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2017-09-14:

17:52 Changeset [8522] by clem

changes in style - part6 - ice diffusion (hope the scheme still converges)

17:42 Changeset [8521] by marc

gmed:#346 Merging branches/NERC/dev_r5518_GO6_MEDUSA_conserv

14:36 Changeset [8520] by mocavero

Bug fix for MPI-only execution

09:15 Ticket #1626 (Add branch to allow sponge layer) closed by timgraham
invalid: This is internal Met Office work and shouldn't be in a ticket here. The …
09:13 Ticket #1319 (2014 Work Plan Met Office Task 10: 25hour Mean Diagnostic) closed by timgraham
fixed: This functionality is now in the trunk
01:27 Ticket #1627 (Testing branch for AMM15) closed by lovato
fixed: The work described in this ticket was done and it has been continued in …
00:55 Ticket #848 (agrif with sea-ice) closed by lovato
fixed: This is a very old activity (about 5 years) and very likely it was worked …
00:40 Ticket #1743 (SST coupling with land/sea mask) closed by lovato
wontfix: Apparently, the coupled atmospheric model is not suffering from this issue …
00:04 Ticket #1456 (2015 CMCC - 4: simplification tasks) closed by lovato
fixed: Changes related to this ticket were included in the code during 2016 Merge …

2017-09-13:

21:24 Users edited by nicolasmartin
(diff)
21:05 Users edited by nicolasmartin
Add RG topic page announcement with colored box by NewsFlashMacro (diff)
19:12 Ticket #1875 (Generation of 'nemo.exe' fails when both 'key_asminc' and 'key_zdftke' are ...) closed by lovato
fixed: The proposed ticket was applied to nemo_v3.4_stable at revision r8519. …
19:09 Changeset [8519] by lovato

3.4_stable: set subroutine tke_avn to public (see #1875)

18:50 Ticket #1159 (NOC new development branch: Loglayer Bottom friction Limiter) closed by lovato
wontfix: The log-layer bottom friction was included in the code around 2012. …
18:46 Changeset [8518] by clem

changes in style - part6 - commits of the day

17:28 Ticket #1726 (HPC-4-Scalability with MPI-OPENMP) closed by mocavero
fixed: The development has been completed even if it was not included in the …
16:32 Ticket #1451 (2015 HPC-2 /MERCATOR-3: OpenMP) closed by cbricaud
fixed
16:32 Ticket #1454 (2015 ROBUST-4 /MERCATOR-7: test NEMO_3.6 and ORCA025/ORCA12) closed by cbricaud
fixed
16:31 Ticket #1809 (merge 2016: merge dev_MERCATOR_2016 and dev_CNRS_2016) closed by cbricaud
fixed
16:30 Ticket #1781 (2016WP/CONFIGMAN-1) closed by cbricaud
fixed
16:25 Ticket #1590 (iceberg (ICB) code can't restart from single (rebuilt) restart file) closed by acc
fixed: Added to merge. Now in 3.6_STABLE branch and trunk
16:20 Ticket #1158 (NOC Development branch: Wetting and Drying) closed by acc
fixed: Very old development branch that has been superseded
15:20 Ticket #1327 (Generalised vertical interpolation in OBS for s-coordinates.) closed by jwhile
fixed: Closing ticket as code committed long ago.
15:19 Ticket #1328 (Bias correcting SST observations in OBS) closed by jwhile
fixed: Ticket closed as code committed long ago.
14:53 Ticket #1617 (BUG in domzgr.F90 when defining the envelop bathymetry (both v3.6 stable & ...) closed by timgraham
fixed: This has been corrected in nemo_v3_6_stable and was fixed in the DOMAINcfg …

2017-09-12:

20:46 Changeset [8517] by clem

changes in style - part6 - one more round

16:36 Ticket #1923 (Sea ice form drag) closed by timgraham
invalid: This is for Met Office local code so shoudn't be in a ticket on shared …

2017-09-08:

21:59 Users edited by nicolasmartin
(diff)
21:56 Users edited by nicolasmartin
(diff)
21:47 Users edited by nicolasmartin
(diff)
19:53 Changeset [8516] by clem

changes in style - part5 - I think I can see the end of the tunnel

18:19 Changeset [8515] by clem

changes in style - part5 - very nearly finished

17:09 Changeset [8514] by clem

changes in style - part5 - almost done

14:29 Changeset [8513] by dford

Protect loop with key_top.

