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Changeset 9363 for branches/2017/dev_merge_2017/DOC/TexFiles/Chapters/Chap_ZDF.tex – NEMO

Ignore:
Timestamp:
2018-02-28T10:29:22+01:00 (6 years ago)
Author:
nicolasmartin
Message:

Working with htlatex (LaTeX to HTML): disable floatrow package globally, fix several issues by adding \protect to all "fragile" commands (\mdl, \np, \key and \ngn) inside floats (caption or table). Still few specific issues inside Annnex_ISO

File:
1 edited

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  • branches/2017/dev_merge_2017/DOC/TexFiles/Chapters/Chap_ZDF.tex

    r9350 r9363  
    4949%        Constant  
    5050% ------------------------------------------------------------------------------------------------------------- 
    51 \subsection{Constant (\key{zdfcst})} 
     51\subsection{Constant (\protect\key{zdfcst})} 
    5252\label{ZDF_cst} 
    5353%--------------------------------------------namzdf--------------------------------------------------------- 
    … …  
    7474%        Richardson Number Dependent 
    7575% ------------------------------------------------------------------------------------------------------------- 
    76 \subsection{Richardson Number Dependent (\key{zdfric})} 
     76\subsection{Richardson Number Dependent (\protect\key{zdfric})} 
    7777\label{ZDF_ric} 
    7878 
    … …  
    132132%        TKE Turbulent Closure Scheme  
    133133% ------------------------------------------------------------------------------------------------------------- 
    134 \subsection{TKE Turbulent Closure Scheme (\key{zdftke})} 
     134\subsection{TKE Turbulent Closure Scheme (\protect\key{zdftke})} 
    135135\label{ZDF_tke} 
    136136 
    … …  
    237237\begin{figure}[!t] \begin{center} 
    238238\includegraphics[width=1.00\textwidth]{Fig_mixing_length} 
    239 \caption{ \label{Fig_mixing_length}  
     239\caption{ \protect\label{Fig_mixing_length}  
    240240Illustration of the mixing length computation. } 
    241241\end{center}   
    … …  
    405405%        TKE discretization considerations 
    406406% ------------------------------------------------------------------------------------------------------------- 
    407 \subsection{TKE discretization considerations (\key{zdftke})} 
     407\subsection{TKE discretization considerations (\protect\key{zdftke})} 
    408408\label{ZDF_tke_ene} 
    409409 
    … …  
    411411\begin{figure}[!t]   \begin{center} 
    412412\includegraphics[width=1.00\textwidth]{Fig_ZDF_TKE_time_scheme} 
    413 \caption{ \label{Fig_TKE_time_scheme}  
     413\caption{ \protect\label{Fig_TKE_time_scheme}  
    414414Illustration of the TKE time integration and its links to the momentum and tracer time integration. } 
    415415\end{center}   
    … …  
    508508%        GLS Generic Length Scale Scheme  
    509509% ------------------------------------------------------------------------------------------------------------- 
    510 \subsection{GLS Generic Length Scale (\key{zdfgls})} 
     510\subsection{GLS Generic Length Scale (\protect\key{zdfgls})} 
    511511\label{ZDF_gls} 
    512512 
    … …  
    579579\hline 
    580580\end{tabular} 
    581 \caption{   \label{Tab_GLS}  
     581\caption{   \protect\label{Tab_GLS}  
    582582Set of predefined GLS parameters, or equivalently predefined turbulence models available  
    583 with \key{zdfgls} and controlled by the \np{nn\_clos} namelist variable in \ngn{namzdf\_gls} .} 
     583with \protect\key{zdfgls} and controlled by the \protect\np{nn\_clos} namelist variable in \protect\ngn{namzdf\_gls} .} 
    584584\end{center}   \end{table} 
    585585%-------------------------------------------------------------------------------------------------------------- 
