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19:13 Ticket #1929 (O2L3P cfg. compilation crash with GCC in trcbc.f90) created by nicolasmartin: = Context I gave a try to run ORCA2_LIM3_PISCES configuration for some …
17:26 Changeset [8393] by jgraham: Updated to include 25hourm mldzint diagnostics.
12:38 Changeset [8392] by frrh: Remove redundant MEDUSA cfg namelist namelist_top_MEDUSA_et_al_cfg - this
should be generated by the GUI at job submission time.

Fill in default values for missing variables rn_c in namelist_ref and
rn_fact_lap in namelist_top_MEDUSA_et_al_ref.
11:03 Ticket #1928 (Missing bits of code in triads) created by jchanut: = Context ldf_slp_triad routine (Griffies isopycnal mixing) = Analysis …

2017-07-27:

18:53 Changeset [8391] by jpalmier: JPALM — add a COARE bulk patch for ocean-only run forced by Atm fileds from coupled runs
18:39 Changeset [8390] by jpalmier: create branch for the COARE bulk patch
16:45 Changeset [8389] by frrh: Reinstate original use of fse3t_a, having ensured contents will be initialised
immediately upon allocation evevn if no physical values area available.
15:22 Changeset [8388] by frrh: Delete branch from dummy run tests of GO6 code merge.
15:21 Changeset [8387] by frrh: Delete development branch.
14:22 Changeset [8386] by frrh: Avoid passing in the same variable twice to repcmo with conflicting
INTENTS which leads to junk values in coupling fields and crashes
when using -ei.

Apply what I think is the correct solution to use fse3t_n instead
of fse3t_a in passive tracer summary output.
12:52 Changeset [8385] by jamrae: Debugging.
12:27 Changeset [8384] by jamrae: Implemented changes to pass sea ice form drag from CICE to coupler.
12:17 Changeset [8383] by jamrae: New branch created.
12:17 Changeset [8382] by jamrae: Deleted branch created in error.
12:15 Changeset [8381] by jamrae: New branch, a copy of GO6 package branch.
11:10 Working Groups/HPC edited by clevy: (diff)

2017-07-26:

19:11 2017WP/ENHANCE-16_Clement_ICEMODEL edited by clem: (diff)
19:07 Changeset [8380] by clem: correct a bug in bdy, so that amm12 is working ok
18:38 Users edited by nicolasmartin: (diff)
18:24 Developers/Validation/release-3.6rc edited by nicolasmartin: Remove email addresses (diff)
18:11 Changelog edited by nicolasmartin: (diff)
17:59 Changelog edited by nicolasmartin: (diff)
17:39 Changelog edited by nicolasmartin: Reverse order to anti-chronological (diff)
17:35 Changeset [8379] by clem: more cleaning
15:55 Changeset [8378] by clem: some cleaning
15:48 Changeset [8377] by frrh: Prevent attempt to compute meaningless mean values in trcrst when appropriate
time level data is not available. Output "N/A" instead.
I'm not convinced this is a complete solution. fse3t_a may be undefined
when it is used following a restart in which case there's more to do.
15:02 Ticket #1916 (ROBUST 10 Unify MPPINI) closed by lovato: fixed: The development was concluded and approved by reviewer, see wiki …
14:50 Changeset [8376] by clem: to make the reference configuration orca2aghulas work
14:30 Changeset [8375] by acc: Branch 2017/dev_r8126_ROBUST08_no_ghost. Style changes to mppini.F90 following a review by Gurvan (actually a review of branches/2017/dev_r8126_ROBUST10_MPPINI which this branch now supersedes). Cosmetic changes only; compiled and SETTE tested with ORCA2LIMPISCES.
13:00 Ticket Guidelines/Included edited by nemo: (diff)

2017-07-25:

