[7912] | 1 | MODULE bio_medusa_mod |
---|
| 2 | !!====================================================================== |
---|
| 3 | !! *** MODULE bio_medusa_mod *** |
---|
| 4 | !! MEDUSA variables : module for MEDUSA variables which are shared |
---|
| 5 | !! across subroutines |
---|
| 6 | !!====================================================================== |
---|
| 7 | !! History : |
---|
| 8 | !! - ! 2017-04 (M. Stringer) Code taken from trcbio_medusa.F90 |
---|
| 9 | !!---------------------------------------------------------------------- |
---|
| 10 | #if defined key_medusa |
---|
| 11 | !!---------------------------------------------------------------------- |
---|
| 12 | !! 'key_medusa' MEDUSA |
---|
| 13 | !!---------------------------------------------------------------------- |
---|
[8023] | 14 | !! Variable conventions |
---|
| 15 | !!---------------------------------------------------------------------- |
---|
| 16 | !! |
---|
| 17 | !! names: z*** - state variable |
---|
| 18 | !! f*** - function (or temporary variable used in part of a function) |
---|
| 19 | !! b*** - right-hand part (sources and sinks) |
---|
| 20 | !! i*** - integer variable (usually used in yes/no flags) |
---|
| 21 | !!---------------------------------------------------------------------- |
---|
[7912] | 22 | USE par_kind, ONLY: wp |
---|
| 23 | |
---|
| 24 | IMPLICIT NONE |
---|
| 25 | PUBLIC |
---|
| 26 | |
---|
| 27 | PUBLIC bio_medusa_alloc ! called by trcini.F90 |
---|
| 28 | |
---|
[7938] | 29 | !! model state variables |
---|
[7975] | 30 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: zchn,zchd,zphn,zphd,zpds,zzmi |
---|
| 31 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: zzme,zdet,zdtc,zdin,zsil,zfer |
---|
[7938] | 32 | # if defined key_roam |
---|
[7975] | 33 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: zdic, zalk, zoxy |
---|
| 34 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: ztmp, zsal |
---|
[7938] | 35 | # endif |
---|
| 36 | # if defined key_mocsy |
---|
[7975] | 37 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: zpho |
---|
[7938] | 38 | # endif |
---|
[7912] | 39 | |
---|
[7986] | 40 | !! integrated source and sink terms |
---|
| 41 | REAL(wp) :: b0 |
---|
| 42 | |
---|
[7975] | 43 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fthetan,faln,fchn1,fchn |
---|
| 44 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fjln,fprn,frn |
---|
| 45 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fthetad,fald,fchd1,fchd |
---|
| 46 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fjld,fprd,frd |
---|
| 47 | |
---|
| 48 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fjlim_pn, fjlim_pd |
---|
| 49 | !! AXY (03/02/11): add in Liebig terms |
---|
| 50 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fpnlim, fpdlim |
---|
| 51 | !! AXY (16/07/09): add in Eppley curve functionality |
---|
| 52 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fun_T,xvpnT,xvpdT |
---|
| 53 | |
---|
| 54 | !! AXY (16/05/11): per Katya's prompting, add in new T-dependence |
---|
| 55 | !! for phytoplankton growth only (i.e. no change |
---|
| 56 | !! for remineralisation) |
---|
