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2010-11-17:

22:03 Changeset [2404] by smasson: bugfix on chk_iomput.sh
17:18 Changeset [2403] by cetlod: Minor bug correction in PISCES
17:14 Changeset [2402] by cetlod: Update TOP component according to changes related to cross-land advection. see ticket #127
16:28 2011WP/2011Stream2/Dynamic Memory edited by frrh: (diff)
15:14 2010WP/2010from Merge Party To Version3.3 edited by clevy: (diff)
15:13 2010WP/2010from Merge Party To Version3.3 edited by clevy: (diff)
14:16 2010WP/2010from Merge Party To Version3.3 edited by clevy: (diff)
12:14 2010WP/2010from Merge Party To Version3.3 edited by gm: (diff)
12:10 Ticket #435 (wrong index uslpml & vslpml in ldfslp.F90 (v3.2 & v3.3beta)) closed by gm: fixed: done in NEMO v3.3beta, see changetset: 2401
12:09 Changeset [2401] by gm: v3.3beta: #435: bug correction of the slope just below the ML (uslpiml, vslpjml)
11:58 2010WP/2010from Merge Party To Version3.3 edited by clevy: (diff)
10:41 2010WP/2010from Merge Party To Version3.3 edited by gm: (diff)
10:40 Ticket #759 (diaptr (heat & salt transport): rewriting including dynamical allocation + ...) closed by gm: fixed: done in v3.3beta see changeset:2399
10:39 2010WP/2010from Merge Party To Version3.3 edited by gm: (diff)
10:16 Changeset [2400] by gm: v3.3beta: recover the CPP keys in ORCA2-LIM configuration
10:09 Changeset [2399] by gm: v3.3beta: diaptr (poleward heat & salt transports) #759 : rewriting including dynamical allocation + DOCTOR names
10:05 Ticket #759 (diaptr (heat & salt transport): rewriting including dynamical allocation + ...) created by gm: simplify the coding of diaptr : - introduction of 3D arrays, the third …

2010-11-16:

23:24 Changeset [2398] by rblod: Correct compilation error for dynspg
14:03 Changeset [2397] by cbricaud: use stress module variable taum and simplifications for mask variables
11:18 Changeset [2396] by cbricaud: add modifications for atmopheric pressure forcing
08:48 2010WP/2010from Merge Party To Version3.3 edited by gm: (diff)
08:10 2010WP/2010from Merge Party To Version3.3 edited by gm: (diff)
07:35 Ticket #458 (Compute vertical viscosity/diffusion coefficients due to internal tidal ...) closed by gm: fixed: done in v3.3beta
07:11 Ticket #127 (Arrays goout of bounds) closed by gm: fixed: Since v3.1, the diafwb module (now named sbcfwb) already takes into …
06:15 Changeset [2395] by rblod: Add dummy routine zdf_gls_init
05:13 Changeset [2394] by rblod: Allow rebuild compilation
05:11 Changeset [2393] by rblod: Allow agrif compilation broken by div_cla changes

2010-11-15:

22:20 Changeset [2392] by gm: v3.3beta: Cross Land Advection (ticket #127) full rewriting + MPP bug corrections
21:54 Changeset [2391] by gm: v3.3beta: correct ORCA1 support to compile without a predefined config. (ticket #758)
17:52 Changeset [2390] by gm: v3.3beta: rnf set to zero when ln_rnf=F
16:52 Changeset [2389] by smasson: ticket #435, bug fix on uslpml and vslpml
16:25 Ticket #757 (LIM-2 - bulk CLIO bug in surface ice stress (sbcblk_clio.F90)) closed by smasson: fixed: done for NEMO v3.2, see changeset:2388
16:24 Changeset [2388] by smasson: ticket #757, LIM-2 - bulk CLIO bug in surface ice stress
16:19 Ticket #670 (LIM-3: small bug in latent heat of solid precipitation melting) closed by smasson: fixed: done in trunk of v3.2.1, see changeset #2387
16:18 Changeset [2387] by smasson: ticket #670 lim3: small bug in latent heat of solid precipitation melting
14:08 2011WP/2011Stream2/Dynamic Memory edited by trackstand: (diff)
13:13 2011WP/2011Stream2/Dynamic Memory edited by trackstand: (diff)
13:04 2011WP/2011Stream2/Dynamic Memory edited by trackstand: (diff)
12:42 Changeset [2386] by cetlod: minor bug in zdftke : vector operation on surface mixing length ; replace taum(ji,jj) by taum(:,
09:15 Ticket #704 (EVP rheology in LIM2) closed by cbricaud: fixed
09:15 Ticket #632 (weekly forcing files (Mercator contribution for 2009)) closed by cbricaud: fixed
09:14 Ticket #687 (MERCATOR.5 — GLS Vertical scheme) closed by cbricaud: fixed
09:12 Ticket #649 (Read 3D files with fldread.F90 ( like Levitus), Mercator contribution) closed by cbricaud: fixed
09:11 Ticket #703 (GLS Vertical scheme) closed by cbricaud: fixed
09:11 Ticket #706 ("weekly file" option in fldread) closed by cbricaud: fixed
09:05 Ticket #650 (Read 3D files (like Levitus) with fldread.F90) closed by cbricaud: fixed
04:45 Changeset [2385] by rblod: Add parallel compilation with agrif on the beta
04:20 Changeset [2384] by rblod: Modifications to compile agrif correctly(?) in the beta

2010-11-14:

19:31 Ticket #435 (wrong index uslpml & vslpml in ldfslp.F90 (v3.2 & v3.3beta)) reopened by gm: Following discussion with Frederic Dupond, there is a bug in the …

2010-11-13:

16:01 Changeset [2383] by gm: v3.3beta: LIM-3 bug correction ticket #670
14:08 Changeset [2382] by gm: v3.3beta: C1D - bug correction to compile with key_c1d
12:09 Changeset [2381] by gm: v3.3beta - DOC: add ORCA1 in CFG

2010-11-12:

20:31 Changeset [2380] by acc: nemo_v3_3beta. ORCA_R1 settings (step 2, see ticket #758). Introduces key_orca_r1 (46 level default, 75 level if key_orca_r1=75)
15:51 Changeset [2379] by acc: nemo_v3_3beta. First stage of adding ORCA1 support. See ticket #758. Added optional double tanh function for vertical grid
15:47 Ticket #758 (ORCA1 support and alternative vertical levels) created by acc: ORCA1 configuration details are to be added to v3.3beta. ORCA1 is in use …
12:31 Changeset [2378] by cetlod: correct the name of the viscosity coef for GYRE_LOBSTER configuration
11:13 Ticket #663 (OPA modified Leap-Frog Robert-Asselin filter (MLF)) closed by gm: fixed: done and validated in the v3.3 beta
11:12 Ticket #459 (add light penetration following 3 wavebands model (RGB) and the use of ...) closed by gm: fixed: Done in the v3.3 beta see change set Changeset 2376
11:00 Ticket #194 (LIM-2 damping option) closed by gm: fixed: done in v3.3 beta see Changeset [2377] by gm
10:58 Changeset [2377] by gm: v3.3beta: #194 use fldread in limdmp_2, add namice_dmp namelist

2010-11-11:

18:01 Changeset [2376] by gm: v3.3beta: better TKE description, CFG a new Chapter, and correction of Fig references
15:40 2010WP/2010from Merge Party To Version3.3 edited by djlea: (diff)
15:35 2010WP/2010from Merge Party To Version3.3 edited by edblockley: (diff)
15:32 Changeset [2375] by gm: v3.3beta: zdftke namelist simplification associated with an update of DOC
15:20 2010WP/2010from Merge Party To Version3.3 edited by djlea: (diff)
15:05 2010WP/2010from Merge Party To Version3.3 edited by rfurner: (diff)
10:30 Ticket #718 (updates to BDY module) closed by davestorkey: fixed
10:29 2010WP/2010from Merge Party To Version3.3 edited by davestorkey: (diff)
08:43 2010WP/2010from Merge Party To Version3.3 edited by sga: (diff)
08:38 Ticket #631 (proposal to modify behaviour of interpolation on the fly code in fld_read) closed by sga: fixed: To tidy up the loose ends (that I currently know about): To create a …

2010-11-10:

22:45 Changeset [2374] by rblod: Correct fix for obcfla on the trunk
22:45 Changeset [2373] by rblod: Correct fix for obcfla on 3.3 beta
18:14 Changeset [2372] by acc: nemo_v3_3_beta. Minor changes to ensure code associated with key_netcdf4 changes (#755) compiles with key_agrif. See updated wiki/NetCdf4_changes page for details
18:05 user/acc/Net Cdf4_changes edited by acc: (diff)
16:38 Changeset [2371] by acc: nemo_v3_3_beta. Improvement of the Griffies operator code (#680). Some aspects are still undergoing scientific assessment but the code structure is ready for release. Dynamical allocation of the large triad arrays has been introduced to reduce memory when the new operator is not in use.
11:14 2010WP/2010from Merge Party To Version3.3 edited by acc: (diff)
10:20 Developers/SVN_Quick Reference edited by sga: (diff)
10:17 2010WP/2010from Merge Party To Version3.3 edited by sga: (diff)
08:55 2010WP/2010from Merge Party To Version3.3 edited by sga: (diff)
08:48 Changeset [2370] by gm: v3.3beta: ice-ocean stress at kt with VP & EVP (LIM-2 and -3)
08:41 Developers edited by sga: (diff)
07:45 Ticket #757 (LIM-2 - bulk CLIO bug in surface ice stress (sbcblk_clio.F90)) created by gm: In clio bulk formulae, the air-ice stress is deduced from the air-sea …

2010-11-09:

16:54 Changeset [2369] by acc: Reverted ORCA2_LIM/cpp_ORCA2_LIM.fcm back to default set.
16:51 2010WP/2010from Merge Party To Version3.3 edited by clevy: (diff)
16:50 Ticket #755 (Compilation error due to modifications related to NetCDF4 chunking, See ...) closed by acc: fixed: Revised code submitted into revision 2368. A single definition of the …
16:38 Changeset [2368] by acc: nemo_v3_3_beta. Changes to code relating to key_netcdf4 option to provide more robust compilation. See #755 and #754
16:33 2010WP/2010from Merge Party To Version3.3 edited by clevy: (diff)
16:26 2010WP/2010from Merge Party To Version3.3 edited by clevy: (diff)
16:08 2010WP/2010from Merge Party To Version3.3 edited by clevy: (diff)
14:00 Ticket #676 (open an fcm branch) closed by flavoni: fixed
13:54 Changeset [2367] by flavoni: set core BULK formulae by default and changed default forcing files, see ticket #756
12:24 Changeset [2366] by gm: v3.3beta: correct errors in iof : unprotected underscore
12:15 Ticket #756 (change in namelist CORE bulk formulation by default, and change ...) created by flavoni: Update namelist to new tar file ORCA2_LIM_nemo_v3.3.beta.tar. By default …
11:56 Ticket #755 (Compilation error due to modifications related to NetCDF4 chunking, See ...) created by cetlod: The code does not compile anymore ; tests have been done on SX8 and …
10:37 2011WP/2011Stream2/Dynamic Memory created by trackstand
10:35 2011WP/2011Stream2 edited by trackstand: (diff)
10:29 2011WP/2011Stream2 edited by trackstand: (diff)
10:23 2011WP/2011Stream2 edited by trackstand: Added link to new page for discussin of coding approach for dyn. mem. (diff)

2010-11-08:

14:16 user/acc/Net Cdf4_changes edited by acc: (diff)
13:56 user/acc/Net Cdf4_changes edited by acc: (diff)
13:24 Changeset [2365] by acc: nemo_v3_3_beta. Reverted cpp_ORCA2_LIM.fcm to contain default CPP keys. The wrong set was checked in with #754 changes.

