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2017-08-29:

18:20 Changeset [8472] by jpalmier: JPALM — #1933 — typo error
18:12 Changeset [8471] by jpalmier: JPALM — #1933 — add and correct passive tracer trends - needs improvements and testing
16:18 Changeset [8470] by jpalmier: JPALM — 29-08-2017 — trends bug fix TOT, ZDF, ZDP

2017-08-28:

16:42 Changeset [8469] by flavoni: #1936: add missing BATCH file
16:36 Ticket #1936 (missing test in SETTE for SAS restart_ice files) closed by flavoni: fixed
16:32 Changeset [8468] by flavoni: #1936: add in sette_rpt.sh difference of SAS restart_ice files
16:28 Ticket #1936 (missing test in SETTE for SAS restart_ice files) created by flavoni: = Analysis For developers : In SETTE tests is missing a test to evaluate …

2017-08-25:

18:56 Changeset [8467] by jpalmier: JPALM — 25-08-2017 — improve trdtrc debug print statements
16:10 Changeset [8466] by dford: Set QC value so fill values don't get assimilated.
10:47 New topic on Forks created by pderian: [Dev] NEMO + Docker for easy set-up
10:36 Ticket #1934 (Bug in diawri.F90:dia_wri() for kinetic energy (eken)) closed by timgraham: fixed: Fixed at r8464 of nemo_v3_6_stable and r8465 in the trunk along with …
10:35 Ticket #1935 (Kinetic Energy calculation is wrong) closed by timgraham: fixed: Fixed at r8464 of nemo_v3_6_stable and r8465 in the trunk
10:34 Changeset [8465] by timgraham: #1934 and #1935 - correct calculation of KE in diawri.F90
10:31 Changeset [8464] by timgraham: #1934 and #1935 - correct KE calculation in diawri.F90

2017-08-24:

19:05 Changeset [8463] by jpalmier: JPALM - trdtrc - fixes, update field_def
16:35 Ticket #1935 (Kinetic Energy calculation is wrong) created by timgraham: = Context The calculation of KE in diawri.F90 is not correct. Also note …
15:51 Ticket #1934 (Bug in diawri.F90:dia_wri() for kinetic energy (eken)) created by pderian: = Context Experienced "Segmentation fault - invalid memory reference" …
13:02 Changeset [8462] by dford: Mask land if initialising pCO2/fCO2.

2017-08-23:

18:52 Changeset [8461] by jpalmier: correct trdtrc ticket #1933
18:43 Ticket #1933 (passive tracers trends) created by jpalmier: = Context Working with the UKMO version of NEMO, i got some …
18:23 Changeset [8460] by jamrae: Moved lines setting up ssnd(jps_fmdice), as they were in the wrong place.
17:53 Changeset [8459] by jamrae: Outputs for debugging.
17:07 Changeset [8458] by jamrae: Write statements for debugging.
15:27 Changeset [8457] by dford: Option to read in a value for atmospheric xCO2.
14:20 Changeset [8456] by dford: Add pCO2/fCO2 assimilation.
12:57 Changeset [8455] by dford: Update getting chlorophyll, pCO2 and fCO2 from MEDUSA.
12:53 Changeset [8454] by dford: Branch to update logchl and fco2 obs operator for use with GO6-MEDUSA.

2017-08-22:

18:54 Changeset [8453] by jpalmier: JPALM —22-08-2017— repair trends for passive tracers
14:36 Changeset [8452] by frrh: Lock files
13:19 Changeset [8451] by jpalmier: create branch to correct the passive tracer trends
11:34 Changeset [8450] by frrh: Test locking processes for prevention of rogue commits.

2017-08-21:

16:33 Changeset [8449] by jamrae: Added some write statements for debugging.
15:06 Changeset [8448] by jamrae: Changes to NEMO coupling for form drag field.
12:01 New topic on Beginner created by wanghaoyun0831: [XIOS] First run nemo XIOS2.0 attribute_map.cpp

2017-08-18:

20:34 user/flavoni/libIGCM_v4.0a edited by nicolasmartin: (diff)
18:16 Changeset [8447] by anaguiar: Merging with the dev_r5518_pcbias_ipc@8446 branch
17:08 Changeset [8446] by anaguiar: More changes to avoid conflict merge
17:01 Changeset [8445] by anaguiar: Further changes to solve conflict merges with package branch
16:35 Changeset [8444] by anaguiar: Changes to avoid merge conflicts with package branch

2017-08-17:

16:24 Changeset [8443] by frrh: Delete defunct development branch
13:39 Changeset [8442] by frrh: Commit changes relating to Met Office GMED ticket 340 for the
tidying of MEDUSA related code and debugging statements in the TOP code.

