Timeline
2018-05-04:
- 20:54 Ticket #2081 (time splitting and isf: bugs) created by
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== Context
In the trunk, 3 bugs were found recently with time splitting … - 20:22 Changeset [9554] by
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Correction bug with isf and flux form (mask issue) + change mask used for ubaro output
- 18:25 Changeset [9553] by
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add SPITZ12 into SETTE tests
- 18:02 Changeset [9552] by
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add a new configuration SPITZ12 which is a regional simulation around the Spitzbergen (Svalbard archipelago) which includes tides and sea-ice with open boundaries.
- 16:52 Changeset [9551] by
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Remove tracer horizontal diffusion in test case + correct interfaces interpolation after understanding it is related to ORCA2 edited scale factors
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Tags logs added - 15:59 Changeset [9550] by
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put back key_nosignedzero in cpp keys of orca2. I think it is needed but if not, please feel free of removing it again and in other configurations
- 15:09 Ticket #2079 (pb compiling iom.F90 without key_iomput) closed by
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fixed: Compilation problem is indeed solved.
Thanks
I'm closing the ticket.
- 12:32 Changeset [9549] by
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MOCI 310 - Branch to fix compilation and running when using rigorous optimisation level compiler option.
- 12:23 Changeset [9548] by
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MOCI #3314: creating branch for test suite.
- 12:21 Changeset [9547] by
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test commit
- 07:57 Changeset [9546] by
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dev_merge_2017: add a TKE parameter to control the activation of nn_etau below sea-ice
2018-05-03:
- 18:47 Changeset [9545] by
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Add diagnostics in diawri - revert to old interface interpolation - change default regriding parameters - add linear ramp at startup
- 18:28 Changeset [9544] by
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No need to initialize solar penetration for Offline since qsr is read in file
- 17:48 Changeset [9543] by
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correct the output frequency for agrif nordic
- 17:43 Changeset [9542] by
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avoid problems with some configurations when outputing results
- 17:26 Changeset [9541] by
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move sbc_init above dom_init
- 16:11 user/gm/Namelist_framework edited by
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(diff)
- 14:38 New topic on Tools created by
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[tools][NST] Nesting Tools and Grid Staggering
- 14:28 Changeset [9540] by
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debug the dimension read for sea ice when using BDY
- 11:21 Changeset [9539] by
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dev_merge_2017 : validation of Offline configurations
- 09:02 user/gm/Namelist_framework edited by
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(diff)
2018-05-02:
- 18:41 Ticket #2076 (restart of NEMO web access and services) closed by
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worksforme: So far, all the IT systems have restarted and seem to work well.
- 18:38 Ticket #2077 (xios-1.0 rev703 error in parallel output) closed by
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invalid: Here we do not support XIOS, you must address this to the XIOS team …
- 16:45 Changeset [9538] by
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Same bug fix as in r9473 of the branch - see comment to previous revision
- 16:41 Changeset [9537] by
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Bug fix for key_asminc
WARNING - this fix is applied to revision 9196 of the branch, so the fix at revision 9473 is not included - it will be included in the next revision: this is done so we can use the same version as the operational suite, which at the moment does not contain the fix included in r9473
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Tags 2018 added
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- 09:57 New topic on Skilled created by
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[tides] Tides and more
2018-05-01:
- 21:59 New topic on Jobs created by
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[phd][post-doc] PhD or post-doctoral position in Polar Ocean Modelling with NEMO over Arctic | Closing 31 May 2018
- 13:37 Changeset [9536] by
- 13:22 Changeset [9535] by
- 11:33 Ticket #2080 (bug in z tilde?) created by
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== Context
I think the IF test in line 327 of domvvl.F90 might be wrong. …
- 08:11 user/gm/Namelist_framework edited by
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(diff)
- 08:05 user/gm edited by
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(diff)
2018-04-30:
- 20:38 2018WP/CMCC-02_Stefania Ciliberti_BDYTool edited by
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(diff)
- 20:36 2018WP/CMCC-02_Stefania Ciliberti_BDYTool created by
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New page from template Work Plan Action?
- 20:33 2018WP/CMCC-01_Stefania Ciliberti_BDYModel edited by
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(diff)
- 20:28 2018WP/CMCC-01_Stefania Ciliberti_BDYModel created by
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New page from template Work Plan Action?
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Tags VC added
- 18:46 Changeset [9534] by
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correction on the check of .svn repository as since svn v1.7, .svn repository only available in the root of the working copy. Add print of last changed revision. Check revision at the root of the working copy.