19:48 Changeset [8374] by clem: complete previous commit
19:45 Ticket #1927 (Name pattern of icebergs restarts doesn't follow usual NEMO conventions) created by nicolasmartin: == Context & analysis Trusting script doesn't manage the new type of …
19:44 Changeset [8373] by clem: remove most of wrk_alloc
18:58 Changeset [8372] by jpalmier: JPALM — debug switch TOP module call order ; remove trc2d and trc3d from MEDUSA (obsolete); rm trcrst_medusa (obsolete)
17:41 Changeset [8371] by clem: minor updates
17:14 Changeset [8370] by clem: put limthd_da into the same loop as the other thermodynamics routines
16:38 Changeset [8369] by clem: STEP4 (4): put all thermodynamics in 1D (limitd_th OK)
11:02 2017WP/ENHANCE-05_Gurvan-RK3 edited by nicolasmartin: (diff)
10:45 Scientific Advisory Board/Agenda/2017-06-27 edited by clevy: (diff)
10:37 CM-DevCom_2017.pptx attached to Scientific Advisory Board/Agenda/2017-06-27 by clevy
10:34 2017-07-24_arguments-open-NDS.docx attached to Scientific Advisory Board/Agenda/2017-06-27 by clevy
10:07 2017WP/ENHANCE-05_Gurvan-RK3 edited by gm: (diff)
09:53 Changeset [8368] by lovato: 3.6_stable: set atm_co2 array allocation as in trunk (missing from r8026)
09:43 DevCommJune2017_HPC_short_version.pptx attached to Scientific Advisory Board/Agenda/2017-06-27 by clevy

2017-07-24:

16:31 2017WP/ENHANCE-05_Gurvan-RK3 edited by nicolasmartin: (diff)
16:25 2017WP/ENHANCE-05_Gurvan-RK3 edited by gm: (diff)
16:13 New topic on Interfaces created by guihou: [IO] Access to NEMO outputs
15:53 Changeset [8367] by gm: #1918 (ENHANCE-17): PART 1.1 - create NEMO/RK3_SRC as a copy of NEMO/OPA_SRC + SETTE changes associated with HPC09
15:26 Ticket #1751 (SIMPLIF-6: Aerobulk package) closed by gm: fixed: This development has been completed and incorporated to the trunk last …
14:33 2017WP/ENHANCE-14_Jerome_SAL edited by cbricaud: (diff)
14:27 Changeset [8366] by cbricaud: update doc with SAL capacity
11:31 Changeset [8365] by frrh: Apply CORRECT intent to fields previously prescribed as OUT.

These should be INOUT fields because they are initialised to
zero prior to calls to the offending routines. The application
of OUT effectively renders them undefined unless ALL elements
are explicitily set in the relevant subroutines, which they
are not.

It so happens that Cray (and no doubt other compilers) are quite
unfussy about this, but when explicitly useing preset Na Ns?, things
go badly wrong. Further use of the incorrect intent, while it
may work in virtually all practical circumstances, is not truly
portable!
11:04 Changeset [8364] by frrh: Fixes to ensure variables are properly initialised, code is portable and
is usable with preset Na Ns?.
09:59 Changeset [8363] by cbricaud: commit change for in 2017WP/ENHANCE-14_Jerome_SAL branch ; see ticket #1926
09:51 Ticket #1926 (ENHANCE14 dev_r8329_ENHANCE14_SAL branch development) created by cbricaud: = Context implement SAL in NEMO = Implementation 2017 work plan: …
09:50 2017WP/ENHANCE-14_Jerome_SAL edited by cbricaud: (diff)
08:24 Changeset [8362] by cbricaud: creat branche for ENHANCE14 SAL task

2017-07-23:

12:51 Changeset [8361] by clem: first step toward full 1D for limitd_th

2017-07-21:

