Opened 18 months ago

Last modified 6 months ago

#2222 new Task

AGRIF-03_jchanut_vert_coord_interp

Reported by: jamesharle Owned by: jamesharle
Priority: low Milestone: IMMERSE 2020
Component: AGRIF Version: trunk
Severity: minor Keywords: AGRIF,
Cc: Review: pending
MP ready?: no
Progress: Development plan for this task is ready. Completion of task AGRIF-01_jchanut_small_jpi_jpj is needed first.

Description (last modified by jchanut)

Action AGRIF-03_jchanut_vert_coord_interp
PI(S) Jérôme Chanut, James Harle

Digest

Developments to nesting (IMMERSE T3.2: Lead Mercator-Ocean , Participants: NERC ) The two-way nesting AGRIF capability will be developed in year 1 to allow each inner nest to use a different vertical coordinate from the model in which it is nested.

Dependencies
Target
Trac Ticket #2222
SVN branch NEMO/branches/2019/dev_r11233_AGRIF-05_jchanut_vert_coord_interp
Previewer(s) Rachid Benshila
Reviewer(s) TBD
Link

'.' => '/nemo/ticket/2222'

Commit History (29)

ChangesetAuthorTimeChangeLog
12186jchanut2019-12-11T15:18:59+01:00

#2222, remove sponge masking

12152jchanut2019-12-10T15:36:47+01:00

#2222: fixes linear vertical interpolation of viscosities

12151jchanut2019-12-10T15:34:58+01:00

#2222: fixes linear vertical interpolation of viscosities

12123jchanut2019-12-09T13:55:34+01:00

Merge devs from #2199 and #2222 in trunk

12120jchanut2019-12-09T12:03:44+01:00

2019 agrif update: #2199 and #2222

12119jchanut2019-12-09T11:55:22+01:00

#2222, remove useless mask checking (and restrict scale factor check at the boundary only until nesting tools are updated in sponge areas). Take into account special values in tracer updates, again, till nesting tools are updated.

12048jchanut2019-12-04T16:32:38+01:00

#2222, add small tolerance for bathymetry matching test; correct U-V parent bathymetry on child grid in the special case of s coord into s coord

11868jchanut2019-11-06T16:43:51+01:00

#2222, 1) Correct sponge mainly for using AGRIF in 2DV domains, 2) Add check of bathymetry consistency

11827jchanut2019-10-29T16:03:36+01:00

#2222, corrections to interpolation within sponge

11802jchanut2019-10-25T17:15:20+02:00

#2222, 1) add linear interpolation in vremap module. 2) Switch remapping of viscosity from polynomial to linear. 3) Move to truly volume weighted averages for parent to child update.

11791jchanut2019-10-25T10:35:15+02:00

#2222, scalar not initialized outside of conditional statement

11769jchanut2019-10-23T12:08:33+02:00

#2222 1) change sponge definition to add time relaxation in addition to Laplacian diffusion (WRF like): Add new parameters in namelist. 2) Reduce sponge width by 1 child grid point to match coarse grid cells.

11760jchanut2019-10-21T21:17:59+02:00

#2222, mistake in previous commit

11741jchanut2019-10-21T12:26:39+02:00

#2222: correct definition of parent vertical grid on the child domain to perform vertical interpolation at boundaries. Use additionnal parent depths and number of levels arrays interpolated on the child grid domain to do so. Correction of vertical interpolation of viscosity remains to be done as well as duplication of changes for passive tracers.

11740jchanut2019-10-21T10:55:02+02:00

#2222, typo in comment

11739jchanut2019-10-21T10:49:30+02:00

#2222, make possible vertical coordinate change with VORTEX (child vertical grid spacing chosen in namelist) + fix to compile VORTEX without key_AGRIF

11625jchanut2019-10-01T15:18:44+02:00

#2222, add initialization to 0 of tracer open boundary data with vertical interpolation + various neutral optimizations

11610jchanut2019-09-27T14:08:17+02:00

#2222, fixes to enable compiling AGRIF with TOP

11607jchanut2019-09-27T11:59:22+02:00

#2222, remove slight unconsistencies in update with or without key_vertical defined

11605jamesharle2019-09-26T21:23:26+02:00

#2222, tidy _wp for some variables. There are small difference in simulations of the AGRIF_DEMO config with Pacific only nest (same vertical grid) with and without key_vertical.

11603jchanut2019-09-26T17:27:43+02:00

#2222, 1) correct time interpolation of barotropic velocities in corners. 2) Clean remapping module and enable remapping several variables at the same time. At this stage, vertical remapping doesn't change VORTEX results with an identical vertical grid ONLY in one way mode and a linearized free surface (within truncature errors).

11590jchanut2019-09-23T18:25:29+02:00

#2222: 1) create remapping module (vremap) and integration of D. Engwirda piecewise polynomial recontruction package (PPR_LIB cpp key). 2) Various bug corrections with key_vertical activated.