| 57 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fun_Q10 |
---|
[7912] | 58 | !! AXY (01/03/10): add in mixed layer PP diagnostics |
---|
| 59 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fprn_ml,fprd_ml |
---|
[7975] | 60 | !! |
---|
| 61 | !! nutrient limiting factors |
---|
| 62 | !! N and Fe (renaming ffln to ffln2 to avoid conflict with |
---|
| 63 | !! ffln in module sms_medusa - marc 25/4/17) |
---|
| 64 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fnln,ffln2 |
---|
| 65 | !! N, Fe and Si |
---|
| 66 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fnld,ffld,fsld,fsld2 |
---|
| 67 | !! |
---|
| 68 | !! silicon cycle |
---|
| 69 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fsin,fnsi,fprds,fsdiss |
---|
[7912] | 70 | |
---|
[7978] | 71 | !! iron cycle; includes parameters for Parekh et al. (2005) iron scheme |
---|
| 72 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: ffetop,ffebot,ffescav |
---|
[7912] | 73 | !! Variable for iron-ligand system |
---|
| 74 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: xFree |
---|
| 75 | |
---|
[7975] | 76 | !! Microzooplankton grazing |
---|
| 77 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fmi1,fmi,fgmipn,fgmid,fgmidc |
---|
| 78 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: finmi,ficmi,fstarmi,fmith |
---|
| 79 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fmigrow,fmiexcr,fmiresp |
---|
| 80 | !! |
---|
| 81 | !! Mesozooplankton grazing |
---|
| 82 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fme1,fme,fgmepn,fgmepd |
---|
| 83 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fgmepds,fgmezmi,fgmed,fgmedc |
---|
| 84 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: finme,ficme,fstarme,fmeth |
---|
| 85 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fmegrow,fmeexcr,fmeresp |
---|
| 86 | !! |
---|
[7986] | 87 | !! mortality/Remineralisation |
---|
[7975] | 88 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fdpn,fdpd,fdpds,fdzmi,fdzme,fdd |
---|
[7978] | 89 | # if defined key_roam |
---|
| 90 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fddc |
---|
| 91 | # endif |
---|
[7975] | 92 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fdpn2,fdpd2,fdpds2,fdzmi2,fdzme2 |
---|
[7986] | 93 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fslown, fslowc |
---|
[7927] | 94 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fslownflux, fslowcflux |
---|
[8012] | 95 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fregen,fregensi |
---|
[7912] | 96 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fregenfast,fregenfastsi |
---|
| 97 | # if defined key_roam |
---|
| 98 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fregenfastc |
---|
| 99 | # endif |
---|
| 100 | |
---|
| 101 | !! Particle flux |
---|
[7975] | 102 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fdep1,fcaco3 |
---|
[7978] | 103 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: ftempn,ftempsi,ftempfe |
---|
| 104 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: ftempc,ftempca |
---|
| 105 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: freminn,freminsi,freminfe |
---|
| 106 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: freminc,freminca |
