Timeline


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matching tags

2019-05-09:

18:12 Changeset [10954] by acc

2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : Convert TRA modules and all knock on effects of these conversions. SETTE tested

12:48 Changeset [10953] by davestorkey

UKMO/NEMO_4.0_GO8_package branch : change info_level in iodef.xml file.

12:32 Ticket #2274 (Ill defined namelist variable nb_jpk_bdy) closed by jamesharle
fixed
12:29 Changeset [10952] by jamesharle

namelist_cfg REWIND moved inside loop for nambdy_dta reading as, by
default, there is only a single nambdy_dta block (See ticket #2274)

12:27 Changeset [10951] by jamesharle

namelist_cfg REWIND moved inside loop for nambdy_dta reading as, by
default, there is only a single nambdy_dta block (See ticket #2274)

2019-05-08:

19:16 2019WP/HPC-12_Mocavero_mpi3 edited by francesca
(diff)
19:08 2019WP/HPC-12_Mocavero_mpi3 created by francesca
19:08 Tag change on 2019WP/HPC-12_Mocavero_mpi3 by francesca
Tags WP added
17:36 Changeset [10950] by andmirek

GMED 462 replace nprint == 1 with nprint > 3

17:33 Changeset [10949] by andmirek

GMED 462 corrections to previous changes

15:01 Changeset [10948] by andmirek

GMED 462 iceberg model

12:32 Changeset [10947] by andmirek

GMED 462 improvements in text diagnostics

10:56 Changeset [10946] by acc

2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : Convert STO, TRD and USR modules and all knock on effects of these conversions. Note change to USR module may have implications for the TEST CASES (not tested yet). Standard SETTE tested only

2019-05-07:

19:29 Changeset [10945] by clem

finish repairing the code when only ice dynamics is activated

19:28 Changeset [10944] by clem

finish repairing the code when only ice dynamics is activated

18:37 Changeset [10943] by jchanut

Delete useless dvpt branch

18:36 Changeset [10942] by jchanut

Delete useless dvpt branch

16:39 Changeset [10941] by rrenshaw

new branch to add fixes to section transports for reanalysis

16:28 Changeset [10940] by dancopsey
15:54 Changeset [10939] by jchanut
15:47 Changeset [10938] by jchanut
13:50 Changeset [10937] by jchanut

#1959: Add hydrostatic pressure correction in barotropic equations

12:20 Changeset [10936] by jchanut

#1959 - Pressure gradient correction

11:56 Changeset [10935] by jchanut
11:42 2019WP/ENHANCE-09_Jerome_freesurface edited by jchanut
(diff)
11:29 Changeset [10934] by jamesharle

Update code to accommodate multiple instances of nb_jpk_bdy (See ticket
#2274)

11:21 Changeset [10933] by jamesharle

Updating code to accommodate mulitple instances of nb_jpk_bdy (See
ticket #2274)

2019-05-05:

21:45 Changeset [10932] by clem

make sure a simulation can run when some parts of ice thermodynamics are deactivated (only for very specific use)

21:44 Changeset [10931] by clem

make sure a simulation can run when some parts of ice thermodynamics are deactivated (only for very specific use)

21:37 Changeset [10930] by clem

solve a problem of conservation when ice advection is called twice (because of a cfl that is too large)

21:35 Changeset [10929] by clem

solve a problem of conservation when ice advection is called twice (because of a cfl that is too large)

2019-05-03:

17:44 Changeset [10928] by davestorkey

2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : Finish converting DYN module, including some updates to previously processed modules, but excluding dynnxt.F90 (which needs to be completely rewritten) and wet_dry.F90 - I need to talk to Enda about this.

17:21 Ticket #2277 (Problem in the trend routine for UBS+VVL option) created by blaizotac
==== Context For the release 3.6 (and 4.0) In the file traadv_ubs.F90: In …
17:13 Changeset [10927] by acc

2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : Tidy up the diurnal cycle code (DIU) to separate its stand-alone functionality from the cool skin and warm layer calculations. The latter can be called from step; the former needs to be kept out of step so that it can implement its own time-level indices.
The stand-alone functionality will need to be revisited once the new timestepping is finalised. SETTE tested (ORCA2_ICE and SAS).