12:45 Ticket #1297 (Minor bug in ORCA2_LIM with Agrif) closed by clevy
wontfix
12:44 Ticket #1569 (Add AGRIF SETTE tests) closed by clevy
fixed
12:43 Ticket #1612 (merge simplification branch onto trunk) closed by clevy
fixed

2017-09-07:

20:08 Changeset [8512] by clem

changes in style - part5 - reaching the end

17:54 Ticket #1762 (makenemo with SAS or OOO) closed by lovato
fixed: The suggested improvement is already available in the trunk while it was …
17:53 Changeset [8511] by lovato

3.6_stable: correct output format for large timestep values in trcbc

17:53 Changeset [8510] by lovato

3.6_stable: add SAS_SRC and OOO_SRC choices in makenemo (#1762)

17:34 Ticket #896 (test dynamical allocation performances) closed by lovato
duplicate: This is quite old issue and more recently it was decided to remove the use …
17:26 Ticket #1674 (New v3.6_STABLE branch for a non intrusive version of the new ...) closed by lovato
fixed: The development was integrated in the NEMO V3.6_STABLE (r6314) and trunk …
17:02 Ticket #1938 (Update to icb_pp.py demonstrator script to take into account all the ...) closed by acc
fixed
17:01 Changeset [8509] by acc

Trunk: Updated icb_pp.py script to process all fields in a trajectory mean file (#1938). Also includes bugfix to trabbl.F90 (#1932)

16:59 Ticket #1938 (Update to icb_pp.py demonstrator script to take into account all the ...) created by acc
)]]= Context The icb_pp.py demonstrator python script …
16:57 Ticket #1647 (GYRE_XIOS config) closed by lovato
fixed: The problem was still in the trunk for GYRE_BFM and GYRE_PISCES …
16:56 Changeset [8508] by lovato

trunk : remove old namelist parameter rn_ahm_0_lap from GYRE configurations (#1647)

16:51 Ticket #1404 (NEMO-wave coupling WG) closed by emanuelaclementi
fixed: Closed. All changes have been included in …
16:37 Ticket #1218 (Diawri and vvl outputting) closed by lovato
fixed: The correction were applied in the code by Andrew Coward (r5127) and the …
16:31 Ticket #1333 (UKMO 2014 workplan task 5 (Kara mixed layer diagnostic)) closed by timgraham
wontfix: This work was not completed and may be revisited at some point but the …
16:30 Ticket #1932 (trabbl not conserving tracers at the north-fold) closed by acc
fixed: Bug fix applied at revision 8507: […] svn ci -m'Branch …
16:29 Ticket #1358 (UKMO workplan 14.12 - Stand Alone Observation operator improvements) closed by timgraham
fixed: This was merged in dev_merge_2015
16:24 Changeset [8507] by acc

Branch 2015/nemo_v3_6_STABLE. Bug fix for #1932 to correct tracer conservation at the north-fold

16:17 Ticket #1350 (dev CNRS-0 --- new version of tranpc (non-penetrative convection) based ...) closed by lovato
fixed: The developments of this ticket are included in the NEMO V3.6_stable …
16:15 Ticket #1348 (dev CNRS-0 --- bulk core: simplification and optimization) closed by lovato
fixed: The changes described in this ticket are included in NEMO V3.6_STABLE.
16:03 Ticket #1332 (UKMO 2014 workplan task 4 (CF-1.5 compliance)) closed by lovato
fixed: The changes described in this ticket were all included in the code of NEMO …
14:12 user/nicolasmartin/Bibliography Building edited by nicolasmartin
(diff)
12:28 Changeset [8506] by clem

changes in style - part5 - continue changing init routines

2017-09-06:

19:02 Changeset [8505] by clem

changes in style - part5 - start changing init routines

17:47 Changeset [8504] by clem

changes in style - part4 - clarify ice advection routines

15:05 Changeset [8503] by jcastill

Print namsbc_flx namelist information in the output (shelf seas configuration)

13:05 Changeset [8502] by jcastill

Bug fix - one variable was calculated using the wrong component

12:56 Changeset [8501] by dford

Add omitted do loop and divide-by-zero check.

12:01 Changeset [8500] by clem

changes in style - part3 - move output into proper files and correct a bug in debug mode

10:33 Changeset [8499] by jcastill

Remove because it was created by mistake

2017-09-05:

19:53 Changeset [8498] by clem

changes in style - part2 -

18:00 Changeset [8497] by dford

Include conversion from moles to grams in carbon to chlorophyll ratio calculation.

15:30 user/nicolasmartin/Bibliography Building edited by nicolasmartin
(diff)
15:03 Changeset [8496] by clem

debug icevar

14:34 2017WP/AGRIF-2_Tim Graham-vertical edited by timgraham
(diff)
14:02 Users/Reference Configurations/ORCA2_LIM3_PISCES edited by clevy
(diff)

2017-09-04:

18:50 Changeset [8495] by dford

Merge in changes from dev_r5518_GO6_package_asm_surf_bgc, and adapt to the updated MEDUSA structure.