- 18:30 Ticket #2079 (pb compiling iom.F90 without key_iomput) created by
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== Context
Trying to run a configuration with 2 AGRIFS zooms, I get some …
- 17:54 Changeset [9533] by
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Branch 2017/dev_merge_2017. Cosmetic changes to ORCA2_LIM3PISCES namelist_cfg to remove empty namelist blocks and bring a few comments into line with reference namelist. This seems to be the best solution for keeping cfg namelists with minimal content whilst making a side by side comparison with the reference namelist meaningful and useful
- 17:00 Changeset [9532] by
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dev_merge_2017: end of the renaming MLE
- 16:59 Changeset [9531] by
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dev_merge_2017: rename traadv_mle.F90 & namtra_adv_mle as tramle.F90 & namtra_mle, resp.
- 16:54 Changeset [9530] by
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ztilde update: add COMODO Internal wave test case
- 16:38 Changeset [9529] by
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ztilde stability update
- 16:17 user/flavoni/TD_mod-num created by
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- 15:39 Changeset [9528] by
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dev_merge_2017: add to new vorticity scheme (EET= EEN using e3t instead of e3f, and ENT= energy conserving at T-point). NB: not used in ref config.
- 13:10 Changeset [9527] by
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dev_merge_2017: NO selection for lateral momentum boundary condition
- 12:22 Changeset [9526] by
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dev_merge_2017: rename ln_…NONE as ln_…OFF (CONFIG, OPA_SRC, TOP_SRC) ; agrif zoom now only in AGRIF_NORDIC configuration
2018-04-29:
- 23:05 Changeset [9525] by
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change sette so that GYRE configuration runs and report is readable
2018-04-27:
- 19:41 Changeset [9524] by
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correct sas_biper namelists
- 19:39 Changeset [9523] by
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fix to OBS to deal with a change in the halo at the wrap points (Dan Lea)
- 18:52 Changeset [9522] by
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debug test cases
- 18:46 Changeset [9521] by
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correct lock_exchange namelists
- 18:43 Changeset [9520] by
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correct overflow namelists
- 18:41 Changeset [9519] by
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correct vortex namelists
- 17:59 Changeset [9518] by
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update sette tests so that all configurations are tested and the report includes the test cases if any
- 17:11 Changeset [9517] by
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small corrections to make SETTE work
- 16:46 Changeset [9516] by
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#2075 - dev_merge_2017: CONFIG:correct the namelist_top_cfg + activate ln_traldf_msc in ORCA2 and NORDIC
- 14:56 Changeset [9515] by
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Do not use halos in area calculations.
- 14:49 Changeset [9514] by
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fix namelists one more time for agrif
- 14:30 Changeset [9513] by
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Add option to detect and remove subglacial lake (do not affect closed sea option)
- 14:08 user/gm/Namelist_framework edited by
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(diff)
- 13:06 Changeset [9512] by
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Correct lbc_lnk call and fix initialisation bugs in diaptr.
- 12:04 Changeset [9511] by
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fix namelists of agrif_nordic
- 11:55 Changeset [9510] by
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fix restartability with SAS module =⇒ SAS_BIPER is now restartable
- 11:21 Changeset [9509] by
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SASBIPER test case formally introduced in sette tests (for now restartability fails with key_agrif and is ok without)
- 11:08 Changeset [9508] by
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add forgotten key_agrif
- 10:11 Changeset [9507] by
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add comments in SETTE for running AGRIF_NORDIC
2018-04-26:
- 19:51 user/gm/Namelist_framework edited by
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(diff)
- 16:54 Changeset [9506] by
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for some mpp decomposition (typically 8x4) agrif failed at running because some barotropic fields needed to be initialized (ub2_b etc) for the 1st interpolation and update. These fields are now set to 0 in dynspg_ts
- 12:24 Changeset [9505] by
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make sure to use the right iodef.xml and not the one defined in agrif
- 12:18 Ticket #2078 (cn_dir corrupts AGRIF input filenames) created by
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== Context
Input files (forcing etc.) cannot be found if cn_dir differs …
- 10:29 user/gm edited by
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(diff)
- 09:55 user/gm/Namelist_framework edited by
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(diff)
- 09:36 user/gm/Namelist_framework created by
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2018-04-25:
- 17:41 Changeset [9504] by
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Branch 2017/dev_merge_2017. Cosmetic changes to namelists to restore alignment between reference and configuration namelists. Done for ORCA2_LIM3_PISCES pending a decision on whether or not to do the rest.