14:32 Changeset [10926] by clem

complete previous commit

14:32 Changeset [10925] by clem

complete previous commit

12:00 Changeset [10924] by clem

solve a problem of restartability and reproducibility if ln_cndflx is activated in the ice model (used for coupling at the Met-Office)

11:59 Changeset [10923] by clem

solve a problem of restartability and reproducibility if ln_cndflx is activated in the ice model (used for coupling at the Met-Office)

11:55 New topic on Jobs created by fmasson
[post-doc] Postdoctoral fellowship in Arctic climate modelling/prediction available at the Université catholique de Louvain, Louvain-la-Neuve

2019-05-02:

17:10 Changeset [10922] by acc

2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : Convert IOM, LDF, OBS and SBC directories and compatibility changes elsewhere that these changes enforce. Changes pass SETTE and compare with original trunk results. Outstanding issues (currently with work-arounds) in DIU/step_diu.F90 and fld_bdy_interp within SBC/fldread.F90; proper soltions pending

2019-05-01:

12:56 Changeset [10921] by davestorkey

2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : finish conversion of OFF

11:27 Changeset [10920] by dancopsey

Use ice fractions from the last coupling time to calculate grid box means of coupled fluxes.

2019-04-30:

17:29 Changeset [10919] by davestorkey

2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps :

  1. Introduce ssh, uu_b, vv_b variables with time dimension (and pointers).
  2. Convert dynspg modules (but no change to subcycling in dynspg_ts.F90).
16:48 Changeset [10918] by dford

Add missing lbc_lnk, which helps with reproducibility.

16:44 Changeset [10917] by dford

Update chlorophyll climatology relaxation with biomass balancing, error checking, and diagnostic outputs.

13:45 Changeset [10916] by dford

Merge in revision 8148 to CO6_KD490_amm7_oper_fabm, which implemented relaxation to chlorophyll climatology for ERSEM.

13:43 Changeset [10915] by dford

Branch for AMM-ERSEM changes related to Met Office utils ticket 216.

10:16 Changeset [10914] by andmirek

GMED 450 flush iceberg files independent on lflush setting

10:04 Changeset [10913] by andmirek

GMED 450 changes in diagnostic messages for iceberg model

09:46 Changeset [10912] by andmirek

GMED 450 changes in namelist_ref

2019-04-29:

18:25 Ticket #2276 (SAS is not restartable) created by clem
SAS is currently reproducible but not restartable
18:14 Ticket #2275 (ln_zad_Aimp) closed by clem
fixed: fixed at r10906
18:11 Changeset [10911] by clem

Major change: the advection scheme UMx has been revisited to clean all the unphysical values which occured. Minor change: the ref config SPITZ12 has been slightly modified to test more parameterizations that are available in the code (melt ponds and landfast)

18:10 Changeset [10910] by clem

Major change: the advection scheme UMx has been revisited to clean all the unphysical values which occured. Minor change: the ref config SPITZ12 has been slightly modified to test more parameterizations that are available in the code (melt ponds and landfast)

17:58 Changeset [10909] by clem

correct a problem with indices for ice BDY at the eastern and northern boundaries

17:57 Changeset [10908] by clem

correct a problem with indices for ice BDY at the eastern and northern boundaries

17:54 Changeset [10907] by clem

solve ticket #2275

17:36 Changeset [10906] by clem

solve ticket #2275. Repro was just a matter of lbc (for Cu_adv) and an extended loop (for wi). Restartability was tricky (one needed to change r2dt by 2*rdt)

15:26 Ticket #2275 (ln_zad_Aimp) created by clem
Option for having implicit vertical advection (ln_zad_Aimp) is not …
13:50 Changeset [10905] by davestorkey

2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps :

  1. Alter top-level TOP routines so they use the time-level indices from step.F90 rather than having their own time level indices.
  2. First part of changes for OFF modules.

2019-04-26:

14:52 Changeset [10904] by davestorkey

UKMO/NEMO_4.0_GO8_package : include shlat2d option.

14:24 Changeset [10903] by davestorkey

UKMO/NEMO_4.0_old_tidal_mixing : science change.

13:59 Changeset [10902] by davestorkey

UKMO branch to reinstate old Simmons et al tidal mixing scheme at NEMO 4.0 to compare with new scheme.

13:54 Changeset [10901] by davestorkey

UKMO/NEMO_4.0_GO6_mixing : science change.

13:51 Changeset [10900] by anaguiar

Changes to allow checking qns balance and if all terms are correctly evaluated - Test 4 described in https://code.metoffice.gov.uk/trac/gmed/ticket/454#comment:2

12:42 Changeset [10899] by davestorkey

UKMO branch to implement GO6 option for nn_htau.

12:29 Changeset [10898] by davestorkey

UKMO/NEMO_4.0_GO8_package: Add cfgs/METO_GO directory for standard diagnostics files.

12:17 Changeset [10897] by davestorkey

UKMO/NEMO_4.0_GO8_package branch: Copy over changes from previous version of the branch.