---|
[7912] | 107 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: ffastn,ffastsi,ffastfe |
---|
| 108 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: ffastc,ffastca |
---|
[7978] | 109 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fprotf |
---|
[7912] | 110 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fsedn,fsedsi,fsedfe,fsedc,fsedca |
---|
| 111 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fccd |
---|
[7978] | 112 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fccd_dep |
---|
[7912] | 113 | |
---|
[7986] | 114 | !! AXY (08/07/11): fate of fast detritus reaching the seafloor |
---|
| 115 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: ffast2slown,ffast2slowc |
---|
| 116 | |
---|
[7912] | 117 | !! water column nutrient and flux integrals |
---|
| 118 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: ftot_n,ftot_si,ftot_fe |
---|
| 119 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fflx_n,fflx_si,fflx_fe |
---|
| 120 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fifd_n,fifd_si,fifd_fe |
---|
| 121 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fofd_n,fofd_si,fofd_fe |
---|
| 122 | # if defined key_roam |
---|
| 123 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: ftot_c,ftot_a,ftot_o2 |
---|
| 124 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fflx_c,fflx_a,fflx_o2 |
---|
[8023] | 125 | ! I don't think fifd_a, fifd_o2, fofd_a or fofd_o2 are used - marc 11/5/17 |
---|
| 126 | ! REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fifd_c,fifd_a,fifd_o2 |
---|
| 127 | ! REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fofd_c,fofd_a,fofd_o2 |
---|
| 128 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fifd_c |
---|
| 129 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fofd_c |
---|
[7912] | 130 | # endif |
---|
| 131 | |
---|
| 132 | !! Zooplankton grazing integrals |
---|
| 133 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fzmi_i,fzmi_o,fzme_i,fzme_o |
---|
| 134 | |
---|
| 135 | !! Limitation term temporary variables |
---|
| 136 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: ftot_pn,ftot_pd |
---|
| 137 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: ftot_zmi,ftot_zme,ftot_det,ftot_dtc |
---|
| 138 | |
---|
[7996] | 139 | !! use biological fluxes (1) or not (0) |
---|
| 140 | INTEGER :: ibio_switch |
---|
| 141 | !! |
---|
[7975] | 142 | !! diagnose fluxes (should only be used in 1D runs) |
---|
| 143 | INTEGER :: idf, idfval |
---|
| 144 | |
---|
[7912] | 145 | !! Nitrogen and silicon production and consumption |
---|
| 146 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fnit_prod,fnit_cons |
---|
| 147 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fsil_prod,fsil_cons |
---|
| 148 | |
---|
[8023] | 149 | # if defined key_roam |
---|
[7938] | 150 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: f_xco2a |
---|
| 151 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: f_ph,f_pco2w,f_h2co3 |
---|
| 152 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: f_hco3,f_co3,f_co2flux |
---|
| 153 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: f_TDIC,f_TALK,f_dcf,f_henry |
---|