2010-11-05:

16:33 user/acc/Net Cdf4_changes edited by acc: (diff)
16:29 user/acc/Net Cdf4_changes edited by acc: (diff)
16:22 Changeset [2364] by acc: Added basic NetCDF4 chunking and compression support (key_netcdf4). See ticket #754
16:18 netcdf4.pdf attached to user/acc/Net Cdf4_changes by acc: key_netcdf4 reference manual pages
16:15 user/acc/Net Cdf4_changes created by acc
16:00 Ticket #754 (Added NetCDF4 chunking and compression support to v3.3beta) created by acc: Support for chunking and compression of all 4D datasets has been added to …
14:11 Changeset [2363] by rblod: Fixes to compile with key_agrif and key_mpp_mpi
12:44 Changeset [2362] by flavoni: updated IGCM00 files for new ORCA2_LIM_nemo_v3.3.beta.tar, see ticket #752
12:41 Changeset [2361] by flavoni: update tar file for nemo version v3_3_beta: ORCA2_LIM.3.3.beta.tar, and updated file for SETTE, see ticket #752
12:40 Changeset [2360] by rblod: Update 1_namelist for agrif configuration
10:28 Changeset [2359] by flavoni: cosmetic changes, see ticket #752

2010-11-04:

19:14 Changeset [2358] by rblod: Changes to be able to compile v3_3_beta with key_agrif,see ticket #753 ; just compilation fixes, I was to scared to try to run AGRIF
19:07 Changeset [2357] by rblod: Adaptation for nec compiler in limrhg.F90,part 2
18:38 Changeset [2356] by rblod: Adaptation for nec compiler in limrhg.F90
18:32 Ticket #753 (compilation with AGRIF) created by rblod: The v3_3_beta as it was after the merge party didn't compile with agrif. …
16:00 Changeset [2355] by flavoni: remove useless comments, see ticket #752
15:40 Changeset [2354] by flavoni: first draft for SETTE (SET tests for NEMO), a new version of NVTK, see ticket #752
15:35 Ticket #752 (first draft for new NVTK : SET TEsts for nemo (SETTE)) created by flavoni: It is only a first draft to start new set of tests for NEMO. Used …
15:09 2010WP/2010from Merge Party To Version3.3 edited by clevy: (diff)
15:05 2010WP/2010from Merge Party To Version3.3 edited by clevy: (diff)
14:47 2010WP/2010from Merge Party To Version3.3 edited by clevy: (diff)
14:36 2010WP/2010from Merge Party To Version3.3 edited by clevy: (diff)
12:20 Ticket #745 (shift in time in fldread) closed by smasson: fixed: done for nemo_v3_3_beta in Changeset r2353 see Ticket #751
12:19 Ticket #751 (cleaning/debug of fldread) closed by smasson: fixed: done, see Changeset r2353
12:18 Changeset [2353] by smasson: nemo_v3_3_beta: cleaning/debug fldread, see Ticket #751
12:17 Ticket #751 (cleaning/debug of fldread) created by smasson: * weekly files now work properly * correct svn merge error (from …

2010-11-03:

13:55 Changeset [2352] by sga: NEMO branch nemo_v3_3_beta
Add NOCS tools based on SCRIP package for creating weights for interpolation on the fly
These now should build with the maketools script in the TOOLS directory using the same
architecture configuration file as the model (hopefully)
13:48 2011WP/2011Action_institutions_Met_Office edited by djlea: (diff)

2010-11-02:

12:01 2011WP/2011Action_institutions_Met_Office edited by endaodea: (diff)
11:59 2011WP/2011Action_institutions_Met_Office edited by endaodea: (diff)
08:09 Changeset [2351] by sga: NEMO branch nemo_v3_3_beta
modify interpolation on the fly scheme within fldread.F90.
Instead of attempting to decide on cyclicity of input non-model grid by inspecting a longitude variable,
fld_read now expects to find an attribute in the input weights file to tell it how many columns overlap
at the east-west edges of the grid.
iom and iom_nf90.F90 have new routines to expose netcdf attributes to the model.

2010-11-01:

17:44 Changeset [2350] by rfurner: correction to river scheme to restore conservation of heat and salt
15:21 Changeset [2349] by gm: v3.3beta: #658 phasing of the doc - key check + many minor changes

2010-10-31:

10:36 Ticket #750 (Remove diahdy from v3.3 beta) closed by gm: fixed
10:36 Changeset [2348] by gm: v3.3beta: #750 suppression of diahdy
10:35 Ticket #750 (Remove diahdy from v3.3 beta) created by gm: diahdy is a very old option introduced in OPA in the early 90. It …
10:05 Ticket #749 (Remove diagap from v3.3 beta) closed by gm: fixed
10:04 Changeset [2347] by gm: v3.3beta: #749 suppression of diagap
10:03 Ticket #749 (Remove diagap from v3.3 beta) created by gm: diagap is a very old option I have introduced in OPA in the early 90. It …

2010-10-29:

18:21 Changeset [2346] by gm: v3.3beta: zdfgls compilation error + use of key_esopa in zdfbfr
18:08 Changeset [2345] by gm: v3.3beta: FLO-compilation errors (to be done also on v3.2 \!)
17:12 2011WP/2011Action_institutions_Met_Office edited by catherine.guiavarch: (diff)
17:09 2011WP/2011Action_institutions_Met_Office edited by catherine.guiavarch: (diff)
15:25 Changeset [2344] by gm: v3.3beta: Suppress obsolete key_mpp_omp
15:21 Changeset [2343] by sga: NEMO branch nemo_v3_3_beta
Add FCM arch file for NOCS cluster nautilus
14:30 Changeset [2342] by rblod: Change key_off_tra to key_offline in agrif routines
14:28 2011WP/2011Action_institutions_Met_Office edited by idcatukmo: (diff)
13:50 Changeset [2341] by rblod: Correct typo error in lib_fortran
12:58 2011WP/2011Action_institutions_Met_Office edited by endaodea: Added task for Diffusion ops in S-Coords (diff)
12:18 Changeset [2340] by rblod: Add immediate send by default and key_nproci=1 key_nprocj=1 to avoid to add it each time, remove obsolete keys
11:06 Changeset [2339] by rblod: Correct a bug in rev2335 supposed to be only an innocent suppression of cpp keys ; I will definitely dedicate my day to read SVN book and find a way to allow Gurvan to commit only in DOC directory
10:45 Changeset [2338] by rblod: Fix pb with vvl and time splitting, see ticket #748
10:43 Ticket #748 (dynspg_ts and vvl) created by rblod: Current computation of zub/zvb is now wrong in dynspg_ts since fse3u_b and …
10:33 Changeset [2337] by rblod: Correct compilation error due to revision 2334 and suppression off key_trabbc ; I may humbly suggest it would be wiser to compile at least one configuration before doing a commit
10:19 2011WP/2011Action_institutions_Met_Office edited by davestorkey: (diff)
10:18 2011WP/2011Action_institutions_Met_Office edited by davestorkey: (diff)
10:14 2011WP/2011Action_institutions_Met_Office edited by davestorkey: (diff)
09:49 Changeset [2336] by davestorkey: Update namelists under CONFIG for BDY changes.
09:39 Changeset [2335] by gm: v3.3beta: Suppress obsolete key_mpp_shmem
08:41 Ticket #747 (fldread indexing error for interpolation on the fly) closed by sga: fixed: fixed at NEMO branch nemo_v3_3_beta revision 2330
08:37 Ticket #747 (fldread indexing error for interpolation on the fly) created by sga: jk has been used to index the fy_dta array in fld_interp (fldread.F90), …
08:15 Changeset [2334] by gm: v3.3beta: Suppress of trabbc in diahsb