  1. Implement datestamping of restarts.
  2. Local diagnostics, particularly vertically-interpolated MLD diagnostics.
  3. Restrict write-out in tra_bbl_init with IF(lwp).
10:41 Changeset [10896] by cetlod

Adding a first Draft of TOP documentation

07:37 Tag change on System Team/Agenda/2019-05-16 by clevy
Tags VC added

2019-04-25:

14:51 Changeset [10895] by wayne_gaudin

Fixed the GPU=1 compile option to not use managed memory

14:29 Changeset [10894] by wayne_gaudin

Improving autogeneration of various versions

12:30 Ticket #2274 (Ill defined namelist variable nb_jpk_bdy) created by jamesharle
==== Context Interpolation on-the-fly for BDY: nb_jpk_bdy (number of …
12:05 Changeset [10893] by davestorkey

branches/2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : update with Gurvan's stylistic modifications.

11:22 Changeset [10892] by andmirek

GMED 450 reviewer comments

10:19 Tag change on System Team/Agenda/2019-04-25 by clevy
Tags VC added

2019-04-24:

14:36 Changeset [10891] by clem

1) correct ice velocity at the ice edge ⇒ it changes (slightly) the ice properties at the edge. 2) apply bdy_ice_dyn at each subtime step of rheology ⇒ it changes ice velocties at the boundaries quite drastically.

14:35 Changeset [10890] by clem

1) correct ice velocity at the ice edge ⇒ it changes (slightly) the ice properties at the edge. 2) apply bdy_ice_dyn at each subtime step of rheology ⇒ it changes ice velocties at the boundaries quite drastically.

13:23 Ticket #2273 (Postprocess results in paraview?) closed by acc
wontfix: The short answer is no but NEMO and XIOS produce multi-dimensional NetCDF …
08:36 Ticket #2273 (Postprocess results in paraview?) created by samfr
==== Context I am a starter with Nemo but are used to use paraview …

2019-04-23:

17:21 Changeset [10889] by davestorkey

UKMO GO8 package branch relative to NEMO 4.0 release.

16:55 Changeset [10888] by davestorkey

branches/UKMO/NEMO_4.0_mirror : clear SVN keywords

16:48 Changeset [10887] by davestorkey

Mirror of NEMO 4.0 release in UKMO branch with SVN keywords removed. To form base revision for UKMO builds.

16:47 Changeset [10886] by davestorkey

Branch created in wrong location - removing.

16:37 Changeset [10885] by davestorkey

Mirror of NEMO 4.0 release in UKMO branch with SVN keywords removed. To form base revision for UKMO builds.

2019-04-19:

17:25 user/nicolasmartin/Input Archives edited by nicolasmartin
(diff)
15:46 user/nicolasmartin/Input Archives edited by nicolasmartin
(diff)

2019-04-18:

19:17 user/nicolasmartin edited by nicolasmartin
(diff)
17:36 user/nicolasmartin edited by nicolasmartin
(diff)
17:00 Changeset [10884] by davestorkey

branches/2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : dynzdf, trazdf, trczdf

14:29 Changeset [10883] by davestorkey

branches/2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps: some of the ocean physics modules.

2019-04-17:

17:40 Changeset [10882] by clem

correct the comments on the units of salt fluxes that were confusing

17:40 Changeset [10881] by clem

correct the comments on the units of salt fluxes that were confusing

12:02 Changeset [10880] by davestorkey

branches/2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps:

  1. Move time indices from dom_oce.F90 to step.F90.
  2. Implement time dimension for passive tracers with independent set of time indices in trcstp.F90.
  3. Update all the traadv and trcadv modules.

2019-04-16:

14:58 Changeset [10879] by anaguiar

Changes to reinstate heat fluxes, see https://code.metoffice.gov.uk/trac/gmed/ticket/454

13:53 Changeset [10878] by andmirek

GMED 450 fix for ln_ctl

11:50 Changeset [10877] by davestorkey

branches/2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : momentum advection and dynvor modules.

10:02 Changeset [10876] by davestorkey

branches/2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : changes to top-level modules.

2019-04-15:

17:55 Changeset [10875] by andmirek

GMED 450 open solver.stat by processor 0 only

16:22 Ticket #2271 (Change units of PISCES Ndeposition data) closed by cetlod
fixed: Done in v4.0 and trunk. The input data have also been changed
15:57 Changeset [10874] by davestorkey

branches/2019/dev_r10721_KERNEL-02_Storkey_Coward_IMMERSE_first_steps : Revert all changes so far in preparation for implementation of new design.