17:59 Changeset [8360] by clem: correct a bug introduced at r8327 ⇒ repro/restart + simplify again
17:56 Changeset [8359] by dford: Changes for running with a variable number of passive tracers.
15:27 Scientific Advisory Board/Agenda/2017-06-27 edited by clevy: (diff)
15:24 NDC_June17_SIWG.pdf attached to Scientific Advisory Board/Agenda/2017-06-27 by clevy
15:23 Changeset [8358] by dford: Remove svn keywords.
15:21 Changeset [8357] by dford: Branch to allow passive tracers to be used in FOAM suite.
12:58 Scientific Advisory Board/Agenda/2017-06-27 edited by clevy: (diff)
12:36 2017WP/CONFIGMAN-1-Julien_improvment edited by jpaul: (diff)
11:38 2017WP/CONFIGMAN-3-Julien_runoff edited by jpaul: (diff)
11:25 Scientific Advisory Board/Agenda/2017-06-27 edited by clevy: (diff)
11:01 DevCommJune2017_WG_PME_MJB.pptx attached to Scientific Advisory Board/Agenda/2017-06-27 by clevy
11:00 NDS_Teams_Working_Groups_MJB.ppt attached to Scientific Advisory Board/Agenda/2017-06-27 by clevy
10:48 2017WP/CONFIGMAN-2-Julien_tide_OB_forcing edited by jpaul: (diff)
10:19 2017WP/CONFIGMAN-3-Julien_runoff edited by jpaul: (diff)
10:17 2017WP/CONFIGMAN-2-Julien_tide_OB_forcing edited by jpaul: (diff)
10:14 2017WP/CONFIGMAN-1-Julien_improvment edited by jpaul: (diff)

2017-07-20:

17:29 Scientific Advisory Board/Agenda/2017-06-27 edited by clevy: (diff)
17:28 Scientific Advisory Board/Agenda/2017-06-27 edited by clevy: (diff)
17:14 Scientific Advisory Board/Agenda/2017-06-27 edited by clevy: (diff)
16:53 Scientific Advisory Board/Agenda/2017-06-27 edited by clevy: rgu (diff)
16:50 New reply on Tools created by jpaul: [SIREN] Create boundary for 3D variables
16:02 Scientific Advisory Board/Agenda/2017-06-27 edited by clevy: (diff)
15:39 Changeset [8356] by davestorkey: UKMO/dev_r5518_GO6_package branch: merge in changes from rev 6917 to 6959 of the 3.6_stable branch.
15:32 Scientific Advisory Board/Agenda/2017-06-27 edited by clevy: (diff)
14:55 intro_slide4.jpg attached to Scientific Advisory Board/Agenda/2017-06-27 by clevy
14:55 Intro_slide2.jpg attached to Scientific Advisory Board/Agenda/2017-06-27 by clevy
14:51 Ideas for 2018WP.pptx attached to Scientific Advisory Board/Agenda/2017-06-27 by clevy
14:51 2017WPstatus June2017.pptx attached to Scientific Advisory Board/Agenda/2017-06-27 by clevy
14:51 Intro_CL.pptx attached to Scientific Advisory Board/Agenda/2017-06-27 by clevy
10:20 Changeset [8355] by clem: simplifications

2017-07-19:

16:48 Ticket #1925 (Update TOP modules for CMIP6) closed by lovato: fixed: The required updates of TOP modules in nemo_v3_6_STABLE were done …
16:41 Changeset [8354] by lovato: 3.6_stable: update ORCA2_LIM_CFC_C14b configuration as demonstrator for CFC, C14b, AGE (#1925)
16:41 Changeset [8353] by lovato: 3.6 stable: update TOP modules and shared configuraton files for CMIP6 (#1925)
16:26 Changeset [8352] by jpalmier: jpalm — debug plus add conservation test print statement in debug mode
12:55 Changeset [8351] by jamrae: Debugging.
12:32 Changeset [8350] by jamrae: Added code to pass sea ice roughness length from CICE to the coupler.
11:32 Changeset [8349] by jamrae: Branching from GO6 package branch in an attempt to avoid conflicts.
10:06 Changeset [8348] by jamrae: Moved call to cice2nemo for roughness length, to try to avoid conflicts.

2017-07-18:

18:36 Ticket Guidelines/Included edited by nemo: (diff)
18:14 Ticket Guidelines/New Ticket Summary edited by nemo: (diff)
18:09 Ticket Guidelines/Modify Ticket Summary edited by nemo: (diff)
17:53 Ticket #1925 (Update TOP modules for CMIP6) created by lovato: = Context In the framework of CMIP6 project, TOP modules for CFC and …
16:21 Changeset [8347] by jamrae: Added code to pass sea ice roughness length from CICE to the coupler.
14:21 Changeset [8346] by jamrae: New branch created.