- 16:29 Ticket #2077 (xios-1.0 rev703 error in parallel output) created by
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== Context
On a linux cluster, and compiling with gcc, using one_file in …
- 16:27 Changeset [9503] by
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Add in missing updates to sbc_ice.F90.
- 10:53 Ticket #2076 (restart of NEMO web access and services) created by
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== Context
Due to electric shutdown, all NEMO web access and services …
- 10:24 Changeset [9502] by
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Ensure numerous diagnostics are bit comparable ond different PE
decompositions.
- 10:18 Changeset [9501] by
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Ensure ALL diagnostics are bit comparable on different PE configurations.
Essentially this involves ensuring that ALL wrap columns in global models
are up to date at the point of writing diagnostics. Without this,
hundreds
of diagnostics feature wrap columns which contain uninitialised
data, the contents of which may vary with PE decomposition. Those are the
detectable ones. In the cases that diagnostics are actually initialised, it's
impossible to detect duff wrap column data w/o manually examining every
diagnostic. That then leads to questions about data integrity
(e.g. if someone daoes a global max or min operation on a field w/o
properly poplulated data they will get incorrect, and not necessarily
noticeable, information!)
Also remove redundant, duplicate computation and iom_put of 3D
diagnostic weiv_masstr.
2018-04-23:
- 16:40 Changeset [9500] by
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branches/UKMO/dev_merge_2017_CICE_interface : recommit science changes.
- 16:39 Changeset [9499] by
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branches/UKMO/dev_merge_2017_CICE_interface : clear SVN keywords.
- 16:38 Changeset [9498] by
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branches/UKMO/dev_merge_2017_CICE_interface : revert changes so that I can clear SVN keywords first.
- 16:37 Changeset [9497] by
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branches/UKMO/dev_merge_2017_restart_datestamp_GO6_mixing : recommit science changes.
- 16:36 Changeset [9496] by
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UKMO/branches/dev_merge_2017_restart_datestamp_GO6_mixing : clear SVN keywords.
- 16:34 Changeset [9495] by
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branches/UKMO/dev_merge_2017_restart_datestamp_GO6_mixing : revert previous change so I can remove SVN keywords first.
- 16:10 Changeset [9494] by
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Local changes to CICE interface code.
- 16:09 Changeset [9493] by
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- Datestamp restart files.
- Add extra mixing options.
- Add vertically interpolated MLD diagnostics.
- 15:52 Changeset [9492] by
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Temporary UKMO branch of dev_merge_2017 to implement datestamping of restart files and extra mixing options.
- 11:46 Changeset [9491] by
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Temporary branch of dev_merge_2017 to implement updates to CICE interface.
- 10:44 Changeset [9490] by
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#2075 - dev_merge_2017: scale-aware setting of lateral viscous and diffusive coefficient
2018-04-20:
- 17:24 Changeset [9489] by
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Fix restart reading with XIOS when land points are suppressed
- 10:44 Ticket #2075 (LDF: scale-aware setting of viscous and diffusive coefficient) created by
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== Context
In the current version of the trunk as well as in …
2018-04-19:
- 18:19 Changeset [9488] by
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start with hard coded under-ice relax value
- 17:34 Changeset [9487] by
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create branch
2018-04-17:
- 16:46 Changeset [9486] by
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Minor bugfix to allow code to build w/o key_asminc.