15:59 Users/Model Interfacing/Inputs Outputs edited by clevy
(diff)
14:25 Changeset [8494] by dford

New branch off head of GO6 package branch for MEDUSA assimilation changes.

13:10 Users/Model Interfacing/Inputs Outputs edited by clevy
(diff)
13:06 Users/Model Install edited by clevy
(diff)
12:59 New reply on Beginner created by clevy
[XIOS] First run nemo XIOS2.0 'attribute_map.cpp'
12:13 New reply on Interfaces created by clevy
[IO] Access to NEMO outputs
09:48 Changeset [8493] by frrh

Remove defunct development/test branch.

09:46 Changeset [8492] by frrh

Remove defunct development branch.

2017-09-01:

18:15 Changeset [8491] by clem

debug icevar.F90

17:28 Changeset [8490] by jpalmier

JPALM — mld chl — remove quick and dirty hacks

16:55 Changeset [8489] by jpalmier

JPALM — gmed ticket #346 : improve MEDUSA conservation — import BBL bug fix from NEMO ticket #1932 to GO6 branch

16:47 Changeset [8488] by clem

compilation bugs

16:35 Changeset [8487] by jpalmier

JPALM — gmed ticket #346 — branch creation

15:49 Changeset [8486] by clem

changes in style - part1 - (now the code looks better txs to Gurvan's comments)

15:12 Changeset [8485] by dford

Mask logchl increments in the ITF region.

12:17 Changeset [8484] by jamrae

Added write statements for debugging.

12:03 Changeset [8483] by clem

bug fix following #1937

12:02 Changeset [8482] by clem

bug fix following #1937

12:02 Changeset [8481] by clem

bug fix following #1937

12:02 Changeset [8480] by clem

bug fix following #1937

12:01 Ticket #1937 (wrong heat budget of the leads in LIM3) created by clem
This ticket applies to the trunk and different development branches (i.e. …

2017-08-31:

19:44 Changeset [8479] by jpalmier

JPALM — trdtrc — polish field_def_bgc

17:22 Changeset [8478] by jamrae

Added call to cice2nemo for roughness length in cice_sbc_init.

14:41 Changeset [8477] by timgraham

Revert accidental change to step.F90 in last commit

14:33 Changeset [8476] by davestorkey

UKMO/dev_3.6_FVPS : implement FVPS HPG scheme.

14:15 Changeset [8475] by jpalmier

JPALM — trdtrc —add vertical integrated trends

2017-08-30:

15:08 Changeset [8474] by dford

Add fields required for logchl assimilation to restart.

11:42 Ticket #1935 (Kinetic Energy calculation is wrong) closed by timgraham
fixed: Sorry about that. Now fixed at r8473
11:38 Changeset [8473] by timgraham

Corrected fix for #1935 (not using variables that don't exist in nemo_v3_6_stable)

11:23 Ticket #1935 (Kinetic Energy calculation is wrong) reopened by arsouze
It looks like variables r1_e1e2t, e1e2u, e1e2v are not defined in …

2017-08-29:

18:20 Changeset [8472] by jpalmier

JPALM — #1933 — typo error

18:12 Changeset [8471] by jpalmier

JPALM — #1933 — add and correct passive tracer trends - needs improvements and testing

16:18 Changeset [8470] by jpalmier

JPALM — 29-08-2017 — trends bug fix TOT, ZDF, ZDP

2017-08-28:

16:42 Changeset [8469] by flavoni

#1936: add missing BATCH file

16:36 Ticket #1936 (missing test in SETTE for SAS restart_ice files) closed by flavoni
fixed
16:32 Changeset [8468] by flavoni

#1936: add in sette_rpt.sh difference of SAS restart_ice files

16:28 Ticket #1936 (missing test in SETTE for SAS restart_ice files) created by flavoni
= Analysis For developers : In SETTE tests is missing a test to evaluate …

2017-08-25:

18:56 Changeset [8467] by jpalmier

JPALM — 25-08-2017 — improve trdtrc debug print statements

16:10 Changeset [8466] by dford

Set QC value so fill values don't get assimilated.