| 154 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: f_pp0 |
---|
| 155 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: f_kw660,f_o2flux,f_o2sat |
---|
[7912] | 156 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: f_omcal,f_omarg |
---|
| 157 | |
---|
[7938] | 158 | !! AXY (23/06/15): additional diagnostics for MOCSY and oxygen |
---|
| 159 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: f_fco2w,f_BetaD,f_rhosw,f_opres |
---|
| 160 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: f_insitut,f_pco2atm,f_fco2atm |
---|
| 161 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: f_schmidtco2,f_kwco2,f_K0 |
---|
| 162 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: f_co2starair,f_dpco2,f_kwo2 |
---|
| 163 | |
---|
| 164 | INTEGER, ALLOCATABLE, DIMENSION(:,:) :: iters |
---|
| 165 | |
---|
[7912] | 166 | !! Carbon, alkalinity production and consumption |
---|
| 167 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fcomm_resp |
---|
| 168 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: fcar_prod,fcar_cons |
---|
| 169 | |
---|
| 170 | !! Oxygen production and consumption (and non-consumption) |
---|
| 171 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: foxy_prod,foxy_cons,foxy_anox |
---|
| 172 | |
---|
[7958] | 173 | !! Add DMS in MEDUSA for UKESM1 model |
---|
| 174 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: dms_surf |
---|
| 175 | !! AXY (13/03/15): add in other DMS calculations |
---|
| 176 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: dms_andr,dms_simo,dms_aran,dms_hall |
---|
[8023] | 177 | # endif |
---|
[7958] | 178 | |
---|
[7912] | 179 | !! Benthic fluxes |
---|
| 180 | INTEGER :: ibenthic |
---|
| 181 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: f_sbenin_n,f_sbenin_fe,f_sbenin_c |
---|
| 182 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: f_fbenin_n,f_fbenin_fe,f_fbenin_si |
---|
| 183 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: f_fbenin_c,f_fbenin_ca |
---|
| 184 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: f_benout_n,f_benout_fe,f_benout_si |
---|
| 185 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: f_benout_c,f_benout_ca |
---|
| 186 | |
---|
| 187 | !! Benthic fluxes of CaCO3 that shouldn't happen because of lysocline |
---|
| 188 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: f_benout_lyso_ca |
---|
| 189 | |
---|
| 190 | !! riverine fluxes |
---|
| 191 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: f_runoff,f_riv_n,f_riv_si |
---|
| 192 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: f_riv_c,f_riv_alk |
---|
[7996] | 193 | !! AXY (19/07/12): variables for local riverine fluxes to handle |
---|
| 194 | !! inputs below surface |
---|
| 195 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: f_riv_loc_n,f_riv_loc_si |
---|
| 196 | REAL(wp), ALLOCATABLE, DIMENSION(:,:) :: f_riv_loc_c, f_riv_loc_alk |
---|
[7912] | 197 | |
---|
| 198 | !! Jpalm -- 11-10-2015 -- adapt diag to iom_use |
---|
| 199 | !! 2D var for diagnostics. |
---|
| 200 | REAL(wp), POINTER, DIMENSION(:,:) :: fprn2d, fdpn2d, fprd2d, fdpd2d |
---|
| 201 | REAL(wp), POINTER, DIMENSION(:,:) :: fprds2d, fsdiss2d, fgmipn2d |
---|
| 202 | REAL(wp), POINTER, DIMENSION(:,:) :: fgmid2d, fdzmi2d, fgmepn2d |