2017-07-17:

19:43 Changeset [8345] by jpalmier: jpalm — swich back passive tracer module calling order
19:37 Changeset [8344] by jpalmier: jpalm — split trcbio_medusa and clean debug printing-flush in common TOP modules
19:04 Changeset [8343] by jpalmier: Create branch to clean trcbio_MEDUSA and Clean TOP — GMED tickets 339 and 340
17:02 Ticket #1924 (exit value for makenemo) created by rblod: = Context When the build fails, makenemo returns an exit code with the …
12:18 Ticket #1923 (Sea ice form drag) created by jamrae: = Context Currently the UKMO coupled atmosphere-ocean-ice model uses …

2017-07-15:

17:27 Changeset [8342] by clem: simplify the code
13:00 Changeset [8341] by clem: correct the heat conservation (all fine except limthd_da for a reason I do not understand)

2017-07-14:

17:46 Changeset [8340] by marc: Further clearance of keywords
17:30 Changeset [8339] by marc: Remove the keywords from trcnam.F90
16:25 Changeset [8338] by marc: Taking the latest version of trcnam.F90 from nemo_v3_6_STABLE branch
10:39 Changeset [8337] by timgraham: Deleting branch as this has been fixed in the package branch
10:37 Changeset [8336] by timgraham: Deleting branch as it's now included in the package branch
10:36 Changeset [8335] by timgraham: Deleting branch as it's now in package branch
10:36 Changeset [8334] by timgraham: Deleting branch as it is now in package branch
10:14 Changeset [8333] by timgraham: GMED ticket #336 - fix for bug in Asselin filter trend when TOP is enabled

2017-07-13:

23:08 Ticket #1922 (Uninitialized variable in sbcapr.F90) created by mdunphy: = Context If ln_apr_dyn is false, then we do not call sbc_apr and we do …
19:39 Changeset [8332] by clem: 1D fields need also to be calculated at the boundaries otherwise a lbc_lnk is missing
19:17 Changeset [8331] by clem: correct a bug introduced at r8324
16:36 Changeset [8330] by frrh: Reinstate missing key_debug_medusa clause which got de-selected during manual
conflict resolution
16:15 Ticket #1921 (lines over 132) closed by rblod: fixed
16:14 Changeset [8329] by rblod: Lines over 132 see ticket #1921
16:14 Ticket #1921 (lines over 132) created by rblod: = Context Compilation fails = Analysis Lines over 132 in the …
13:33 Ticket #1920 (default config in makenemo) closed by rblod: fixed
13:32 Changeset [8328] by rblod: Fix default config in makenemo see ticket #1929
13:32 Ticket #1920 (default config in makenemo) created by rblod: = Context Try to create a new config fails to create a new …
11:29 Changeset [8327] by clem: STEP4 (3): put all thermodynamics in 1D (limthd_da OK)

2017-07-12:

17:52 Changeset [8326] by clem: STEP4 (2): put all thermodynamics in 1D (limthd_dh & limthd_sal OK)
16:51 Changeset [8325] by clem: STEP4 (1): put all thermodynamics in 1D
15:36 Changeset [8324] by clem: STEP3 (2): clean separation between sea-ice and ocean
12:31 Changeset [8323] by marc: Changing four parameters in OPA_SRC/TRD/trd_oce.F90
01:23 Changeset [8322] by clem: change slightly the call to before fields so it more adequate
01:08 2017WP/ENHANCE-16_Clement_ICEMODEL edited by clem: (diff)

2017-07-11:

20:33 Changeset [8321] by clem: STEP3 (1): clean separation between sea-ice and ocean
17:35 Changeset [8320] by marc: GMED ticket #338: Allow trends to be turned on when using MEDUSA
17:00 Changeset [8319] by clem: STEP2 (4): remove obsolete features (change time step for the ice ⇒ remove numit, nstart, nlast, nitrun and create kt_ice which follows kt)
16:58 Changeset [8318] by davestorkey: UKMO/dev_r5518_GO6_package_fix_ATF_trend_bug : merge in changes from parent branch to rev 8308.
14:34 Changeset [8317] by frrh: Merge in required revisions using command:

svn merge -r 6820:6959 \u200bsvn+ssh://forge.ipsl.jussieu.fr/ipsl/forge/projets/nemo/svn/branches/2015/nemo_v3_6_STABLE

followed by running fcm conflicts and resolving a number of issues manually.
14:05 Changeset [8316] by clem: STEP2 (3): remove obsolete features
13:53 Changeset [8315] by frrh: Development branch to deal with merge of v3_6_STABLE revisions
from 6917 to 6959 inclusive into the UKMO GO6-M branch.
13:02 Changeset [8314] by acc: Branch 2017/dev_r8126_ROBUST08_no_ghost. Merge in changes from branches/2017/dev_r8126_ROBUST10_MPPINI to combine mppini and mppini_2 functionalities into a single routine. SETTE-like test performed with ORCA2LIMPISCES using an 8x8 partition with 60 processors to confirm consistency of results when using land suppression. The dev_r8126_ROBUST10_MPPINI branch will not be needed in the 2017 merge if dev_r8126_ROBUST08_no_ghost is included.

2017-07-10:

20:24 Changeset [8313] by clem: STEP2 (2): remove obsolete features
16:56 Changeset [8312] by clem: STEP2 (1): remove obsolete features (ice diffusion)
16:17 Changeset [8311] by clem: reduce number of arrays in agrif (might be the cause of some cryptic agrif errors?)
15:46 Changeset [8310] by andmirek: #1882 works with AGRIF and few small fixes/changes
15:44 Changeset [8309] by timgraham: Modifications to chk_iomput.sh to work with multiple field_def and file_def files as used in the trunk
14:39 Changeset [8308] by timgraham: Changes required to make scalar diagnostics work correctly in XIOS2. Note that a new grid definition is needed in the iodef.xml file as a result of this change
12:19 Ticket #1919 (Variables passed to iom_put with no definition in field_def*.xml files) created by timgraham: = Context I have modified Seb's script …
12:19 Changeset [8307] by clem: step1: remove LIM2 from the code (bis)
12:18 Changeset [8306] by clem: step1: remove LIM2 from the code
11:33 Changeset [8305] by davestorkey: 3.6_stable: fix for bug in Asselin filter trend diagnostic. See comment on ticket #1877.
11:12 Changeset [8304] by davestorkey: UKMO dev_r5518_GO6_package_fix_ATF_trend_bug branch. Implement bug fix.
10:56 Changeset [8303] by davestorkey: UKMO GO6_package branch. Copy for fix to Asselin filter trend diagnostic.
10:36 Changeset [8302] by timgraham: Minor fix for GMED ticket 321 (halo update after reading runoff from file in forced mode)
10:28 Changeset [8301] by andmirek: no scalar domain value in output file

2017-07-08:

17:26 Changeset [8300] by glong: Changed diagnostics to calculate the contributions by taking after-before before going into the specific numerical scheme for the model.

2017-07-07:

18:16 2017WP/ENHANCE-16_Clement_ICEMODEL edited by clem: (diff)
18:09 2017WP/ENHANCE-16_Clement_ICEMODEL edited by clem: (diff)
17:33 Changeset [8299] by andmirek: #1882 no need to define context in iodef.xml
14:25 Changeset [8298] by timgraham: Changes to use a real scalar grid in XIOS2 (GMED ticket 334)
12:13 Changeset [8297] by andmirek: #1882 New way of defining what is in restart file
09:56 Changeset [8296] by timgraham: Branch for GMED ticket 334 to correct scalar variable output in GO6
09:31 Changeset [8295] by andmirek: fix restart variable definition: see change 8293

2017-07-06:

18:47 2017WP/ENHANCE-16_Clement_ICEMODEL edited by clem: (diff)
18:09 Changeset [8294] by clem: add one output for sea ice
17:29 Changeset [8293] by andmirek: #1881: Add 2 missing variables in restart.
11:51 Changeset [8292] by clem: also correct sette.sh
11:49 Changeset [8291] by clem: correct last commit changes. This is the start version for the modifications of the ice model. All sette tests passed except restartability for agrif and sas (though sas_biper is restartable). Configurations CREG, SPITZ, FER & SASBIPER are running.
10:42 Ticket #1733 (Initialization of av*_k in tke) closed by emanuelaclementi: fixed: fixed bug for Initialization of av*_k in tke
10:40 Changeset [8290] by emanuelaclementi: #1733 bug fixed for Initialization of av*_k in tke
10:17 Changeset [8289] by clem: correct outputs
09:48 Changeset [8288] by clem: correct a bug on agrif following #8287
09:44 Changeset [8287] by clem: correct a bug in agrif_opa_interp.F90 (unmask some operations)
08:48 Changeset [8286] by vancop: 1e20 as missing value
08:40 Changeset [8285] by vancop: Move diagnostics within limrhg to be AGRIF-compliant

2017-07-05:

20:34 2017WP/ROBUST-12_System Team-Trunk-Validation/Results edited by clem: (diff)
20:29 Changeset [8284] by clem: make almost all sette tests pass except agrif restart and sas for some reason (although sas_biper is restartable)
20:26 2017WP/ROBUST-12_System Team-Trunk-Validation/Results edited by clem: (diff)
15:51 Changeset [8283] by andmirek: changes for coupled configuration
15:46 Changeset [8282] by clem: solve issues with adding/deleting keys for all the keys
15:45 Changeset [8281] by clem: solve issues with adding/deleting keys for all the keys
10:28 Changeset [8280] by timgraham: 331: Merge of MEDUSA stable branch and HadGEM3 coupling branches into GO6 package branch.

2017-07-04:

17:46 Changeset [8279] by mocavero: Implementation of OMP coarse-grained parallelization on ZDF new package
17:01 Changeset [8278] by frrh: Updates to stop/error/abort controls following TG's review.
16:22 Changeset [8277] by vancop: fix on meltwater #2
15:35 Changeset [8276] by andmirek: ticket #1914 fix restart read with XIOS when ln_restart is false
14:50 Changeset [8275] by vancop: bug on surface melt water
13:50 Changeset [8274] by clem: make SASBIPER restartable by changing from non-linear to linear free surface
12:56 Changeset [8273] by jwhile: Minor fixes
11:18 Changeset [8272] by clem: update following r8270 & r8271
09:34 Changeset [8271] by vancop: missing value sign
09:32 Changeset [8270] by vancop: final SIMIP output commit
06:32 2017WP/ENHANCE-17_Gurvan_MCO edited by gm: (diff)

2017-07-03:

17:39 Changeset [8269] by andmirek: fix restart read with XIOS whne ln_restart is false
17:01 Changeset [8268] by clem: commit bug fixes, so that all sette tests passed (except SAS as usual)
16:12 Changeset [8267] by gm: #1918 - ENHANCE-17 Action: addition of a Multi-Column Ocean (MCO)scheme below sea-ice
16:10 Ticket #1918 (ENHANCE-17(2017WP) — Multi-Column Ocean scheme (MCO)) created by gm: = Context Introduction of the Multi-Column Ocean scheme (MCO) developed …
16:06 2017WP/ENHANCE-17_Gurvan_MCO edited by gm: (diff)
15:58 2017WP/ENHANCE-17_Gurvan_MCO edited by gm: (diff)
15:48 Users edited by nicolasmartin: (diff)
15:37 Developers/Validation/release-3.6rc created by nicolasmartin
14:38 2017WP/ENHANCE-17_Gurvan_MCO created by nicolasmartin: New page from template Work Plan Action?
12:17 Changeset [8266] by clem: update outputs following simip requirements

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