    … …  
    615615%        OSM OSMOSIS BL Scheme  
    616616% ------------------------------------------------------------------------------------------------------------- 
    617 \subsection{OSM OSMOSIS Boundary Layer scheme (\key{zdfosm})} 
     617\subsection{OSM OSMOSIS Boundary Layer scheme (\protect\key{zdfosm})} 
    618618\label{ZDF_osm} 
    619619 
    … …  
    646646%       Non-Penetrative Convective Adjustment  
    647647% ------------------------------------------------------------------------------------------------------------- 
    648 \subsection   [Non-Penetrative Convective Adjustment (\np{ln\_tranpc}) ] 
    649          {Non-Penetrative Convective Adjustment (\np{ln\_tranpc}=.true.) } 
     648\subsection   [Non-Penetrative Convective Adjustment (\protect\np{ln\_tranpc}) ] 
     649         {Non-Penetrative Convective Adjustment (\protect\np{ln\_tranpc}=.true.) } 
    650650\label{ZDF_npc} 
    651651 
    … …  
    657657\begin{figure}[!htb]    \begin{center} 
    658658\includegraphics[width=0.90\textwidth]{Fig_npc} 
    659 \caption{  \label{Fig_npc}  
     659\caption{  \protect\label{Fig_npc}  
    660660Example of an unstable density profile treated by the non penetrative  
    661661convective adjustment algorithm. $1^{st}$ step: the initial profile is checked from  
    … …  
    713713%       Enhanced Vertical Diffusion  
    714714% ------------------------------------------------------------------------------------------------------------- 
    715 \subsection   [Enhanced Vertical Diffusion (\np{ln\_zdfevd})] 
    716               {Enhanced Vertical Diffusion (\np{ln\_zdfevd}=true)} 
     715\subsection   [Enhanced Vertical Diffusion (\protect\np{ln\_zdfevd})] 
     716              {Enhanced Vertical Diffusion (\protect\np{ln\_zdfevd}=true)} 
    717717\label{ZDF_evd} 
    718718 
    … …  
    745745%       Turbulent Closure Scheme  
    746746% ------------------------------------------------------------------------------------------------------------- 
    747 \subsection[Turbulent Closure Scheme (\key{zdf\{tke, gls, osm\}})]{Turbulent Closure Scheme (\key{zdftke}, \key{zdfgls} or \key{zdfosm})} 
     747\subsection[Turbulent Closure Scheme (\protect\key{zdf\{tke, gls, osm\}})]{Turbulent Closure Scheme (\protect\key{zdftke}, \protect\key{zdfgls} or \protect\key{zdfosm})} 
    748748\label{ZDF_tcs} 
    749749 
    … …  
    772772% Double Diffusion Mixing 
    773773% ================================================================ 
    774 \section  [Double Diffusion Mixing (\key{zdfddm})] 
    775       {Double Diffusion Mixing (\key{zdfddm})} 
     774\section  [Double Diffusion Mixing (\protect\key{zdfddm})] 
     775      {Double Diffusion Mixing (\protect\key{zdfddm})} 
    776776\label{ZDF_ddm} 
    777777 
    … …  
    813813\begin{figure}[!t]   \begin{center} 
    814814\includegraphics[width=0.99\textwidth]{Fig_zdfddm} 
    815 \caption{  \label{Fig_zdfddm} 
     815\caption{  \protect\label{Fig_zdfddm} 
    816816From \citet{Merryfield1999} : (a) Diapycnal diffusivities $A_f^{vT}$  
    817817and $A_f^{vS}$ for temperature and salt in regions of salt fingering. Heavy  
    … …  
    855855% Bottom Friction 
    856856% ================================================================ 
    857 \section  [Bottom and Top Friction (\textit{zdfbfr})]   {Bottom and Top Friction (\mdl{zdfbfr} module)} 
     857\section  [Bottom and Top Friction (\textit{zdfbfr})]   {Bottom and Top Friction (\protect\mdl{zdfbfr} module)} 
    858858\label{ZDF_bfr} 
    859859 
    … …  
    918918%       Linear Bottom Friction 