---|
| 203 | REAL(wp), POINTER, DIMENSION(:,:) :: fgmepd2d, fgmezmi2d, fgmed2d |
---|
| 204 | REAL(wp), POINTER, DIMENSION(:,:) :: fdzme2d, fslown2d, fdd2d |
---|
| 205 | REAL(wp), POINTER, DIMENSION(:,:) :: ffetop2d, ffebot2d, ffescav2d |
---|
| 206 | REAL(wp), POINTER, DIMENSION(:,:) :: fjln2d, fnln2d, ffln2d, fjld2d |
---|
| 207 | REAL(wp), POINTER, DIMENSION(:,:) :: fnld2d, ffld2d, fsld2d2 |
---|
| 208 | REAL(wp), POINTER, DIMENSION(:,:) :: fsld2d, fregen2d, fregensi2d |
---|
| 209 | REAL(wp), POINTER, DIMENSION(:,:) :: ftempn2d, ftempsi2d, ftempfe2d |
---|
| 210 | REAL(wp), POINTER, DIMENSION(:,:) :: ftempc2d, ftempca2d, freminn2d |
---|
| 211 | REAL(wp), POINTER, DIMENSION(:,:) :: freminsi2d, freminfe2d |
---|
| 212 | REAL(wp), POINTER, DIMENSION(:,:) :: freminc2d, freminca2d |
---|
| 213 | REAL(wp), POINTER, DIMENSION(:,:) :: zw2d |
---|
| 214 | # if defined key_roam |
---|
| 215 | REAL(wp), POINTER, DIMENSION(:,:) :: ffastca2d, rivn2d, rivsi2d |
---|
| 216 | REAL(wp), POINTER, DIMENSION(:,:) :: rivc2d, rivalk2d, fslowc2d |
---|
| 217 | REAL(wp), POINTER, DIMENSION(:,:) :: fdpn22d, fdpd22d, fdzmi22d |
---|
| 218 | REAL(wp), POINTER, DIMENSION(:,:) :: fdzme22d, zimesn2d, zimesd2d |
---|
| 219 | REAL(wp), POINTER, DIMENSION(:,:) :: zimesc2d, zimesdc2d, ziexcr2d |
---|
| 220 | REAL(wp), POINTER, DIMENSION(:,:) :: ziresp2d, zigrow2d, zemesn2d |
---|
| 221 | REAL(wp), POINTER, DIMENSION(:,:) :: zemesd2d, zemesc2d, zemesdc2d |
---|
| 222 | REAL(wp), POINTER, DIMENSION(:,:) :: zeexcr2d, zeresp2d, zegrow2d |
---|
| 223 | REAL(wp), POINTER, DIMENSION(:,:) :: mdetc2d, gmidc2d, gmedc2d |
---|
| 224 | REAL(wp), POINTER, DIMENSION(:,:) :: f_pco2a2d, f_pco2w2d, f_co2flux2d |
---|
| 225 | REAL(wp), POINTER, DIMENSION(:,:) :: f_TDIC2d, f_TALK2d, f_kw6602d |
---|
| 226 | REAL(wp), POINTER, DIMENSION(:,:) :: f_pp02d, f_o2flux2d, f_o2sat2d |
---|
| 227 | REAL(wp), POINTER, DIMENSION(:,:) :: dms_andr2d, dms_simo2d, dms_aran2d |
---|
| 228 | REAL(wp), POINTER, DIMENSION(:,:) :: dms_hall2d, dms_surf2d |
---|
| 229 | REAL(wp), POINTER, DIMENSION(:,:) :: iben_n2d, iben_fe2d, iben_c2d |
---|
| 230 | REAL(wp), POINTER, DIMENSION(:,:) :: iben_si2d, iben_ca2d, oben_n2d |
---|
| 231 | REAL(wp), POINTER, DIMENSION(:,:) :: oben_fe2d, oben_c2d, oben_si2d |
---|
| 232 | REAL(wp), POINTER, DIMENSION(:,:) :: oben_ca2d, sfr_ocal2d |
---|
| 233 | REAL(wp), POINTER, DIMENSION(:,:) :: sfr_oarg2d, lyso_ca2d |
---|
| 234 | !! AXY (23/11/16): extra MOCSY diagnostics |
---|
| 235 | REAL(wp), POINTER, DIMENSION(:,:) :: f_xco2a_2d, f_fco2w_2d, f_fco2a_2d |
---|
| 236 | REAL(wp), POINTER, DIMENSION(:,:) :: f_ocnrhosw_2d, f_ocnschco2_2d |
---|
| 237 | REAL(wp), POINTER, DIMENSION(:,:) :: f_ocnkwco2_2d |
---|
| 238 | REAL(wp), POINTER, DIMENSION(:,:) :: f_ocnk0_2d, f_co2starair_2d |
---|
| 239 | REAL(wp), POINTER, DIMENSION(:,:) :: f_ocndpco2_2d |
---|
| 240 | # endif |
---|
| 241 | !! |
---|
| 242 | !! 3D var for diagnostics. |
---|
| 243 | REAL(wp), POINTER, DIMENSION(:,:,:) :: tpp3d, detflux3d, remin3dn |
---|
| 244 | !! |
---|
| 245 | # if defined key_roam |
---|
| 246 | !! AXY (04/11/16) |
---|
| 247 | !! 2D var for new CMIP6 diagnostics (behind a key_roam ifdef |