2010-10-28:

23:10 Changeset [2333] by rblod: Add missing lwp in some advection routines
19:44 Changeset [2332] by rblod: correct small bugs in LIM2, see ticket #746
19:43 Ticket #746 (compilation error for lim2) created by rblod: Two small bugs in LIM2: a typo error in limdyn_2 and a key error in …
15:34 Changeset [2331] by rblod: Light improvement of maketools
13:21 Changeset [2330] by sga: NEMO branch nemo_v3_3_beta

bugfix: correct indexing of fly_dta array

for 3d interpolation on the fly, the third index should be a ":" to allow for 1 or jpk levels
12:21 Changeset [2329] by gm: v3.3beta: Suppress old keys (key_diaspr, key_flx…, key_vectopt_memory) & phasing of zdfgls interface
11:10 Changeset [2328] by cetlod: suppression of useless key_trabbc
11:08 Changeset [2327] by cetlod: improvment of the trends routine manager, trdtra.F90
11:06 Changeset [2326] by cetlod: correction of minor bugs on bio-optical retroaction when using PISCES
10:58 Changeset [2325] by cetlod: Improvment of trabbc.F90 routine ( by gm ) : dynamical allocation + suppression of key_trabbc

2010-10-27:

19:09 2011WP/2011Action_institutions_Met_Office edited by edblockley: (diff)
17:36 Changeset [2324] by flavoni: improve error message
16:26 Changeset [2323] by smasson: bugfix: temporal shift in fldread in the trunk, see ticket:745
16:24 Ticket #745 (shift in time in fldread) created by smasson: In fldread, calendar parameters (computed in daymod) are set at the middle …
15:32 Changeset [2322] by cbricaud: put modifications in namelist ice for new EVP rheology (lost during the merge)
15:20 Changeset [2321] by flavoni: correct a little mistake
15:20 2010WP/2010from Merge Party To Version3.3 edited by cbricaud: (diff)
15:19 Changeset [2320] by cbricaud: put modifications in namelist ice for new EVP rheology (lost during the merge)
15:18 Changeset [2319] by cbricaud: put new EVP rheology lost during the merge
15:16 Changeset [2318] by flavoni: change script to add and remove keys for new configurations and old ones
14:41 2011WP/2011Action_institutions_NOC edited by acc: (diff)
14:31 2011WP edited by acc: (diff)
14:30 2011WP edited by acc: (diff)
14:29 2011WP/2011Action_institutions_NOC edited by acc: Name changed from 2011WP/2011Action_institutions_NOCS to … (diff)
13:01 2011WP/2011Action_institutions_NOC edited by hliu: (diff)
13:00 2011WP/2011Action_institutions_NOC edited by hliu: (diff)
12:42 2011WP/2011Action_institutions_NOC edited by hliu: (diff)

2010-10-26:

18:22 2011WP/2011Action_institutions_NOC edited by acc

(diff)

18:04 Ticket #726 (Error in Qsr when using key_vvl) closed by cetlod

fixed

18:01 Changeset [2317] by cetlod

Improve the computation of the divergence of the downward solar irradiance in traqsr.F90, see ticket #726

change fsdepw & fse3t into fsdepw_0 & fse3t_0 in tra_qsr_init
modify tra_qsr to recompute systematically etot3 in vvl case
suppress the namelist parameter rn_si2 which is computed as the RGB longest depth of extinction in trc_oce.F90

16:26 Changeset [2316] by flavoni