    919919% ------------------------------------------------------------------------------------------------------------- 
    920 \subsection{Linear Bottom Friction (\np{nn\_botfr} = 0 or 1) } 
     920\subsection{Linear Bottom Friction (\protect\np{nn\_botfr} = 0 or 1) } 
    921921\label{ZDF_bfr_linear} 
    922922 
    … …  
    962962%       Non-Linear Bottom Friction 
    963963% ------------------------------------------------------------------------------------------------------------- 
    964 \subsection{Non-Linear Bottom Friction (\np{nn\_botfr} = 2)} 
     964\subsection{Non-Linear Bottom Friction (\protect\np{nn\_botfr} = 2)} 
    965965\label{ZDF_bfr_nonlinear} 
    966966 
    … …  
    10031003%       Bottom Friction Log-layer 
    10041004% ------------------------------------------------------------------------------------------------------------- 
    1005 \subsection[Log-layer Bottom Friction enhancement (\np{ln\_loglayer} = .true.)]{Log-layer Bottom Friction enhancement (\np{nn\_botfr} = 2, \np{ln\_loglayer} = .true.)} 
     1005\subsection[Log-layer Bottom Friction enhancement (\protect\np{ln\_loglayer} = .true.)]{Log-layer Bottom Friction enhancement (\protect\np{nn\_botfr} = 2, \protect\np{ln\_loglayer} = .true.)} 
    10061006\label{ZDF_bfr_loglayer} 
    10071007 
    … …  
    10821082%       Implicit Bottom Friction 
    10831083% ------------------------------------------------------------------------------------------------------------- 
    1084 \subsection[Implicit Bottom Friction (\np{ln\_bfrimp})]{Implicit Bottom Friction (\np{ln\_bfrimp}$=$\textit{T})} 
     1084\subsection[Implicit Bottom Friction (\protect\np{ln\_bfrimp})]{Implicit Bottom Friction (\protect\np{ln\_bfrimp}$=$\textit{T})} 
    10851085\label{ZDF_bfr_imp} 
    10861086 
    … …  
    11351135%       Bottom Friction with split-explicit time splitting 
    11361136% ------------------------------------------------------------------------------------------------------------- 
    1137 \subsection[Bottom Friction with split-explicit time splitting]{Bottom Friction with split-explicit time splitting (\np{ln\_bfrimp})} 
     1137\subsection[Bottom Friction with split-explicit time splitting]{Bottom Friction with split-explicit time splitting (\protect\np{ln\_bfrimp})} 
    11381138\label{ZDF_bfr_ts} 
    11391139 
    … …  
    11921192% Tidal Mixing 
    11931193% ================================================================ 
    1194 \section{Tidal Mixing (\key{zdftmx})} 
     1194\section{Tidal Mixing (\protect\key{zdftmx})} 
    11951195\label{ZDF_tmx} 
    11961196 
    … …  
    12581258\begin{figure}[!t]   \begin{center} 
    12591259\includegraphics[width=0.90\textwidth]{Fig_ZDF_M2_K1_tmx} 
    1260 \caption{  \label{Fig_ZDF_M2_K1_tmx}  
     1260\caption{  \protect\label{Fig_ZDF_M2_K1_tmx}  
    12611261(a) M2 and (b) K1 internal wave drag energy from \citet{Carrere_Lyard_GRL03} ($W/m^2$). } 
    12621262\end{center}   \end{figure} 
    … …  
    12661266%        Indonesian area specific treatment  
    12671267% ------------------------------------------------------------------------------------------------------------- 
    1268 \subsection{Indonesian area specific treatment (\np{ln\_zdftmx\_itf})} 
     1268\subsection{Indonesian area specific treatment (\protect\np{ln\_zdftmx\_itf})} 
    12691269\label{ZDF_tmx_itf} 
    12701270 
    … …  
    13141314% Internal wave-driven mixing 
    13151315% ================================================================ 
    1316 \section{Internal wave-driven mixing (\key{zdftmx\_new})} 
     1316\section{Internal wave-driven mixing (\protect\key{zdftmx\_new})} 
    13171317\label{ZDF_tmx_new} 
    13181318 
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