14:34 Ticket #2272 (Uninitialised variables in PISCES) closed by cetlod
fixed
14:34 Changeset [10873] by cetlod

trunk : Initialisation of some local arrays, see ticket:2272

14:32 Changeset [10872] by cetlod

v4.0 : Initialisation of some local arrays, see ticket:2272

14:31 Ticket #2272 (Uninitialised variables in PISCES) created by cetlod
==== Context In PISCES 2 variables used to compute some ligands …
13:47 Changeset [10871] by frrh

Missing ENDIF, correct logical var name for 3.6 compatibility not 4.0

13:00 Changeset [10870] by frrh

Apply correction to tnpeo calculation including reordering of k loop
as per #1884. This version of the code reflects the vn 3.6 STABLE branch
more than the vn 4.0 trunk. Although functionality is the same, here we
include the lbc_lnk of the STABLE branch (not used in the trunk)
and the workspace allocation of zpe as a pointer rather than the trunk
version which defines zpe (and other workspace arrays) simply as normal
allocatable arrays. i.e. I've opted to reflect the STABLE branch exactly
rather than to transplant more optimal code from the trunk out of context.

12:34 Changeset [10869] by cetlod

trunk:Change units of Nitrogen deposition data in PISCES, see ticket:2271

12:32 Changeset [10868] by cetlod

v4.0:Change units of Nitrogen deposition data in PISCES, see ticket:2271

12:29 Ticket #2271 (Change units of PISCES Ndeposition data) created by cetlod
==== Context In PISCES we assume that the units of Nitrogen deposition …
10:38 Changeset [10867] by andmirek

GMED 450: find nn_timing in icbrst.F90

2019-04-12:

17:35 New topic on Forks created by mtorresh
[usp-cfg] NEMO-FAMB-ERSEM compile
16:10 Changeset [10866] by nicolasmartin

Fix on regexp for counters and few improvments
Thanks again Simon for your attentiveness!

                                            code(ratio)   notes(ratio)   blank(ratio)     sum
release-3.4/NEMOGCM/NEMO/LIM_SRC_2          4399(62,0%)    1975(27,8%)     715(10,0%)    7089
release-3.4/NEMOGCM/NEMO/LIM_SRC_3          9045(61,7%)    4019(27,4%)    1587(10,8%)   14651
release-3.4/NEMOGCM/NEMO/NST_SRC            1675(67,9%)     358(14,5%)     432(17,5%)    2465
release-3.4/NEMOGCM/NEMO/OFF_SRC            1371(63,8%)     588(27,3%)     188( 8,7%)    2147
release-3.4/NEMOGCM/NEMO/OPA_SRC           64967(61,4%)   29926(28,3%)   10850(10,2%)  105743
release-3.4/NEMOGCM/NEMO/OPATAM_SRC        24646(60,9%)   12706(31,4%)    3108( 7,6%)   40460
release-3.4/NEMOGCM/NEMO/TOP_SRC           13939(61,6%)    5932(26,2%)    2728(12,0%)   22599
                                     sum  120042(61,5%)   55504(28,4%)   19608(10,0%)  195154
release-3.6/NEMOGCM/NEMO/LIM_SRC_2          4530(62,4%)    1991(27,4%)     733(10,1%)    7254
release-3.6/NEMOGCM/NEMO/LIM_SRC_3          7390(59,3%)    3631(29,1%)    1423(11,4%)   12444
release-3.6/NEMOGCM/NEMO/NST_SRC            3345(67,5%)    1091(22,0%)     518(10,4%)    4954
release-3.6/NEMOGCM/NEMO/OFF_SRC            1441(64,3%)     593(26,4%)     204( 9,1%)    2238
release-3.6/NEMOGCM/NEMO/OOO_SRC            3476(70,9%)     945(19,2%)     476( 9,7%)    4897
release-3.6/NEMOGCM/NEMO/OPA_SRC           78997(63,3%)   33269(26,6%)   12340( 9,9%)  124606
release-3.6/NEMOGCM/NEMO/SAS_SRC            1187(57,9%)     659(32,1%)     204( 9,9%)    2050
release-3.6/NEMOGCM/NEMO/TOP_SRC           15319(61,1%)    6823(27,2%)    2903(11,5%)   25045
                                     sum  115685(63,0%)   49002(26,7%)   18801(10,2%)  183488
release-4.0/src/ICE                         8638(58,8%)    4951(33,7%)    1094( 7,4%)   14683
release-4.0/src/NST                         4165(67,7%)    1537(25,0%)     446( 7,2%)    6148
release-4.0/src/OCE                        66946(63,9%)   29102(27,8%)    8593( 8,2%)  104641
release-4.0/src/OFF                          882(64,5%)     399(29,2%)      85( 6,2%)    1366
release-4.0/src/SAO                         2002(72,7%)     464(16,8%)     286(10,3%)    2752
release-4.0/src/SAS                         1186(60,8%)     606(31,0%)     157( 8,0%)    1949
release-4.0/src/TOP                        17069(62,3%)    7690(28,1%)    2596( 9,4%)   27355
                                     sum  100888(63,4%)   44749(28,1%)   13257( 8,3%)  158894
11:58 Changeset [10865] by smueller