10:47 New topic on Forks created by pderian
[Dev] NEMO + Docker for easy set-up
10:36 Ticket #1934 (Bug in diawri.F90:dia_wri() for kinetic energy (eken)) closed by timgraham
fixed: Fixed at r8464 of nemo_v3_6_stable and r8465 in the trunk along with …
10:35 Ticket #1935 (Kinetic Energy calculation is wrong) closed by timgraham
fixed: Fixed at r8464 of nemo_v3_6_stable and r8465 in the trunk
10:34 Changeset [8465] by timgraham

#1934 and #1935 - correct calculation of KE in diawri.F90

10:31 Changeset [8464] by timgraham

#1934 and #1935 - correct KE calculation in diawri.F90

2017-08-24:

19:05 Changeset [8463] by jpalmier

JPALM - trdtrc - fixes, update field_def

16:35 Ticket #1935 (Kinetic Energy calculation is wrong) created by timgraham
= Context The calculation of KE in diawri.F90 is not correct. Also note …
15:51 Ticket #1934 (Bug in diawri.F90:dia_wri() for kinetic energy (eken)) created by pderian
= Context Experienced "Segmentation fault - invalid memory reference" …
13:02 Changeset [8462] by dford

Mask land if initialising pCO2/fCO2.

2017-08-23:

18:52 Changeset [8461] by jpalmier

correct trdtrc ticket #1933

18:43 Ticket #1933 (passive tracers trends) created by jpalmier
= Context Working with the UKMO version of NEMO, i got some …
18:23 Changeset [8460] by jamrae

Moved lines setting up ssnd(jps_fmdice), as they were in the wrong place.

17:53 Changeset [8459] by jamrae

Outputs for debugging.

17:07 Changeset [8458] by jamrae

Write statements for debugging.

15:27 Changeset [8457] by dford

Option to read in a value for atmospheric xCO2.

14:20 Changeset [8456] by dford

Add pCO2/fCO2 assimilation.

12:57 Changeset [8455] by dford

Update getting chlorophyll, pCO2 and fCO2 from MEDUSA.

12:53 Changeset [8454] by dford

Branch to update logchl and fco2 obs operator for use with GO6-MEDUSA.

2017-08-22:

18:54 Changeset [8453] by jpalmier

JPALM —22-08-2017— repair trends for passive tracers

14:36 Changeset [8452] by frrh

Lock files

13:19 Changeset [8451] by jpalmier

create branch to correct the passive tracer trends

11:34 Changeset [8450] by frrh

Test locking processes for prevention of rogue commits.

2017-08-21:

16:33 Changeset [8449] by jamrae

Added some write statements for debugging.

15:06 Changeset [8448] by jamrae

Changes to NEMO coupling for form drag field.

12:01 New topic on Beginner created by wanghaoyun0831
[XIOS] First run nemo XIOS2.0 'attribute_map.cpp'

2017-08-18:

20:34 user/flavoni/libIGCM_v4.0a edited by nicolasmartin
(diff)
18:16 Changeset [8447] by anaguiar

Merging with the dev_r5518_pcbias_ipc@8446 branch

17:08 Changeset [8446] by anaguiar

More changes to avoid conflict merge

17:01 Changeset [8445] by anaguiar

Further changes to solve conflict merges with package branch

16:35 Changeset [8444] by anaguiar

Changes to avoid merge conflicts with package branch

2017-08-17:

16:24 Changeset [8443] by frrh

Delete defunct development branch

13:39 Changeset [8442] by frrh

Commit changes relating to Met Office GMED ticket 340 for the
tidying of MEDUSA related code and debugging statements in the TOP code.

Only code introduced at revision 8434 of branch
http://fcm3/projects/NEMO.xm/log/branches/NERC/dev_r5518_GO6_split_trcbiomedusa
is included here, all previous revisions of that branch having been dealt with
under GMED ticket 339.

11:13 Changeset [8441] by frrh

Commit changes relating to Met Office GMED ticket 339 for the modularisation of
of trcbio_medusa.F90.

Branch http://fcm3/projects/NEMO.xm/log/branches/NERC/dev_r5518_GO6_split_trcbiomedusa
from revisions 8394 to 8423 inclusive refer.

2017-08-16:

15:21 Ticket #1932 (trabbl not conserving tracers at the north-fold) created by acc
= Context v3.6_STABLE (and probably trunk, though not tested for trunk …
14:47 Changeset [8440] by dford

Add more variables to assimilation background, so it includes all required elements of the background state.

12:18 New reply on Tools created by jchanut
[CDF-tools] Z-coordinate output from s-coordinate grid
09:28 New reply on Beginner created by mlicer
[ref-cfg] "recipe for target 'lib_cray.f90' failed"

2017-08-15:

12:22 Changeset [8439] by dancopsey

Add n_rivers as a parameter.

12:21 Changeset [8438] by dford

Initial implementation of Jozef S's code to do multivariate balancing with ERSEM.

06:27 New topic on Forks created by dessyberlianty
[usp-cfg] Compilation of ORCA2_LIM_PISCES using key_agrif
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