---|
| 248 | !! for simplicity) |
---|
| 249 | REAL(wp), POINTER, DIMENSION(:,:) :: fgco2,intdissic,intdissin |
---|
| 250 | REAL(wp), POINTER, DIMENSION(:,:) :: intdissisi,inttalk,o2min,zo2min |
---|
| 251 | REAL(wp), POINTER, DIMENSION(:,:) :: fbddtalk,fbddtdic,fbddtdife |
---|
| 252 | REAL(wp), POINTER, DIMENSION(:,:) :: fbddtdin,fbddtdisi |
---|
| 253 | !! |
---|
| 254 | !! 3D var for new CMIP6 diagnostics |
---|
| 255 | REAL(wp), POINTER, DIMENSION(:,:,:) :: tppd3 |
---|
| 256 | REAL(wp), POINTER, DIMENSION(:,:,:) :: bddtalk3,bddtdic3,bddtdife3 |
---|
| 257 | REAL(wp), POINTER, DIMENSION(:,:,:) :: bddtdin3, bddtdisi3 |
---|
| 258 | REAL(wp), POINTER, DIMENSION(:,:,:) :: fd_nit3,fd_sil3,fd_car3,fd_cal3 |
---|
| 259 | REAL(wp), POINTER, DIMENSION(:,:,:) :: co33,co3satarag3,co3satcalc3,dcalc3 |
---|
| 260 | REAL(wp), POINTER, DIMENSION(:,:,:) :: expc3,expn3 |
---|
| 261 | REAL(wp), POINTER, DIMENSION(:,:,:) :: fediss3,fescav3 |
---|
| 262 | REAL(wp), POINTER, DIMENSION(:,:,:) :: migrazp3,migrazd3,megrazp3 |
---|
| 263 | REAL(wp), POINTER, DIMENSION(:,:,:) :: megrazd3, megrazz3 |
---|
| 264 | REAL(wp), POINTER, DIMENSION(:,:,:) :: o2sat3,pbsi3,pcal3,remoc3 |
---|
| 265 | REAL(wp), POINTER, DIMENSION(:,:,:) :: pnlimj3,pnlimn3,pnlimfe3 |
---|
| 266 | REAL(wp), POINTER, DIMENSION(:,:,:) :: pdlimj3,pdlimn3,pdlimfe3,pdlimsi3 |
---|
| 267 | # endif |
---|
| 268 | !!---------------------------------------------------------------------- |
---|
| 269 | !! NEMO/TOP 3.3.1 , NEMO Consortium (2010) |
---|
| 270 | !! $Id$ |
---|
| 271 | !! Software governed by the CeCILL licence (NEMOGCM/NEMO_CeCILL.txt) |
---|
| 272 | !!---------------------------------------------------------------------- |
---|
| 273 | CONTAINS |
---|
| 274 | |
---|
| 275 | INTEGER FUNCTION bio_medusa_alloc() |
---|
| 276 | !!------------------------------------------------------------------- |
---|
| 277 | !! *** ROUTINE bio_medusa_alloc *** |
---|
| 278 | !!------------------------------------------------------------------- |
---|
| 279 | USE lib_mpp, ONLY: ctl_warn |
---|
| 280 | USE par_oce, ONLY: jpi, jpj |
---|
| 281 | !!------------------------------------------------------------------- |
---|
| 282 | ! |
---|
[7938] | 283 | ALLOCATE(zchn(jpi,jpj),zchd(jpi,jpj),zphn(jpi,jpj), & |
---|
| 284 | zphd(jpi,jpj),zpds(jpi,jpj),zzmi(jpi,jpj), & |
---|
| 285 | zzme(jpi,jpj),zdet(jpi,jpj),zdtc(jpi,jpj), & |
---|
| 286 | zdin(jpi,jpj),zsil(jpi,jpj),zfer(jpi,jpj), & |
---|
[8023] | 287 | # if defined key_roam |
---|
[7938] | 288 | zdic(jpi,jpj),zalk(jpi,jpj),zoxy(jpi,jpj), & |
---|
| 289 | ztmp(jpi,jpj),zsal(jpi,jpj), & |
---|
[8023] | 290 | # endif |
---|
| 291 | # if defined key_mocsy |
---|
[7938] | 292 | zpho(jpi,jpj), & |
---|
[8023] | 293 | # endif |
---|
[7975] | 294 | fthetan(jpi,jpj),faln(jpi,jpj),fchn1(jpi,jpj), & |
---|
| 295 | fchn(jpi,jpj),fjln(jpi,jpj),fprn(jpi,jpj), & |
---|
| 296 | frn(jpi,jpj), & |
---|
| 297 | fthetad(jpi,jpj),fald(jpi,jpj),fchd1(jpi,jpj), & |
---|
| 298 | fchd(jpi,jpj),fjld(jpi,jpj),fprd(jpi,jpj), & |
---|
| 299 | frd(jpi,jpj), & |
---|
| 300 | fjlim_pn(jpi,jpj), fjlim_pd(jpi,jpj), & |
---|
| 301 | fpnlim(jpi,jpj), fpdlim(jpi,jpj), & |
---|