2018-04-14:
- 13:18 Changeset [9485] by
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make sure that the double zoom configuration agrif_nordic is restartable. One must have moved the call to sea ice update at the end of step (after integrate_childgrids)
2018-04-13:
- 22:06 Changeset [9484] by
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simplify namelists
- 20:19 Changeset [9483] by
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add agrif nordic configuration to sette tests. I just noticed that one zoom config is restartable but not the double zoom config…ongoing
- 19:03 Changeset [9482] by
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The configuration Agrif_Nordic is now restartable for any nn_fsbc(Parent) and nn_fsbc(Child). However we do not authorized nn_fsbc(Child) to be larger than 1 because otherwise it breaks the CFL too easily. The simulation would still run but the results would not be satisfactory. I still have to verify this point with the last version of the code
- 16:53 Changeset [9481] by
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Insert full text copy of CECILL V2 license (2006-09-05) as stated in NEMO Consortium Agreement in LICENSE file at root
- 16:40 Changeset [9480] by
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modify SETTE for new MERCATOR cluster ( KARA )
- 16:30 Changeset [9479] by
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Finally found a better solution by combining with CSS rule
- 15:41 Changeset [9478] by
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Should have found the right directive for ASCII code block
- 15:12 Changeset [9477] by
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After modifying Trac configuration, README should be rendered as rst without specifying MIME property
- 13:51 Changeset [9476] by
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Integrate ASCII image as literal block for rendering
- 13:47 Changeset [9475] by
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Add ASCII art image to README
2018-04-12:
- 18:14 Changeset [9474] by
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25h mean bugfix needed for midnight crossover
- 18:12 Changeset [9473] by
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Bug fix for 25h mean, needs reinitialzation of the mean variable at midnight
- 17:29 Changeset [9472] by
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Speed up NOOS transects
- 16:25 2018WP/Shared Actions/Status_dev_merge_2017_branch edited by
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(diff)
- 16:24 2018WP/Shared Actions/Status_dev_merge_2017_branch edited by
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(diff)
- 14:38 New reply on Tools created by
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[SIREN] Segmentation fault - dimensions
2018-04-11:
- 18:04 Changeset [9471] by
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Branch 2017/dev_merge_2017. Add protection around compiler directive in geo2ocean.F90 so that it is only applied for Intel compilers. See ticket #2074
- 16:16 Changeset [9470] by
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Fix docutils typo
- 16:14 user/flavoni edited by
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(diff)
- 16:13 user/flavoni edited by
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(diff)
- 16:11 Changeset [9469] by
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Set MIME type property of README.rst to be processed automatically under Trac
- 16:02 Changeset [9468] by
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Upload Re Structured? Text file (.rst) to test the build of a wiki page by inclusion
- 13:29 Ticket #2074 (Out of bounds error in the extended row form of lbcnfd) closed by
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fixed
- 13:22 Changeset [9467] by
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Branch 2017/dev_merge_2017. Fix for out of bounds error with the extended form of lbcnfd. See ticket #2074
- 13:20 Ticket #2074 (Out of bounds error in the extended row form of lbcnfd) created by
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== Context
Out of bounds error in the extended row form of lbcnfd which …
2018-04-10:
- 16:51 2018WP/Shared Actions/Status_dev_merge_2017_branch edited by
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(diff)
- 11:38 New reply on Skilled created by
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[AGRIF] Intel build (with key_agrif) based on ORCA2_LIM seg faults
2018-04-09:
- 15:45 Changeset [9466] by
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Move again some lines to allow merging with operational branches
2018-04-06:
- 19:57 Changeset [9465] by
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ssh_bkginc deallocated twice
- 18:30 Changeset [9464] by
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New configuration. This is a double agrif zoom in the Nordic Seas from ORCA2 to 1/2deg to 1/6deg. Input files are on ADA for now. This configuration will be better documented soon and will be integrated to sette tests. It will be subject to some changes to solve the remaining issues (restartability for example). At the end it will replace the Agulhas configuration
- 17:50 Changeset [9463] by
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Modify a couple of lines to allow merging with the coupling branch - no science changes
- 17:48 Changeset [9462] by
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Rearrange some lines so that it merges with operational branches
- 16:14 Changeset [9461] by
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bug fixes in iron cycle
- 14:54 Changeset [9460] by
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correct the periodicity in the agrif zoom for sas biper test case
2018-04-05:
- 21:39 New reply on Skilled created by
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[HPC] NEMO on Xeon Phi
- 20:55 Users edited by
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(diff)
2018-04-04:
- 17:27 Changeset [9459] by
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remove unecessary -O1 optimization in geo2ocean for agrif. I tested with -O3 and -O0 on intel proc, and both optimizations seem to work.
- 16:05 Changeset [9458] by
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debug sas biper test case after the last commits
- 15:05 Changeset [9457] by
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repair broken restart for sea-ice (from I do not know when)
- 09:24 Changeset [9456] by
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dev_merge : Bugfix to avoid out-of-bounds in CFC model, see ticket #2073
- 09:21 Changeset [9455] by
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Bugfix to avoid out-of-bounds in CFC model, see ticket #2073
- 09:17 Ticket #2073 (Out of bounds of passive tracers when using PISCES or another SMS model ...) created by
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== Context
NEMO-TOP is designed to be able to simulate SMS models and …
