppon) = bioma0
+            trn(:,:,:,jppop) = bioma0
+            trn(:,:,:,jpgon) = bioma0
+            trn(:,:,:,jpgop) = bioma0
+            trn(:,:,:,jpnph) = bioma0
+            trn(:,:,:,jppph) = bioma0
+            trn(:,:,:,jppic) = bioma0
+            trn(:,:,:,jpnpi) = bioma0
+            trn(:,:,:,jpppi) = bioma0
+            trn(:,:,:,jpndi) = bioma0
+            trn(:,:,:,jppdi) = bioma0
+            trn(:,:,:,jppfe) = bioma0 * 5.e-6
+            trn(:,:,:,jppch) = bioma0 * 12. / 55.
+         ENDIF
          ! initialize the half saturation constant for silicate
          ! ----------------------------------------------------
@@ -182 +243 @@
 
 
-      CALL p4z_sink_init      !  vertical flux of particulate organic matter
-      CALL p4z_opt_init       !  Optic: PAR in the water column
-      CALL p4z_lim_init       !  co-limitations by the various nutrients
-      CALL p4z_prod_init      !  phytoplankton growth rate over the global ocean.
-      CALL p4z_sbc_init       !  boundary conditions
-      CALL p4z_fechem_init    !  Iron chemistry
-      CALL p4z_rem_init       !  remineralisation
-      CALL p4z_mort_init      !  phytoplankton mortality 
-      CALL p4z_micro_init     !  microzooplankton
-      CALL p4z_meso_init      !  mesozooplankton
-      CALL p4z_lys_init       !  calcite saturation
-      CALL p4z_flx_init       !  gas exchange 
+      CALL p4z_sink_init         !  vertical flux of particulate organic matter
+      CALL p4z_opt_init          !  Optic: PAR in the water column
+      IF( ln_p4z ) THEN
+         CALL p4z_lim_init       !  co-limitations by the various nutrients
+         CALL p4z_prod_init      !  phytoplankton growth rate over the global ocean.
+      ELSE
+         CALL p5z_lim_init       !  co-limitations by the various nutrients
+         CALL p5z_prod_init      !  phytoplankton growth rate over the global ocean.
+      ENDIF
+      CALL p4z_sbc_init          !  boundary conditions
+      CALL p4z_fechem_init       !  Iron chemistry
+      CALL p4z_rem_init          !  remineralisation
+      CALL p4z_poc_init          !  remineralisation of organic particles
+      IF( ln_ligand ) &
+         & CALL p4z_ligand_init  !  remineralisation of organic ligands
+
+      IF( ln_p4z ) THEN
+         CALL p4z_mort_init      !  phytoplankton mortality 
+         CALL p4z_micro_init     !  microzooplankton
+         CALL p4z_meso_init      !  mesozooplankton
+      ELSE
+         CALL p5z_mort_init      !  phytoplankton mortality 
+         CALL p5z_micro_init     !  microzooplankton
+         CALL p5z_meso_init      !  mesozooplankton
+      ENDIF
+      CALL p4z_lys_init          !  calcite saturation
+      IF( .NOT.l_co2cpl ) &
+        & CALL p4z_flx_init      !  gas exchange 
 
       ndayflxtr = 0