| 302 | fun_T(jpi,jpj),xvpnT(jpi,jpj),xvpdT(jpi,jpj), & |
---|
| 303 | fun_Q10(jpi,jpj), & |
---|
[7938] | 304 | fprn_ml(jpi,jpj),fprd_ml(jpi,jpj), & |
---|
[7975] | 305 | fnln(jpi,jpj),ffln2(jpi,jpj), & |
---|
| 306 | fnld(jpi,jpj),ffld(jpi,jpj),fsld(jpi,jpj), & |
---|
| 307 | fsld2(jpi,jpj), & |
---|
| 308 | fsin(jpi,jpj),fnsi(jpi,jpj),fprds(jpi,jpj), & |
---|
| 309 | fsdiss(jpi,jpj), & |
---|
[7978] | 310 | ffetop(jpi,jpj),ffebot(jpi,jpj),ffescav(jpi,jpj), & |
---|
[7912] | 311 | xFree(jpi,jpj), & |
---|
[7975] | 312 | fmi1(jpi,jpj),fmi(jpi,jpj),fgmipn(jpi,jpj), & |
---|
| 313 | fgmid(jpi,jpj),fgmidc(jpi,jpj), & |
---|
| 314 | finmi(jpi,jpj),ficmi(jpi,jpj),fstarmi(jpi,jpj), & |
---|
| 315 | fmith(jpi,jpj),fmigrow(jpi,jpj),fmiexcr(jpi,jpj), & |
---|
| 316 | fmiresp(jpi,jpj), & |
---|
| 317 | fme1(jpi,jpj),fme(jpi,jpj),fgmepn(jpi,jpj), & |
---|
| 318 | fgmepd(jpi,jpj),fgmepds(jpi,jpj),fgmezmi(jpi,jpj), & |
---|
| 319 | fgmed(jpi,jpj),fgmedc(jpi,jpj), & |
---|
| 320 | finme(jpi,jpj),ficme(jpi,jpj),fstarme(jpi,jpj), & |
---|
| 321 | fmeth(jpi,jpj),fmegrow(jpi,jpj),fmeexcr(jpi,jpj), & |
---|
| 322 | fmeresp(jpi,jpj), & |
---|
| 323 | fdpn(jpi,jpj),fdpd(jpi,jpj),fdpds(jpi,jpj), & |
---|
| 324 | fdzmi(jpi,jpj),fdzme(jpi,jpj),fdd(jpi,jpj), & |
---|
[8023] | 325 | # if defined key_roam |
---|
[7978] | 326 | fddc(jpi,jpj), & |
---|
[8023] | 327 | # endif |
---|
[7975] | 328 | fdpn2(jpi,jpj),fdpd2(jpi,jpj),fdpds2(jpi,jpj), & |
---|
| 329 | fdzmi2(jpi,jpj),fdzme2(jpi,jpj), & |
---|
[8012] | 330 | fslown(jpi,jpj),fslowc(jpi,jpj), & |
---|
[7927] | 331 | fslownflux(jpi,jpj),fslowcflux(jpi,jpj), & |
---|
[8012] | 332 | fregen(jpi,jpj),fregensi(jpi,jpj), & |
---|
[7912] | 333 | fregenfast(jpi,jpj),fregenfastsi(jpi,jpj), & |
---|
| 334 | # if defined key_roam |
---|
| 335 | fregenfastc(jpi,jpj), & |
---|
| 336 | # endif |
---|
[7975] | 337 | fdep1(jpi,jpj),fcaco3(jpi,jpj), & |
---|
[7978] | 338 | ftempn(jpi,jpj),ftempsi(jpi,jpj),ftempfe(jpi,jpj), & |
---|
| 339 | ftempc(jpi,jpj),ftempca(jpi,jpj), & |
---|
| 340 | freminn(jpi,jpj),freminsi(jpi,jpj),freminfe(jpi,jpj), & |
---|
| 341 | freminc(jpi,jpj),freminca(jpi,jpj), & |
---|
[7912] | 342 | ffastn(jpi,jpj),ffastsi(jpi,jpj),ffastfe(jpi,jpj), & |
---|
| 343 | ffastc(jpi,jpj),ffastca(jpi,jpj), & |
---|
[7978] | 344 | fprotf(jpi,jpj), & |
---|
[7912] | 345 | fsedn(jpi,jpj),fsedsi(jpi,jpj),fsedfe(jpi,jpj), & |
---|
| 346 | fsedc(jpi,jpj),fsedca(jpi,jpj), & |
---|
| 347 | fccd(jpi,jpj), & |
---|
[7978] | 348 | fccd_dep(jpi,jpj), & |
---|
[7986] | 349 | ffast2slown(jpi,jpj),ffast2slowc(jpi,jpj), & |
---|
[7912] | 350 | ftot_n(jpi,jpj),ftot_si(jpi,jpj),ftot_fe(jpi,jpj), & |
---|
| 351 | fflx_n(jpi,jpj),fflx_si(jpi,jpj),fflx_fe(jpi,jpj), & |
---|
| 352 | fifd_n(jpi,jpj),fifd_si(jpi,jpj),fifd_fe(jpi,jpj), & |
---|
| 353 | fofd_n(jpi,jpj),fofd_si(jpi,jpj),fofd_fe(jpi,jpj), & |
---|
| 354 | # if defined key_roam |
---|
| 355 | ftot_c(jpi,jpj),ftot_a(jpi,jpj),ftot_o2(jpi,jpj), & |
---|
| 356 | fflx_c(jpi,jpj),fflx_a(jpi,jpj),fflx_o2(jpi,jpj), & |
---|
[8023] | 357 | ! I don't think fifd_a, fifd_o2, fofd_a or fofd_o2 are used - marc 11/5/17 |
---|
| 358 | ! fifd_c(jpi,jpj),fifd_a(jpi,jpj),fifd_o2(jpi,jpj), & |
---|