Only code introduced at revision 8434 of branch
http://fcm3/projects/NEMO.xm/log/branches/NERC/dev_r5518_GO6_split_trcbiomedusa
is included here, all previous revisions of that branch having been dealt with
under GMED ticket 339.
11:13 Changeset [8441] by frrh: Commit changes relating to Met Office GMED ticket 339 for the modularisation of
of trcbio_medusa.F90.

Branch http://fcm3/projects/NEMO.xm/log/branches/NERC/dev_r5518_GO6_split_trcbiomedusa
from revisions 8394 to 8423 inclusive refer.

2017-08-16:

15:21 Ticket #1932 (trabbl not conserving tracers at the north-fold) created by acc: = Context v3.6_STABLE (and probably trunk, though not tested for trunk …
14:47 Changeset [8440] by dford: Add more variables to assimilation background, so it includes all required elements of the background state.
12:18 New reply on Tools created by jchanut: [tools][CDF] Z-coordinate output from s-coordinate grid
09:28 New reply on Beginner created by mlicer: [AGRIF] recipe for target 'lib_cray.f90' failed

2017-08-15:

12:22 Changeset [8439] by dancopsey: Add n_rivers as a parameter.
12:21 Changeset [8438] by dford: Initial implementation of Jozef S's code to do multivariate balancing with ERSEM.
06:27 New topic on Forks created by dessyberlianty: [usp-cfg] Compilation of ORCA2_LIM_PISCES using key_agrif

2017-08-14:

16:33 Changeset [8437] by dancopsey: Put number of rivers into partition definition. Only output final river outflow on processor 1.
15:22 Changeset [8436] by dford: Implement initial version of surface chlorophyll assimilation for MEDUSA.
12:19 Changeset [8435] by isabella: Added changes after review.

2017-08-11:

15:13 New reply on Beginner created by nicolasmartin: [AGRIF] recipe for target 'lib_cray.f90' failed
12:47 Changeset [8434] by jpalmier: JPALM — 11-08-2017 — MEDUSA cleaned and purged
09:37 New reply on Beginner created by mlicer: [AGRIF] recipe for target 'lib_cray.f90' failed

2017-08-10:

17:33 Changeset [8433] by dancopsey: Added partition information for river runoff coupling.
12:16 Changeset [8432] by dford: Clear svn keywords.
12:14 Changeset [8431] by dford: Branch of UKMO ASM code to include logchl balancing for ERSEM.
11:31 Changeset [8430] by dford: Add a couple of declarations which got omitted in previous merge.
10:57 New reply on Beginner created by mlicer: [AGRIF] recipe for target 'lib_cray.f90' failed

2017-08-09:

17:27 Documentation edited by nicolasmartin: (diff)
15:55 Changeset [8429] by frrh: Deleting development branch now that it has been committed to GO6 package branch.
14:56 Changeset [8428] by dford: Add logchl assimilation, with nitrogen balancing for HadOCC.
12:13 Changeset [8427] by timgraham: GMED ticket 341. Fixes found through use of preset Na Ns? to make the code more robust.

2017-08-08:

17:53 Changeset [8426] by clem: last routine names to be changed
17:27 New reply on Beginner created by nicolasmartin: [AGRIF] recipe for target 'lib_cray.f90' failed
16:57 Changeset [8425] by jcastill: Calculate wind velocity relative to currents if needed for flux forcing in shelf seas configuration
16:18 Changeset [8424] by clem: continue naming
16:15 Ticket #1931 (Double entries in SHARED/namelist_ref) closed by flavoni: fixed: fix in revision 8421
16:14 Changeset [8423] by jpalmier: JPALM — 08-08-2017 — add conservation test - correct MEDUSA jn loop
15:58 Changeset [8422] by clem: continue naming
15:50 Changeset [8421] by flavoni: fix ticket #1931 for 3_6_STABLE
14:18 Changeset [8420] by clem: changing names
14:11 Changeset [8419] by jpalmier: JPALM — 08-08-2017 — clean trcbio_medusa split only - running this time
13:19 Changeset [8418] by mattmartin: Updated branch of GO6 package branch to enable averaging the assimilation background file.
13:14 Changeset [8417] by mattmartin: Create a branch for averaging the assimilation background used for background error parameterisations
13:10 Changeset [8416] by jcastill: Add the possibility of using wind velocity relative to currents when using flux forcing in shelf seas configuration
12:54 Changeset [8415] by jcastill: Calculate wind velocity relative to currents if needed for flux forcing in shelf seas configuration
12:48 Changeset [8414] by clem: changing names
10:41 Scientific Advisory Board/Agenda/2017-06-27 edited by clevy: (diff)
10:40 Wave_WG_201706_DevCom.pptx attached to Scientific Advisory Board/Agenda/2017-06-27 by clevy