11574jchanut2019-09-19T12:08:31+02:00

#2222, import changes from dev_r10973_AGRIF-01_jchanut_small_jpi_jpj (i.e. #2199)

11573jchanut2019-09-19T11:18:03+02:00

#2222, merged with trunk

11570jchanut2019-09-18T19:51:33+02:00

#2222, delete som external properties

11569jchanut2019-09-18T19:30:13+02:00

#2222, useless branch

11566jchanut2019-09-18T17:16:23+02:00

#2222, Start new developing branch for AGRIF vertical interpolation

11243jchanut2019-07-10T14:19:49+02:00

#2222, correct bug in update with key_vertical

11238jchanut2019-07-10T10:26:07+02:00

#2222 AGRIF vertical grid change - Create branch from trunk

Change History (34)

comment:1 Changed 12 months ago by jchanut

In 11238:

#2222 AGRIF vertical grid change - Create branch from trunk

comment:2 Changed 12 months ago by jchanut

In 11243:

#2222, correct bug in update with key_vertical

comment:3 Changed 11 months ago by jamesharle

  • Description modified (diff)

comment:4 Changed 10 months ago by jchanut

  • Description modified (diff)
  • Progress modified (diff)

comment:5 Changed 10 months ago by jchanut

In 11566:

#2222, Start new developing branch for AGRIF vertical interpolation

comment:6 Changed 10 months ago by jchanut

In 11569:

#2222, useless branch

comment:7 Changed 10 months ago by jchanut

In 11570:

#2222, delete som external properties

comment:8 Changed 10 months ago by jchanut

In 11573:

#2222, merged with trunk

comment:9 Changed 10 months ago by jchanut

In 11574:

#2222, import changes from dev_r10973_AGRIF-01_jchanut_small_jpi_jpj (i.e. #2199)

comment:10 Changed 10 months ago by jchanut

In 11590:

#2222: 1) create remapping module (vremap) and integration of D. Engwirda piecewise polynomial recontruction package (PPR_LIB cpp key). 2) Various bug corrections with key_vertical activated.

comment:11 Changed 10 months ago by jchanut

In 11603:

#2222, 1) correct time interpolation of barotropic velocities in corners. 2) Clean remapping module and enable remapping several variables at the same time. At this stage, vertical remapping doesn't change VORTEX results with an identical vertical grid ONLY in one way mode and a linearized free surface (within truncature errors).

comment:12 Changed 10 months ago by jamesharle

In 11605:

#2222, tidy _wp for some variables. There are small difference in
simulations of the AGRIF_DEMO config with Pacific only nest (same
vertical grid) with and without key_vertical.

comment:13 Changed 10 months ago by jchanut

In 11607:

#2222, remove slight unconsistencies in update with or without key_vertical defined

comment:14 Changed 10 months ago by jchanut

In 11610:

#2222, fixes to enable compiling AGRIF with TOP

comment:15 Changed 10 months ago by jchanut

In 11625:

#2222, add initialization to 0 of tracer open boundary data with vertical interpolation + various neutral optimizations

comment:16 Changed 9 months ago by jchanut

In 11739:

#2222, make possible vertical coordinate change with VORTEX (child vertical grid spacing chosen in namelist) + fix to compile VORTEX without key_AGRIF

comment:17 Changed 9 months ago by jchanut

In 11740:

#2222, typo in comment

comment:18 Changed 9 months ago by jchanut

In 11741:

#2222: correct definition of parent vertical grid on the child domain to perform vertical interpolation at boundaries. Use additionnal parent depths and number of levels arrays interpolated on the child grid domain to do so.
Correction of vertical interpolation of viscosity remains to be done as well as duplication of changes for passive tracers.

comment:19 Changed 9 months ago by jchanut

In 11760:

#2222, mistake in previous commit

comment:20 Changed 9 months ago by jchanut

In 11769:

#2222 1) change sponge definition to add time relaxation in addition to Laplacian diffusion (WRF like): Add new parameters in namelist.
2) Reduce sponge width by 1 child grid point to match coarse grid cells.

comment:21 Changed 9 months ago by jchanut

In 11791:

#2222, scalar not initialized outside of conditional statement

comment:22 Changed 9 months ago by jchanut

In 11802:

#2222, 1) add linear interpolation in vremap module.
2) Switch remapping of viscosity from polynomial to linear.
3) Move to truly volume weighted averages for parent to child update.

comment:23 Changed 9 months ago by jchanut

In 11827:

#2222, corrections to interpolation within sponge

comment:24 Changed 8 months ago by jchanut

In 11868:

#2222, 1) Correct sponge mainly for using AGRIF in 2DV domains, 2) Add check of bathymetry consistency

comment:25 Changed 7 months ago by jchanut

In 12048:

#2222, add small tolerance for bathymetry matching test; correct U-V parent bathymetry on child grid in the special case of s coord into s coord

comment:26 Changed 7 months ago by jchanut

In 12119:

#2222, remove useless mask checking (and restrict scale factor check at the boundary only until nesting tools are updated in sponge areas). Take into account special values in tracer updates, again, till nesting tools are updated.

comment:27 Changed 7 months ago by jchanut

In 12120:

2019 agrif update: #2199 and #2222

comment:28 Changed 7 months ago by jchanut

In 12123:

Merge devs from #2199 and #2222 in trunk

comment:29 Changed 7 months ago by jchanut

In 12151:

#2222: fixes linear vertical interpolation of viscosities

comment:30 Changed 7 months ago by jchanut

In 12152:

#2222: fixes linear vertical interpolation of viscosities

comment:31 Changed 7 months ago by jchanut

In 12186:

#2222, remove sponge masking

comment:32 Changed 7 months ago by jchanut

  • Milestone changed from IMMERSE 2019 to IMMERSE 2020

comment:33 Changed 6 months ago by jchanut

  • Review changed from failed to pending

comment:34 Changed 6 months ago by jchanut

  • Description modified (diff)
  • Summary changed from AGRIF-05_jchanut_vert_coord_interp to AGRIF-03_jchanut_vert_coord_interp
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