| 359 | ! fofd_c(jpi,jpj),fofd_a(jpi,jpj),fofd_o2(jpi,jpj), & |
---|
| 360 | fifd_c(jpi,jpj), & |
---|
| 361 | fofd_c(jpi,jpj), & |
---|
[7912] | 362 | # endif |
---|
| 363 | fzmi_i(jpi,jpj),fzmi_o(jpi,jpj),fzme_i(jpi,jpj), & |
---|
| 364 | fzme_o(jpi,jpj), & |
---|
| 365 | ftot_pn(jpi,jpj),ftot_pd(jpi,jpj), & |
---|
| 366 | ftot_zmi(jpi,jpj),ftot_zme(jpi,jpj),ftot_det(jpi,jpj), & |
---|
| 367 | ftot_dtc(jpi,jpj), & |
---|
| 368 | fnit_prod(jpi,jpj),fnit_cons(jpi,jpj), & |
---|
| 369 | fsil_prod(jpi,jpj),fsil_cons(jpi,jpj), & |
---|
[8023] | 370 | # if defined key_roam |
---|
[7938] | 371 | f_xco2a(jpi,jpj), & |
---|
| 372 | f_ph(jpi,jpj),f_pco2w(jpi,jpj),f_h2co3(jpi,jpj), & |
---|
| 373 | f_hco3(jpi,jpj),f_co3(jpi,jpj),f_co2flux(jpi,jpj), & |
---|
| 374 | f_TDIC(jpi,jpj),f_TALK(jpi,jpj),f_dcf(jpi,jpj), & |
---|
| 375 | f_henry(jpi,jpj), & |
---|
| 376 | f_pp0(jpi,jpj), & |
---|
| 377 | f_kw660(jpi,jpj),f_o2flux(jpi,jpj),f_o2sat(jpi,jpj), & |
---|
[7912] | 378 | f_omcal(jpi,jpj),f_omarg(jpi,jpj), & |
---|
[7938] | 379 | f_fco2w(jpi,jpj),f_BetaD(jpi,jpj),f_rhosw(jpi,jpj), & |
---|
| 380 | f_opres(jpi,jpj),f_insitut(jpi,jpj), & |
---|
| 381 | f_pco2atm(jpi,jpj),f_fco2atm(jpi,jpj), & |
---|
| 382 | f_schmidtco2(jpi,jpj),f_kwco2(jpi,jpj),f_K0(jpi,jpj), & |
---|
| 383 | f_co2starair(jpi,jpj),f_dpco2(jpi,jpj), & |
---|
| 384 | f_kwo2(jpi,jpj), & |
---|
| 385 | iters(jpi,jpj), & |
---|
[7912] | 386 | fcomm_resp(jpi,jpj), & |
---|
| 387 | fcar_prod(jpi,jpj),fcar_cons(jpi,jpj), & |
---|
| 388 | foxy_prod(jpi,jpj), foxy_cons(jpi,jpj), & |
---|
| 389 | foxy_anox(jpi,jpj), & |
---|
[7958] | 390 | dms_surf(jpi,jpj), & |
---|
| 391 | dms_andr(jpi,jpj),dms_simo(jpi,jpj), & |
---|
| 392 | dms_aran(jpi,jpj),dms_hall(jpi,jpj), & |
---|
[8023] | 393 | # endif |
---|
[7912] | 394 | f_sbenin_n(jpi,jpj),f_sbenin_fe(jpi,jpj), & |
---|
| 395 | f_sbenin_c(jpi,jpj), & |
---|
| 396 | f_fbenin_n(jpi,jpj),f_fbenin_fe(jpi,jpj), & |
---|
| 397 | f_fbenin_si(jpi,jpj), & |
---|
| 398 | f_fbenin_c(jpi,jpj),f_fbenin_ca(jpi,jpj), & |
---|
| 399 | f_benout_n(jpi,jpj),f_benout_fe(jpi,jpj), & |
---|
| 400 | f_benout_si(jpi,jpj), & |
---|
| 401 | f_benout_c(jpi,jpj),f_benout_ca(jpi,jpj), & |
---|
| 402 | f_benout_lyso_ca(jpi,jpj), & |
---|
| 403 | f_runoff(jpi,jpj),f_riv_n(jpi,jpj),f_riv_si(jpi,jpj), & |
---|
| 404 | f_riv_c(jpi,jpj),f_riv_alk(jpi,jpj), & |
---|
[7996] | 405 | f_riv_loc_n(jpi,jpj),f_riv_loc_si(jpi,jpj), & |
---|
| 406 | f_riv_loc_c(jpi,jpj),f_riv_loc_alk(jpi,jpj), & |
---|
[7912] | 407 | STAT = bio_medusa_alloc) |
---|
| 408 | |
---|
| 409 | !! Check that allocation was successful |
---|
| 410 | IF ( bio_medusa_alloc /= 0 ) THEN |
---|
| 411 | CALL ctl_warn('bio_medusa_alloc: failed to allocate arrays') |
---|
| 412 | END IF |
---|
| 413 | |
---|
| 414 | END FUNCTION bio_medusa_alloc |
---|
| 415 | |
---|
| 416 | #else |
---|
| 417 | !!---------------------------------------------------------------------- |
---|
| 418 | !! Empty module : No MEDUSA |
---|
| 419 | !!---------------------------------------------------------------------- |
---|
| 420 | #endif |
---|
| 421 | |
---|
| 422 | !!====================================================================== |
---|
| 423 | END MODULE bio_medusa_mod |
---|