2017-08-07:

19:05 Changeset [8413] by clem: continue changing names (again)
18:23 Users/Model Interfacing/Inputs Outputs edited by nicolasmartin: (diff)
18:22 Users/Model Interfacing/Inputs Outputs edited by nicolasmartin: (diff)
18:15 New reply on Beginner created by nicolasmartin: [XIOS] Error "xios-1.0/src/node/axis.cpp' -> The bounds array of the axis [ id = 'deptht' , context = 'nemo' ] must be of dimension axis 2 x size"
18:11 Changeset [8412] by jcastill: Minor modification to avoid merging problems
18:09 Changeset [8411] by clem: continue changing names
18:04 Glossary edited by nicolasmartin: (diff)
17:43 Changeset [8410] by clem: correction on the last commit
17:29 Changeset [8409] by clem: change calls in icestp.F90 for advection
16:52 Changeset [8408] by jcastill: Remove the code that does not belong to this branch, and that is already included in the amm15 configuration branch AMM15_v3_6_STABLE_package
16:45 Changeset [8407] by clem: change calls in icestp.F90 for rheology
16:38 Changeset [8406] by dford: Branch to add assimilation of surface ocean colour and fCO2 to GO6-MEDUSA. See GMED ticket 344.
16:03 New topic on Beginner created by larsbuntemeyer: [XIOS] Error "xios-1.0/src/node/axis.cpp' -> The bounds array of the axis [ id = 'deptht' , context = 'nemo' ] must be of dimension axis 2 x size"
15:26 Changeset [8405] by dford: Update trend diagnostics in field_def_ptracer.xml.
15:05 Changeset [8404] by clem: start changing calls in icestp.F90
14:44 Ticket #1931 (Double entries in SHARED/namelist_ref) created by mscheinert: = Context In section &namobs in CONFIG/SHARED/namelist_ref the …
13:44 New reply on Beginner created by mlicer: [AGRIF] recipe for target 'lib_cray.f90' failed

2017-08-04:

16:43 user/nicolasmartin/Bibliography Building edited by nicolasmartin: (diff)
16:40 user/nicolasmartin/Bibliography Building edited by nicolasmartin: (diff)
16:11 user/nicolasmartin/Bibliography Building created by nicolasmartin
16:11 Tag change on user/nicolasmartin/Bibliography Building by nicolasmartin: Tags ADS, Documentation, HAL, bibliography added
15:06 Glossary edited by nicolasmartin: (diff)
14:52 Glossary edited by nicolasmartin: (diff)

2017-08-03:

14:30 New reply on Skilled created by davestorkey: [LBC] Lateral open boundary condition file
12:51 Ticket #1929 (O2L3P cfg. compilation crash with GCC in trcbc.f90) reopened by nicolasmartin
11:34 Ticket #1929 (O2L3P cfg. compilation crash with GCC in trcbc.f90) closed by flavoni: fixed: fix by rachid, see @8328.
10:05 Changeset [8403] by deazer: Add in ROMS WAD option ln_rwd+changes for implicit Bed Friction for ln_wd option
Note no ramp placed on ROMS bed friction yet
CS15mini case added as a Test CASE
at this revision AMM15 with Pure sigma coords barotorpic runs for 4 days without failure
in with ROMS option with 20cm min deoth and 50 vertical levels
Both run for CS15mini
In real domains nothing done on reference level yet so real domains
must have not negative depth points yet.
But a basic test has been done in WAD channel test cases (WAD7)

No changes in Main line source yet. See the MY_SRC sub dir of CS15 and TEST_CASES/WAD
for actual code changes.