Removal of redundant source code in modules bdydta and bdytides (ticket #2194)

2019-04-11:

17:32 Changeset [10864] by nicolasmartin

Add a simple script to calculate basic numbers on NEMO releases

                                            code    comm(ratio)   total
release-3.4/NEMOGCM/NEMO/LIM_SRC_2          6358    1975(23,7%)    8333
release-3.4/NEMOGCM/NEMO/LIM_SRC_3         13015    4019(23,5%)   17034
release-3.4/NEMOGCM/NEMO/NST_SRC            2071     358(14,7%)    2429
release-3.4/NEMOGCM/NEMO/OFF_SRC            1967     588(23,0%)    2555
release-3.4/NEMOGCM/NEMO/OPA_SRC           96005   29926(23,7%)  125931
release-3.4/NEMOGCM/NEMO/OPATAM_SRC        37209   12706(25,4%)   49915
release-3.4/NEMOGCM/NEMO/TOP_SRC           20111    5932(22,7%)   26043
                                   total  176736   55504(23,8%)  232240
release-3.6/NEMOGCM/NEMO/LIM_SRC_2          6552    1991(23,3%)    8543
release-3.6/NEMOGCM/NEMO/LIM_SRC_3         11200    3631(24,4%)   14831
release-3.6/NEMOGCM/NEMO/NST_SRC            4408    1091(19,8%)    5499
release-3.6/NEMOGCM/NEMO/OFF_SRC            2037     593(22,5%)    2630
release-3.6/NEMOGCM/NEMO/OOO_SRC            4495     945(17,3%)    5440
release-3.6/NEMOGCM/NEMO/OPA_SRC          113711   33269(22,6%)  146980
release-3.6/NEMOGCM/NEMO/SAS_SRC            1855     659(26,2%)    2514
release-3.6/NEMOGCM/NEMO/TOP_SRC           22371    6823(23,3%)   29194
                                   total  166629   49002(22,7%)  215631
release-4.0/src/ICE                        13721    4951(26,5%)   18672
release-4.0/src/NST                         5565    1537(21,6%)    7102
release-4.0/src/OCE                        96572   29102(23,1%)  125674
release-4.0/src/OFF                         1285     399(23,6%)    1684
release-4.0/src/SAO                         2530     464(15,4%)    2994
release-4.0/src/SAS                         1805     606(25,1%)    2411
release-4.0/src/TOP                        24789    7690(23,6%)   32479
                                   total  146267   44749(23,4%)  191016
17:26 Changelog edited by clevy
(diff)
17:11 Changeset [10863] by frrh

Correct jk starting index so that operations don't go OOB on rab_n, etc.
This at least should prevent OOB ops. Whether it's a final valid solution is
still TBA.

16:51 Changeset [10862] by frrh

Branch to fix long standing OOB ops in diaar5.F90

14:45 Changeset [10861] by smueller

Suppression of optional complex conjugation of tidal input data at open boundaries (ticket #2194)

11:35 Changeset [10860] by smueller

Relocation of the time-of-day computation in subroutine upd_tide (module tide_mod) to its callers (ticket #2194)

2019-04-10:

16:18 Ticket #2270 (segfault in sbcdcy.F90) created by andmirek
==== Context NEMO (Met Office GO8 configuration) fails with segfault in …
12:19 Changeset [10859] by kingr

Modified zdfglf.F90 to allow merge with AMM15 pkg_coupled branch.

12:08 Changeset [10858] by kingr

Creating branch to merge changes required for ocean-wave coupling in AMM15

10:16 Changeset [10857] by andmirek

fix for segfault error found by pgi compiler

2019-04-09:

17:46 Changeset [10856] by smueller

Replacement of the temporary modification of a global variable in subroutine tide_update (module tide_mod) by an alternative, local mechanism (ticket #2194)

13:32 Changeset [10855] by smueller

Simplification of subroutine tide_update (module tide_mod) by transferring variable initialisations to other subroutines (ticket #2194)

12:31 Changeset [10854] by kingr

Minor changes to allow merging with OBS branch and tr@5518.

11:04 Changeset [10853] by andmirek

ticket #2197 bugfix and change in NaN detection

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