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Changeset 14789 for NEMO/branches/2021/dev_r13747_HPC-11_mcastril_HPDAonline_DiagGPU/doc/latex/NEMO/subfiles/chap_DIA.tex – NEMO

Ignore:
Timestamp:
2021-05-05T13:18:04+02:00 (3 years ago)
Author:
mcastril
Message:

[2021/HPC-11_mcastril_HPDAonline_DiagGPU] Update externals

Location:
NEMO/branches/2021/dev_r13747_HPC-11_mcastril_HPDAonline_DiagGPU
Files:
3 edited

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  • NEMO/branches/2021/dev_r13747_HPC-11_mcastril_HPDAonline_DiagGPU

    • Property svn:externals

      •  

        old new  
        33^/utils/build/mk@HEAD         mk 
        44^/utils/tools@HEAD            tools 
        5 ^/vendors/AGRIF/dev_r12970_AGRIF_CMEMS      ext/AGRIF 
         5^/vendors/AGRIF/dev@HEAD      ext/AGRIF 
        66^/vendors/FCM@HEAD            ext/FCM 
        77^/vendors/IOIPSL@HEAD         ext/IOIPSL 
         8^/vendors/PPR@HEAD            ext/PPR 
        89 
        910# SETTE 
        10 ^/utils/CI/sette@13559        sette 
         11^/utils/CI/sette@14244        sette 

  • NEMO/branches/2021/dev_r13747_HPC-11_mcastril_HPDAonline_DiagGPU/doc/latex/NEMO/subfiles

    • Property svn:ignore

      •  

        old new  
         1*.aux 
         2*.bbl 
         3*.blg 
         4*.fdb* 
         5*.fls 
         6*.idx 
         7*.ilg 
        18*.ind 
        2 *.ilg 
         9*.lo* 
         10*.out 
         11*.pdf 
         12*.pyg 
         13*.tdo 
         14*.toc 
         15*.xdv 
         16cache* 

  • NEMO/branches/2021/dev_r13747_HPC-11_mcastril_HPDAonline_DiagGPU/doc/latex/NEMO/subfiles/chap_DIA.tex

    r12377 r14789  
    1111%    {\em 3.4} & {\em Gurvan Madec, Rachid Benshila, Andrew Coward } & {\em }  \\ 
    1212%    {\em }      & {\em Christian Ethe, Sebastien Masson } & {\em }  \\ 
    13  
    14 \thispagestyle{plain} 
    1513 
    1614\chaptertoc 
    … …  
    119117\subsection{XIOS: Reading and writing restart file} 
    120118 
    121 XIOS may be used to read single file restart produced by \NEMO. Currently only the variables written to 
    122 file \forcode{numror} can be handled by XIOS. To activate restart reading using XIOS, set \np[=.true. ]{ln_xios_read}{ln\_xios\_read} 
     119XIOS may be used to read single file restart produced by \NEMO. The variables written to 
     120file \forcode{numror} (OCE), \forcode{numrir} (SI3), \forcode{numrtr} (TOP), \forcode{numrsr} (SED) can be handled by XIOS.  
     121To activate restart reading using XIOS, set \np[=.true. ]{ln_xios_read}{ln\_xios\_read} 
    123122in \textit{namelist\_cfg}. This setting will be ignored when multiple restart files are present, and default \NEMO 
    124123functionality will be used for reading. There is no need to change iodef.xml file to use XIOS to read 
    … …  
    142141have to be rebuild before continuing the run. This option aims to reduce number of restart files generated by \NEMO\ only, 
    143142and may be useful when there is a need to change number of processors used to run simulation. 
    144  
    145 If an additional variable must be written to a restart file, the following steps are needed: 
    146 \begin{enumerate} 
    147 \item Add variable name to a list of restart variables (in subroutine \rou{iom\_set\_rst\_vars,} \mdl{iom}) and 
    148 define correct grid for the variable (\forcode{grid_N_3D} - 3D variable, \forcode{grid_N} - 2D variable, \forcode{grid_vector} - 
    149 1D variable, \forcode{grid_scalar} - scalar), 
    150 \item Add variable to the list of fields written by restart.  This can be done either in subroutine 
    151 \rou{iom\_set\_rstw\_core} (\mdl{iom}) or by calling  \rou{iom\_set\_rstw\_active} (\mdl{iom}) with the name of a variable 
    152 as an argument. This convention follows approach for writing restart using iom, where variables are 
    153 written either by \rou{rst\_write} or by calling \rou{iom\_rstput} from individual routines. 
    154 \end{enumerate} 
    155143 
    156144An older versions of XIOS do not support reading functionality. It's recommended to use at least XIOS2@1451. 
    … …  
    676664\end{forlines} 
    677665 
    678 \noindent will give the following file name radical: \ifile{myfile\_ORCA2\_19891231\_freq1d} 
     666\noindent will give the following file name radical: \textit{myfile\_ORCA2\_19891231\_freq1d} 
    679667 
    680668%% ================================================================================================= 
    … …  
    19521940When \np[=.true.]{ln_subbas}{ln\_subbas}, transports and stream function are computed for the Atlantic, Indian, 
    19531941Pacific and Indo-Pacific Oceans (defined north of 30\deg{S}) as well as for the World Ocean. 
    1954 The sub-basin decomposition requires an input file (\ifile{subbasins}) which contains three 2D mask arrays, 
     1942The sub-basin decomposition requires an input file (\textit{subbasins}) which contains three 2D mask arrays, 
    19551943the Indo-Pacific mask been deduced from the sum of the Indian and Pacific mask (\autoref{fig:DIA_mask_subasins}). 
    19561944 
    19571945\begin{listing} 
    1958   \nlst{namptr} 
     1946%  \nlst{namptr} 
    19591947  \caption{\forcode{&namptr}} 
    19601948  \label{lst:namptr} 
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